RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 ARL6IP6Q8N6S5 226 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 OR5T2Q8NGG2 359 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 CAGE1Q8TC20 777 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 BCL7CQ8WUZ0 217 aaPredicted RBP1.29□□□□□ -2.2
CEP290-201ENST00000309041 PIH1D2Q8WWB5 315 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 TNFRSF25Q93038 417 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 UBE2FQ969M7 185 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 TMEM41AQ96HV5 264 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 DCLRE1CQ96SD1 692 aaKnown RBP1.29□□□□□ -2.2
CEP290-201ENST00000309041 TTPALQ9BTX7 342 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 ERVK-6Q9BXR3 956 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 NAPBQ9H115 298 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 CDIP1Q9H305 208 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 ARFGAP3Q9NP61 516 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 COPRSQ9NQ92 184 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 SLCO3A1Q9UIG8 710 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 DLGAP4Q9Y2H0 992 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 WDR19Q8NEZ3 1342 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 SALL1Q9NSC2 1324 aa1.29□□□□□ -2.2
CEP290-201ENST00000309041 PDZK1P1A8MUH7 402 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 KBTBD13C9JR72 458 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 ABCD4O14678 606 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 TRIM24O15164 1050 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 SCO2O43819 266 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 SLC28A2O43868 658 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 NCR1O76036 304 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 PRKD3O94806 890 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 C22orf31O95567 290 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 PRF1P14222 555 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 RAC2P15153 192 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 FSTP19883 344 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 GDI1P31150 447 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 SOX3P41225 446 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 SMARCB1Q12824 385 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 RALGDSQ12967 914 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 EBPQ15125 230 aaKnown RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 NTRK2Q16620 822 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 QPCTQ16769 361 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 SETMARQ53H47 684 aaPredicted RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 FBLN7Q53RD9 439 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 TYW3Q6IPR3 259 aaKnown RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 AFTPHQ6ULP2 937 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 SH2D5Q6ZV89 423 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 BTN2A1Q7KYR7 527 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 FAM35AQ86V20 835 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 ZNF354CQ86Y25 554 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 LINC00116Q8NCU8 138 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 LILRB1Q8NHL6 650 aaPredicted RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 SLC16A10Q8TF71 515 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 GIMAP1Q8WWP7 306 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 SCARF2Q96GP6 870 aaPredicted RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 SLC35E1Q96K37 410 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 HS3ST6Q96QI5 342 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 FRG2BQ96QU4 278 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 CDK5RAP1Q96SZ6 601 aaKnown RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 MYL10Q9BUA6 226 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 TRAF4Q9BUZ4 470 aaPredicted RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 PAPOLGQ9BWT3 736 aaKnown RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 MIXL1Q9H2W2 232 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 MBNL1Q9NR56 388 aaKnown RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 HOMER3Q9NSC5 361 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 PAK1IP1Q9NWT1 392 aaPredicted RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 HIF1ANQ9NWT6 349 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 EURLQ9NYK6 297 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 SERGEFQ9UGK8 458 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 KLHL3Q9UH77 587 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 TSPYL4Q9UJ04 414 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 GRID1Q9ULK0 1009 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 DOLKQ9UPQ8 538 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 LOXL2Q9Y4K0 774 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 SQORQ9Y6N5 450 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 CAPN7Q9Y6W3 813 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 UBR2Q8IWV8 1755 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 KANSL1LA0AUZ9 987 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 FABP12A6NFH5 140 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 RIPK2O43353 540 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 NUDT21O43809 227 aaKnown RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 IDH3BO43837 385 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 ZNF500O60304 480 aaPredicted RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 TBX19O60806 448 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 LRRN2O75325 713 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 H2AFYO75367 372 aaKnown RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 TAF5LO75529 589 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 JTBO76095 146 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 MICAL2O94851 1124 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 ZNF205O95201 554 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 AFPP02771 609 aaKnown RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 UGT2B4P06133 528 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 DAOP14920 347 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 MYOGP15173 224 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 CA6P23280 308 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 DDTP30046 118 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 DNAJA1P31689 397 aaKnown RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 AKT1P31749 480 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 MC4RP32245 332 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 RPS19P39019 145 aaKnown RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 GIPRP48546 466 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 NDUFV1P49821 464 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 APLP1P51693 650 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 CCNG1P51959 295 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms