RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 C9orf72Q96LT7 481 aa13.07□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 NECTIN4Q96NY8 510 aa13.07□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 AGAP3Q96P47 875 aa13.07□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 CEP41Q9BYV8 373 aa13.07□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 KIF9Q9HAQ2 790 aa13.07□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 LRRC4CQ9HCJ2 640 aa13.07□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 DNAJC17Q9NVM6 304 aaKnown RBP13.07□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 RBM22Q9NW64 420 aaKnown RBP eCLIP13.07□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 NYNRINQ9P2P1 1898 aaKnown RBP13.07□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 AAR2Q9Y312 384 aaKnown RBP13.07□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 MYO18AQ92614 2054 aaKnown RBP13.07□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 TYW5A2RUC4 315 aaKnown RBP13.06□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 GOLGA6CA6NDK9 693 aa13.06□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 GOLGA8KD6RF30 607 aa13.06□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 H3BQF6 201 aa13.06□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 J3KR12 359 aa13.06□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 SCAMP3O14828 347 aaKnown RBP13.06□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 KDELR3O43731 214 aa13.06□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 ANXA9O76027 345 aa13.06□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 GSTA2P09210 222 aa13.06□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 GOLGA6DP0CG33 693 aa13.06□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 NFKB1P19838 968 aa13.06□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 SGSHP51688 502 aa13.06□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 RFTN1Q14699 578 aaPredicted RBP13.06□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 STAT4Q14765 748 aa13.06□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 BBS9Q3SYG4 887 aa13.06□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 MPPE1Q53F39 396 aa13.06□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 MARC1Q5VT66 337 aa13.06□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 CXorf57Q6NSI4 855 aaKnown RBP13.06□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 SIGLEC10Q96LC7 697 aa13.06□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 CCDC77Q9BR77 488 aa13.06□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 PPCSQ9HAB8 311 aa13.06□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 SP110Q9HB58 689 aa13.06□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 PDFQ9HBH1 243 aa13.06□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 TMBIM4Q9HC24 238 aa13.06□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 GOLGA6AQ9NYA3 693 aa13.06□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 SHROOM3Q8TF72 1996 aa13.06□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 A0A087WUV0 522 aaPredicted RBP13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 CXorf51AA0A1B0GTR3 108 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 TRDMT1O14717 391 aaKnown RBP13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 TSPAN3O60637 253 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 TBL1XO60907 577 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 SPAG6O75602 509 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 LUC7L3O95232 432 aaKnown RBP13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 ACSL3O95573 720 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 SHBGP04278 402 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 RHOCP08134 193 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 KCNA5P22460 613 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 HOXD9P28356 352 aaPredicted RBP13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 ACVRL1P37023 503 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 VIPR2P41587 438 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 MMP13P45452 471 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 LMAN1P49257 510 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 OXCT1P55809 520 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 IFFO1Q0D2I5 559 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 SMAD4Q13485 552 aaKnown RBP13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 FASTKD3Q14CZ7 662 aaKnown RBP13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 CEP85LQ5SZL2 805 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 FAM182AQ5T1J6 154 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 CYS1Q717R9 158 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 GOLGA6L1Q8N7Z2 621 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 TDRD5Q8NAT2 981 aaKnown RBP13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 ATP11CQ8NB49 1132 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 OTUB2Q96DC9 234 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 ZNF419Q96HQ0 510 aaPredicted RBP13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 WDR83Q9BRX9 315 aaKnown RBP13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 MLPHQ9BV36 600 aaPredicted RBP13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 SLC25A51Q9H1U9 297 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 LRRC40Q9H9A6 602 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 OBP2AQ9NY56 170 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 TBC1D14Q9P2M4 693 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 FETUBQ9UGM5 382 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 OR51B4Q9Y5P0 310 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 KIF26AQ9ULI4 1882 aaPredicted RBP13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 A0A0D9SEW6 157 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 SDR42E2A6NKP2 422 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 MBTPS2O43462 519 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 HLA-DQB2P05538 268 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 MYZAPP0CAP1 466 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 LAMP2P13473 410 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 ELK3P41970 407 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 GEMP55040 296 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 GPX6P59796 221 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 FAM193AP78312 1265 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 SLC10A7Q0GE19 358 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 UBAP2Q5T6F2 1119 aaKnown RBP13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 AGBL2Q5U5Z8 902 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 ARMC3Q5W041 872 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 ALG1LQ6GMV1 187 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 LINC00523Q86TU6 105 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 CCNJLQ8IV13 435 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 FBXO36Q8NEA4 188 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 OR52K2Q8NGK3 314 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 OR2W6PQ8NHA6 318 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 TADA1Q96BN2 335 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 PGM2Q96G03 612 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 NAT9Q9BTE0 207 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 CASS4Q9NQ75 786 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 VPS45Q9NRW7 570 aa13.05□□□□□ -0.32
SHANK2-AS3-201ENST00000307548 HAUS2Q9NVX0 235 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms