RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 KCTD11Q693B1 232 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 TIGD7Q6NT04 549 aaPredicted RBP7.1□□□□□ -1.27
PTCD2-201ENST00000308077 TMC5Q6UXY8 1006 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 LEKR1Q6ZMV7 388 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 ANKMY2Q8IV38 441 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 LEMD2Q8NC56 503 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 ITFG1Q8TB96 612 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 WFDC5Q8TCV5 224 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 SMG7Q92540 1137 aaKnown RBP7.1□□□□□ -1.27
PTCD2-201ENST00000308077 ARL8AQ96BM9 186 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 TIFAQ96CG3 184 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 MRPL38Q96DV4 380 aaKnown RBP7.1□□□□□ -1.27
PTCD2-201ENST00000308077 OXNAD1Q96HP4 312 aaPredicted RBP7.1□□□□□ -1.27
PTCD2-201ENST00000308077 DDX50Q9BQ39 737 aaKnown RBP7.1□□□□□ -1.27
PTCD2-201ENST00000308077 ACBD3Q9H3P7 528 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 RETREG1Q9H6L5 497 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 SP110Q9HB58 689 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 PDFQ9HBH1 243 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 EIF2B3Q9NR50 452 aaKnown RBP7.1□□□□□ -1.27
PTCD2-201ENST00000308077 DONSONQ9NYP3 566 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 DPP7Q9UHL4 492 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 CDH22Q9UJ99 828 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 LSM7Q9UK45 103 aaKnown RBP7.1□□□□□ -1.27
PTCD2-201ENST00000308077 TRHDEQ9UKU6 1024 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 TBC1D30Q9Y2I9 924 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 SH3BP1Q9Y3L3 701 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 ACTL7AQ9Y615 435 aa7.1□□□□□ -1.27
PTCD2-201ENST00000308077 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.1□□□□□ -1.27
PTCD2-201ENST00000308077 MYLKQ15746 1914 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 E7EVH7 732 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 POLR3GO15318 223 aaPredicted RBP7.09□□□□□ -1.27
PTCD2-201ENST00000308077 LINC01565O15544 149 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 PRAMEF11O60813 436 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 GLDCP23378 1020 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 AVPR1AP37288 418 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 GPX6P59796 221 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 IL10RBQ08334 325 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 DMWDQ09019 674 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 SLC10A7Q0GE19 358 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 USP4Q13107 963 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 CBX2Q14781 532 aaPredicted RBP7.09□□□□□ -1.27
PTCD2-201ENST00000308077 GRIN2CQ14957 1233 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 ZNF77Q15935 545 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 TTMPQ5BVD1 217 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 FSCBQ5H9T9 825 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 CEP85LQ5SZL2 805 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 TTC39BQ5VTQ0 682 aaPredicted RBP7.09□□□□□ -1.27
PTCD2-201ENST00000308077 ITPRIPL1Q6GPH6 555 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 PPP1R21Q6ZMI0 780 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 ZNF354CQ86Y25 554 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 KLHDC8BQ8IXV7 354 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 PDIK1LQ8N165 341 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 MPP5Q8N3R9 675 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 CPXM2Q8N436 756 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.09□□□□□ -1.27
PTCD2-201ENST00000308077 HJURPQ8NCD3 748 aaPredicted RBP7.09□□□□□ -1.27
PTCD2-201ENST00000308077 FBXO36Q8NEA4 188 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 SPATA22Q8NHS9 363 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 FATE1Q969F0 183 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 PABPC5Q96DU9 382 aaKnown RBP7.09□□□□□ -1.27
PTCD2-201ENST00000308077 RUFY1Q96T51 708 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 MAGEH1Q9H213 219 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 IGFLR1Q9H665 355 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 SFXN1Q9H9B4 322 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 GLOD4Q9HC38 313 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 TDP1Q9NUW8 608 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 RBM22Q9NW64 420 aaKnown RBP eCLIP7.09□□□□□ -1.27
PTCD2-201ENST00000308077 PIH1D1Q9NWS0 290 aaKnown RBP7.09□□□□□ -1.27
PTCD2-201ENST00000308077 UBP1Q9NZI7 540 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 CHMP2BQ9UQN3 213 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 TEX264Q9Y6I9 313 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 MYOFQ9NZM1 2061 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.09□□□□□ -1.27
PTCD2-201ENST00000308077 E2F8A0AVK6 867 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 ILVBLA1L0T0 632 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 SUN1O94901 812 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 AP2A1O95782 977 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 MT-CYBP00156 380 aaPredicted RBP7.09□□□□□ -1.27
PTCD2-201ENST00000308077 RHOCP08134 193 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 MZF1P28698 734 aaPredicted RBP7.09□□□□□ -1.27
PTCD2-201ENST00000308077 ELK3P41970 407 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 LMAN1P49257 510 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 CDK16Q00536 496 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 TNK2Q07912 1038 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 HYAL1Q12794 435 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 ZNF177Q13360 481 aaPredicted RBP7.09□□□□□ -1.27
PTCD2-201ENST00000308077 HNRNPDQ14103 355 aaKnown RBP7.09□□□□□ -1.27
PTCD2-201ENST00000308077 ANO4Q32M45 955 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 RARS2Q5T160 578 aaKnown RBP7.09□□□□□ -1.27
PTCD2-201ENST00000308077 C6orf118Q5T5N4 469 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 RNF43Q68DV7 783 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 CAPN12Q6ZSI9 719 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 TPGS1Q6ZTW0 290 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 CEP128Q6ZU80 1094 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 SETD3Q86TU7 594 aaPredicted RBP7.09□□□□□ -1.27
PTCD2-201ENST00000308077 PGBD5Q8N414 524 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 CARNMT1Q8N4J0 409 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 TEX26Q8N6G2 289 aa7.09□□□□□ -1.27
PTCD2-201ENST00000308077 TDRD5Q8NAT2 981 aaKnown RBP7.09□□□□□ -1.27
PTCD2-201ENST00000308077 EPS8L3Q8TE67 593 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms