RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 FTHL17Q9BXU8 183 aa15.38■□□□□ 0.05
CSDC2-201ENST00000306149 ATXN3LQ9H3M9 355 aa15.38■□□□□ 0.05
CSDC2-201ENST00000306149 OXSMQ9NWU1 459 aa15.38■□□□□ 0.05
CSDC2-201ENST00000306149 ARHGAP26Q9UNA1 814 aa15.38■□□□□ 0.05
CSDC2-201ENST00000306149 GNEQ9Y223 722 aaKnown RBP15.38■□□□□ 0.05
CSDC2-201ENST00000306149 RUVBL2Q9Y230 463 aaKnown RBP15.38■□□□□ 0.05
CSDC2-201ENST00000306149 TTC3P53804 2025 aa15.38■□□□□ 0.05
CSDC2-201ENST00000306149 PIGNO95427 931 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 AHSGP02765 367 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 NUDT2P50583 147 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 AQP4P55087 323 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 POLE2P56282 527 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 GALNT2Q10471 571 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 ST13P4Q8IZP2 240 aaPredicted RBP15.37■□□□□ 0.05
CSDC2-201ENST00000306149 FBXW8Q8N3Y1 598 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 TMEM151AQ8N4L1 468 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 RNF148Q8N7C7 305 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 GDPD5Q8WTR4 605 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 HDAC11Q96DB2 347 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 ZNF419Q96HQ0 510 aaPredicted RBP15.37■□□□□ 0.05
CSDC2-201ENST00000306149 CENPKQ9BS16 269 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 ILKAPQ9H0C8 392 aaPredicted RBP15.37■□□□□ 0.05
CSDC2-201ENST00000306149 TLK1Q9UKI8 766 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 CASQ2O14958 399 aaPredicted RBP15.37■□□□□ 0.05
CSDC2-201ENST00000306149 TIMM44O43615 452 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 UQCRBP14927 111 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 LRPAP1P30533 357 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 INHBEP58166 350 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 MPP1Q00013 466 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 SCAPQ12770 1279 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 MSLNQ13421 630 aaPredicted RBP15.37■□□□□ 0.05
CSDC2-201ENST00000306149 TRIP10Q15642 601 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 LSM12Q3MHD2 195 aaKnown RBP15.37■□□□□ 0.05
CSDC2-201ENST00000306149 ARL13BQ3SXY8 428 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 FSCBQ5H9T9 825 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 NXNQ6DKJ4 435 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 ISLR2Q6UXK2 745 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 ZC3HC1Q86WB0 502 aaKnown RBP15.37■□□□□ 0.05
CSDC2-201ENST00000306149 SNX32Q86XE0 403 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 IPMKQ8NFU5 416 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 ZSCAN18Q8TBC5 510 aaPredicted RBP15.37■□□□□ 0.05
CSDC2-201ENST00000306149 NCSTNQ92542 709 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 SGF29Q96ES7 293 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 IL22Q9GZX6 179 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 ZDHHC2Q9UIJ5 367 aa15.37■□□□□ 0.05
CSDC2-201ENST00000306149 VAPBO95292 243 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 NPY2RP49146 381 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 GRM2Q14416 872 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 CCL14Q16627 93 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 LIN52Q52LA3 116 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 USP50Q70EL3 339 aaPredicted RBP15.36■□□□□ 0.05
CSDC2-201ENST00000306149 BHLHA9Q7RTU4 235 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 TAC4Q86UU9 113 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 EPAS1Q99814 870 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 CNGB3Q9NQW8 809 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 TMEM114B3SHH9 223 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 TMEM233B4DJY2 109 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 NCAM2O15394 837 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 CFLARO15519 480 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 CRYBB1P53674 252 aaPredicted RBP15.36■□□□□ 0.05
CSDC2-201ENST00000306149 CDH17Q12864 832 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 MED21Q13503 144 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 PCBP1Q15365 356 aaKnown RBP eCLIP15.36■□□□□ 0.05
CSDC2-201ENST00000306149 ITPRIPL1Q6GPH6 555 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 ZNF280DQ6N043 979 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 FSTL5Q8N475 847 aaPredicted RBP15.36■□□□□ 0.05
CSDC2-201ENST00000306149 HASPINQ8TF76 798 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 GTF3C2Q8WUA4 911 aaPredicted RBP15.36■□□□□ 0.05
CSDC2-201ENST00000306149 CATSPER2Q96P56 530 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 SPATA16Q9BXB7 569 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 C1QTNF1Q9BXJ1 281 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 SLC2A6Q9UGQ3 507 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 NUDT5Q9UKK9 219 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 HHLA1C9JL84 531 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 MATN2O00339 956 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 FBXO21O94952 628 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 CTSHP09668 335 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 SLC35E2BP0CK96 405 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 TFEBP19484 476 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 GLDCP23378 1020 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 BDNFP23560 247 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 PIK3R1P27986 724 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 NUMBP49757 651 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 MTTPP55157 894 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 DLG1Q12959 904 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 BIRC2Q13490 618 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 FRG1Q14331 258 aaKnown RBP15.36■□□□□ 0.05
CSDC2-201ENST00000306149 PDCD2Q16342 344 aaPredicted RBP15.36■□□□□ 0.05
CSDC2-201ENST00000306149 ANO4Q32M45 955 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 FAM219BQ5XKK7 198 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 ESRP1Q6NXG1 681 aaKnown RBP15.36■□□□□ 0.05
CSDC2-201ENST00000306149 CEP97Q8IW35 865 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 MFSD6LQ8IWD5 586 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 CCNYL1Q8N7R7 359 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 PTPN18Q99952 460 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 RTKNQ9BST9 563 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 MCMBPQ9BTE3 642 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 CPA4Q9UI42 421 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 TRHDEQ9UKU6 1024 aa15.36■□□□□ 0.05
CSDC2-201ENST00000306149 CLEC11AQ9Y240 323 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms