RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 MPP6Q9NZW5 540 aa12.47□□□□□ -0.41
TPT1-201ENST00000309246 STAP1Q9ULZ2 295 aa12.47□□□□□ -0.41
TPT1-201ENST00000309246 CLCA2Q9UQC9 943 aa12.47□□□□□ -0.41
TPT1-201ENST00000309246 COL27A1Q8IZC6 1860 aaPredicted RBP12.46□□□□□ -0.41
TPT1-201ENST00000309246 IGSF10Q6WRI0 2623 aa12.46□□□□□ -0.41
TPT1-201ENST00000309246 CELSR3Q9NYQ7 3312 aa12.46□□□□□ -0.41
TPT1-201ENST00000309246 GTPBP10A4D1E9 387 aaKnown RBP12.46□□□□□ -0.41
TPT1-201ENST00000309246 FOXN3O00409 490 aaPredicted RBP12.46□□□□□ -0.41
TPT1-201ENST00000309246 BRINP1O60477 761 aa12.46□□□□□ -0.41
TPT1-201ENST00000309246 PCDH8O95206 1070 aa12.46□□□□□ -0.41
TPT1-201ENST00000309246 PRNPP04156 253 aa12.46□□□□□ -0.41
TPT1-201ENST00000309246 PRB1P04280 392 aa12.46□□□□□ -0.41
TPT1-201ENST00000309246 NUDT7P0C024 238 aa12.46□□□□□ -0.41
TPT1-201ENST00000309246 DGKAP23743 735 aa12.46□□□□□ -0.41
TPT1-201ENST00000309246 AKT2P31751 481 aa12.46□□□□□ -0.41
TPT1-201ENST00000309246 CXCR3P49682 368 aa12.46□□□□□ -0.41
TPT1-201ENST00000309246 CLDN2P57739 230 aa12.46□□□□□ -0.41
TPT1-201ENST00000309246 SNX16P57768 344 aa12.46□□□□□ -0.41
TPT1-201ENST00000309246 DEUP1Q05D60 604 aa12.46□□□□□ -0.41
TPT1-201ENST00000309246 KCNMA1Q12791 1236 aa12.46□□□□□ -0.41
TPT1-201ENST00000309246 ZNF211Q13398 564 aaPredicted RBP12.46□□□□□ -0.41
TPT1-201ENST00000309246 CAMK4Q16566 473 aa12.46□□□□□ -0.41
TPT1-201ENST00000309246 BRMS1LQ5PSV4 323 aa12.46□□□□□ -0.41
TPT1-201ENST00000309246 SEL1L3Q68CR1 1132 aa12.46□□□□□ -0.41
TPT1-201ENST00000309246 TMC6Q7Z403 805 aa12.46□□□□□ -0.41
TPT1-201ENST00000309246 DCBLD1Q8N8Z6 715 aa12.46□□□□□ -0.41
TPT1-201ENST00000309246 TMIEQ8NEW7 156 aa12.46□□□□□ -0.41
TPT1-201ENST00000309246 OR7D4Q8NG98 312 aa12.46□□□□□ -0.41
TPT1-201ENST00000309246 OR4C6Q8NH72 309 aa12.46□□□□□ -0.41
TPT1-201ENST00000309246 SNIP1Q8TAD8 396 aaKnown RBP12.46□□□□□ -0.41
TPT1-201ENST00000309246 RFFLQ8WZ73 363 aa12.46□□□□□ -0.41
TPT1-201ENST00000309246 UBL7Q96S82 380 aaPredicted RBP12.46□□□□□ -0.41
TPT1-201ENST00000309246 RRN3Q9NYV6 651 aa12.46□□□□□ -0.41
TPT1-201ENST00000309246 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.46□□□□□ -0.41
TPT1-201ENST00000309246 ZFR2Q9UPR6 939 aaKnown RBP12.46□□□□□ -0.41
TPT1-201ENST00000309246 RAI2Q9Y5P3 530 aa12.46□□□□□ -0.41
TPT1-201ENST00000309246 NBEAQ8NFP9 2946 aa12.46□□□□□ -0.42
TPT1-201ENST00000309246 RRP8O43159 456 aaKnown RBP12.45□□□□□ -0.42
TPT1-201ENST00000309246 PIAS2O75928 621 aa12.45□□□□□ -0.42
TPT1-201ENST00000309246 ENDOD1O94919 500 aa12.45□□□□□ -0.42
TPT1-201ENST00000309246 MT-CO3P00414 261 aa12.45□□□□□ -0.42
TPT1-201ENST00000309246 HNRNPA2B1P22626 353 aaKnown RBP12.45□□□□□ -0.42
TPT1-201ENST00000309246 CCDC173Q0VFZ6 552 aa12.45□□□□□ -0.42
TPT1-201ENST00000309246 HS1BP3Q53T59 392 aa12.45□□□□□ -0.42
TPT1-201ENST00000309246 FAM102AQ5T9C2 384 aaPredicted RBP12.45□□□□□ -0.42
TPT1-201ENST00000309246 NEK5Q6P3R8 708 aa12.45□□□□□ -0.42
TPT1-201ENST00000309246 LRRC31Q6UY01 552 aa12.45□□□□□ -0.42
TPT1-201ENST00000309246 GCNT7Q6ZNI0 430 aa12.45□□□□□ -0.42
TPT1-201ENST00000309246 DPY19L3Q6ZPD9 716 aa12.45□□□□□ -0.42
TPT1-201ENST00000309246 ERN2Q76MJ5 926 aaKnown RBP12.45□□□□□ -0.42
TPT1-201ENST00000309246 PTAR1Q7Z6K3 402 aaPredicted RBP12.45□□□□□ -0.42
TPT1-201ENST00000309246 SETD3Q86TU7 594 aaPredicted RBP12.45□□□□□ -0.42
TPT1-201ENST00000309246 ZDHHC17Q8IUH5 632 aa12.45□□□□□ -0.42
TPT1-201ENST00000309246 SLC22A18ASQ8N1D0 253 aa12.45□□□□□ -0.42
TPT1-201ENST00000309246 BAP1Q92560 729 aa12.45□□□□□ -0.42
TPT1-201ENST00000309246 ANP32EQ9BTT0 268 aa12.45□□□□□ -0.42
TPT1-201ENST00000309246 PDCL3Q9H2J4 239 aa12.45□□□□□ -0.42
TPT1-201ENST00000309246 PRORYQ9H606 182 aa12.45□□□□□ -0.42
TPT1-201ENST00000309246 KLHL11Q9NVR0 708 aa12.45□□□□□ -0.42
TPT1-201ENST00000309246 KIAA1468Q9P260 1216 aa12.45□□□□□ -0.42
TPT1-201ENST00000309246 IL36AQ9UHA7 158 aa12.45□□□□□ -0.42
TPT1-201ENST00000309246 PCDHB1Q9Y5F3 818 aa12.45□□□□□ -0.42
TPT1-201ENST00000309246 KIF26BQ2KJY2 2108 aa12.44□□□□□ -0.42
TPT1-201ENST00000309246 LRRK1Q38SD2 2015 aa12.44□□□□□ -0.42
TPT1-201ENST00000309246 DRGXA6NNA5 263 aa12.44□□□□□ -0.42
TPT1-201ENST00000309246 SRGAP2O75044 1071 aa12.44□□□□□ -0.42
TPT1-201ENST00000309246 LEFTY1O75610 366 aa12.44□□□□□ -0.42
TPT1-201ENST00000309246 GIMD1P0DJR0 217 aa12.44□□□□□ -0.42
TPT1-201ENST00000309246 MYF5P13349 255 aa12.44□□□□□ -0.42
TPT1-201ENST00000309246 OR1E1P30953 314 aa12.44□□□□□ -0.42
TPT1-201ENST00000309246 ACTN2P35609 894 aa12.44□□□□□ -0.42
TPT1-201ENST00000309246 FLT3P36888 993 aa12.44□□□□□ -0.42
TPT1-201ENST00000309246 RECQLP46063 649 aaPredicted RBP12.44□□□□□ -0.42
TPT1-201ENST00000309246 E2F1Q01094 437 aa12.44□□□□□ -0.42
TPT1-201ENST00000309246 CCDC15Q0P6D6 951 aa12.44□□□□□ -0.42
TPT1-201ENST00000309246 MAN2A1Q16706 1144 aa12.44□□□□□ -0.42
TPT1-201ENST00000309246 TPD52L1Q16890 204 aaPredicted RBP12.44□□□□□ -0.42
TPT1-201ENST00000309246 TBC1D25Q3MII6 688 aa12.44□□□□□ -0.42
TPT1-201ENST00000309246 TMEM259Q4ZIN3 620 aa12.44□□□□□ -0.42
TPT1-201ENST00000309246 C2CD6Q53TS8 623 aa12.44□□□□□ -0.42
TPT1-201ENST00000309246 ZNF542PQ5EBM4 170 aa12.44□□□□□ -0.42
TPT1-201ENST00000309246 ARTNQ5T4W7 220 aa12.44□□□□□ -0.42
TPT1-201ENST00000309246 TAF3Q5VWG9 929 aa12.44□□□□□ -0.42
TPT1-201ENST00000309246 TRNP1Q6NT89 227 aa12.44□□□□□ -0.42
TPT1-201ENST00000309246 FAM71AQ8IYT1 594 aa12.44□□□□□ -0.42
TPT1-201ENST00000309246 CACTIN-AS1Q8N1I8 211 aa12.44□□□□□ -0.42
TPT1-201ENST00000309246 TMEM35BQ8NCS4 154 aa12.44□□□□□ -0.42
TPT1-201ENST00000309246 FGF11Q92914 225 aa12.44□□□□□ -0.42
TPT1-201ENST00000309246 NT5C3BQ969T7 300 aa12.44□□□□□ -0.42
TPT1-201ENST00000309246 PGAP3Q96FM1 320 aaPredicted RBP12.44□□□□□ -0.42
TPT1-201ENST00000309246 PPP1R16AQ96I34 528 aa12.44□□□□□ -0.42
TPT1-201ENST00000309246 FCRL3Q96P31 734 aaPredicted RBP12.44□□□□□ -0.42
TPT1-201ENST00000309246 SPON2Q9BUD6 331 aa12.44□□□□□ -0.42
TPT1-201ENST00000309246 DNAJC28Q9NX36 388 aa12.44□□□□□ -0.42
TPT1-201ENST00000309246 WASF2Q9Y6W5 498 aa12.44□□□□□ -0.42
TPT1-201ENST00000309246 LAMA5O15230 3695 aa12.43□□□□□ -0.42
TPT1-201ENST00000309246 RP1P56715 2156 aa12.43□□□□□ -0.42
TPT1-201ENST00000309246 IGLV3-10A0A075B6K4 115 aa12.43□□□□□ -0.42
TPT1-201ENST00000309246 A6NNZ2 444 aa12.43□□□□□ -0.42
TPT1-201ENST00000309246 GOLGA8SH3BPF8 625 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms