RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 Q9Y3F1 56 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 ZBBXA8MT70 800 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 SYNCRIPO60506 623 aaKnown RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 CRHR1P34998 444 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 ERFEQ4G0M1 354 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 PTRHD1Q6GMV3 140 aaKnown RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 SH3RF1Q7Z6J0 888 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 MICU2Q8IYU8 434 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 DEDD2Q8WXF8 326 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 OMA1Q96E52 524 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 GJD4Q96KN9 370 aaPredicted RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 DDX47Q9H0S4 455 aaKnown RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.07□□□□□ -1.76
USH2A-201ENST00000307340 AFF4Q9UHB7 1163 aaKnown RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 RAP2CQ9Y3L5 183 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 C21orf2O43822 256 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 TCF3P15923 654 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 IFNAR2P48551 515 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 PKNOX1P55347 436 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 SLC13A2Q13183 592 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 ZNF280DQ6N043 979 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 MCUQ8NE86 351 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 PORCNQ9H237 461 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 MGAT4DA6NG13 374 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 CCNT2O60583 730 aaKnown RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 SYTL3Q4VX76 610 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 MAEAQ7L5Y9 396 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 CREG2Q8IUH2 290 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 ARHGEF19Q8IW93 802 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 CYP2W1Q8TAV3 490 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 ORAI2Q96SN7 254 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 LRRC1Q9BTT6 524 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 THTPAQ9BU02 230 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 IDH3BO43837 385 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 CNPP09543 421 aaKnown RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 TIE1P35590 1138 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 EMC2Q15006 297 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 SEC23AQ15436 765 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 LRRC24Q50LG9 513 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 ILDR2Q71H61 639 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 NT5DC3Q86UY8 548 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 TDRD1Q9BXT4 1180 aaKnown RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 DPH5Q9H2P9 285 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 TRIM10Q9UDY6 481 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 FBXL21Q9UKT6 434 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 INPP5FQ9Y2H2 1132 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 MTF2Q9Y483 593 aaPredicted RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 STON1Q9Y6Q2 735 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 BAIAP3O94812 1187 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 GNAZP19086 355 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 HRH2P25021 359 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 DHFR2Q86XF0 187 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 BORCS5Q969J3 196 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 PITHD1Q9GZP4 211 aaPredicted RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 EHD3Q9NZN3 535 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 DUXAA6NLW8 204 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 PRKCBP05771 671 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 GSTT2BP0CG30 244 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 PROZP22891 400 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 ELP6Q0PNE2 266 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 CYP4A22Q5TCH4 519 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 OR6B2Q6IFH4 312 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 FAM174AQ8TBP5 190 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 BTF3L4Q96K17 158 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 ZBED2Q9BTP6 218 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 NUSAP1Q9BXS6 441 aaKnown RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 SIAEQ9HAT2 523 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 POPDC3Q9HBV1 291 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 LGALS13Q9UHV8 139 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 PHTF1Q9UMS5 762 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 ECE2O60344 883 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 APBA3O96018 575 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 NR2F6P10588 404 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 ADRA1DP25100 572 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 SOX9P48436 509 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 VBP1P61758 197 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 TRAF7Q6Q0C0 670 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 BEND5Q7L4P6 421 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 HIPK1Q86Z02 1210 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 SMYD4Q8IYR2 804 aaPredicted RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 SLC6A16Q9GZN6 736 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 SPDYE2BA6NHP3 402 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 UPP2O95045 317 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 OXSR1O95747 527 aaPredicted RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 EOMESO95936 686 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 SPDYE6P0CI01 402 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 GRK4P32298 578 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 CHN2P52757 468 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 CDH4P55283 916 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 PLEKHN1Q494U1 663 aaPredicted RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 ANO7Q6IWH7 933 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 ZNF549Q6P9A3 640 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 ZBTB49Q6ZSB9 765 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 OTOAQ7RTW8 1153 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 KDELC2Q7Z4H8 507 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 PPM1NQ8N819 430 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 NSMCE2Q96MF7 247 aa4.07□□□□□ -1.76
USH2A-201ENST00000307340 UNKLQ9H9P5 680 aaKnown RBP4.07□□□□□ -1.76
USH2A-201ENST00000307340 METTL5Q9NRN9 209 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms