RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 TM6SF2Q9BZW4 377 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 RSPH9Q9H1X1 276 aaPredicted RBP11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 TNKS2Q9H2K2 1166 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 DYRK4Q9NR20 520 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 SALL4Q9UJQ4 1053 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 GMEB2Q9UKD1 530 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 AMFRQ9UKV5 643 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 GUCA1BQ9UMX6 200 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 INVSQ9Y283 1065 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 DUSP10Q9Y6W6 482 aa11.21□□□□□ -0.61
CSPG4P1Y-201ENST00000306641 ABCA7Q8IZY2 2146 aa11.21□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 TP53BP1Q12888 1972 aaPredicted RBP11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 IGHV1OR15-9A0A0B4J2B8 117 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 CCDC66A2RUB6 948 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 GRID2IPA4D2P6 1211 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 APOL1O14791 398 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 MID1O15344 667 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 SMAD6O43541 496 aaKnown RBP11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 HRO43593 1189 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 MFSD11O43934 449 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PRAMEF11O60813 436 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PALMO75781 387 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 IGSF6O95976 241 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PRNPP04156 253 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 VAV1P15498 845 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 ZFXP17010 805 aaPredicted RBP11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 C5AR1P21730 350 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 CTNNA1P35221 906 aaKnown RBP11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 CETN2P41208 172 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 RPL6Q02878 288 aaKnown RBP11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 RAD51Q06609 339 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 IL10RBQ08334 325 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 RFTN1Q14699 578 aaPredicted RBP11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 LPAL2Q16609 132 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 INO80DQ53TQ3 878 aaPredicted RBP11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 AFMIDQ63HM1 303 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 NCBP2-AS2Q69YL0 99 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 LEKR1Q6ZMV7 388 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 LPCAT2Q7L5N7 544 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PEX26Q7Z412 305 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 KBTBD6Q86V97 674 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 ARHGAP12Q8IWW6 846 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 RNF10Q8N5U6 811 aaKnown RBP11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 UBL4BQ8N7F7 174 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PIP4K2CQ8TBX8 421 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 RAPGEF5Q92565 580 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 ISG20Q96AZ6 181 aaKnown RBP11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 RNF25Q96BH1 459 aaPredicted RBP11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 FAF2Q96CS3 445 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PPP1R16AQ96I34 528 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 GDAP1L1Q96MZ0 367 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 RNF157Q96PX1 679 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 OMDQ99983 421 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 CINPQ9BW66 212 aaPredicted RBP11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PABPC3Q9H361 631 aaKnown RBP11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 ZDHHC6Q9H6R6 413 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 ETNK2Q9NVF9 386 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 HAUS2Q9NVX0 235 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 USP36Q9P275 1121 aaKnown RBP11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 NCDNQ9UBB6 729 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 TRIM10Q9UDY6 481 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 IL36AQ9UHA7 158 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 IPO11Q9UI26 975 aaKnown RBP11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 MFHAS1Q9Y4C4 1052 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 MUC6Q6W4X9 2439 aa11.2□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 A0A1W2PP55 124 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PROB1E7EW31 1015 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 J3KR12 359 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 MCF2LO15068 1137 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 NEBLO76041 1014 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 ZRANB2O95218 330 aaKnown RBP eCLIP11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 GSRP00390 522 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 MX2P20592 715 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 IL4RP24394 825 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 CTNNA2P26232 953 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 CD6P30203 668 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 CHRNA3P32297 505 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 SLC8A1P32418 973 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 TPMTP51580 245 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 CCNHP51946 323 aaPredicted RBP11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 CCDC15Q0P6D6 951 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 TFDP2Q14188 446 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 ZNF235Q14590 738 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 NUMA1Q14980 2115 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PAFAH1B3Q15102 231 aaKnown RBP11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 MAP7D1Q3KQU3 841 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 CARD16Q5EG05 197 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 TFDP3Q5H9I0 405 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 TMCO4Q5TGY1 634 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 KAZNQ674X7 775 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 LAIR1Q6GTX8 287 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 TIGD7Q6NT04 549 aaPredicted RBP11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 USP30Q70CQ3 517 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 FAM124AQ86V42 546 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 LRRC49Q8IUZ0 686 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 KATNAL2Q8IYT4 538 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 FAM160A2Q8N612 972 aaPredicted RBP11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 NETO2Q8NC67 525 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 OR2AP1Q8NGE2 309 aa11.19□□□□□ -0.62
CSPG4P1Y-201ENST00000306641 PCDH19Q8TAB3 1148 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms