RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 CAPSQ13938 189 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 PTGR2Q8N8N7 351 aaPredicted RBP14.11□□□□□ -0.15
PRKCB-201ENST00000303531 OR5B17Q8NGF7 314 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 MRPS26Q9BYN8 205 aaKnown RBP14.11□□□□□ -0.15
PRKCB-201ENST00000303531 TNPO3Q9Y5L0 923 aaKnown RBP14.11□□□□□ -0.15
PRKCB-201ENST00000303531 PQBP1O60828 265 aaKnown RBP14.11□□□□□ -0.15
PRKCB-201ENST00000303531 COX7A2P14406 83 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 TSHRP16473 764 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 MAGEA10P43363 369 aaPredicted RBP14.11□□□□□ -0.15
PRKCB-201ENST00000303531 UBAP2LQ14157 1087 aaKnown RBP14.11□□□□□ -0.15
PRKCB-201ENST00000303531 TSNQ15631 228 aaKnown RBP14.11□□□□□ -0.15
PRKCB-201ENST00000303531 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.11□□□□□ -0.15
PRKCB-201ENST00000303531 ADAM2Q99965 735 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 REXO4Q9GZR2 422 aaKnown RBP14.11□□□□□ -0.15
PRKCB-201ENST00000303531 PPLO60437 1756 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 COL5A2P05997 1499 aaPredicted RBP14.11□□□□□ -0.15
PRKCB-201ENST00000303531 EPN2O95208 641 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 CYP2A6P11509 494 aaPredicted RBP14.11□□□□□ -0.15
PRKCB-201ENST00000303531 DGKAP23743 735 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 HNRNPH3P31942 346 aaKnown RBP14.11□□□□□ -0.15
PRKCB-201ENST00000303531 PTDSS1P48651 473 aaKnown RBP14.11□□□□□ -0.15
PRKCB-201ENST00000303531 ACSM2AQ08AH3 577 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 PDZK1Q5T2W1 519 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 TRIQKQ629K1 86 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 ACSM2BQ68CK6 577 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 MAML3Q96JK9 1138 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 HSFY1Q96LI6 401 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 FHDC1Q9C0D6 1143 aaPredicted RBP14.11□□□□□ -0.15
PRKCB-201ENST00000303531 ARMC7Q9H6L4 198 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 PACSIN3Q9UKS6 424 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 CD3EAPO15446 510 aaKnown RBP14.11□□□□□ -0.15
PRKCB-201ENST00000303531 SPATA31C1P0DKV0 1188 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 GRIA3P42263 894 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 ECM1Q16610 540 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 IQSEC1Q6DN90 963 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 ANKRD49Q8WVL7 239 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 DGCR6LQ9BY27 220 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 CDT1Q9H211 546 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 VPS45Q9NRW7 570 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 MAFO75444 373 aaPredicted RBP14.11□□□□□ -0.15
PRKCB-201ENST00000303531 CCNB1P14635 433 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 GUCA1AP43080 201 aaPredicted RBP14.11□□□□□ -0.15
PRKCB-201ENST00000303531 TAS2R40P59535 323 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 BBS12Q6ZW61 710 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 ZNF605Q86T29 641 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 VMP1Q96GC9 406 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 FAM192AQ9GZU8 254 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 GOT1P17174 413 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 ATP5F1P24539 256 aaPredicted RBP14.11□□□□□ -0.15
PRKCB-201ENST00000303531 KLRC2P26717 231 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 TUFMP49411 452 aaKnown RBP14.11□□□□□ -0.15
PRKCB-201ENST00000303531 SQLEQ14534 574 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 TAF5Q15542 800 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 MAGEE2Q8TD90 523 aaPredicted RBP14.11□□□□□ -0.15
PRKCB-201ENST00000303531 NDNQ99608 321 aa14.11□□□□□ -0.15
PRKCB-201ENST00000303531 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.11□□□□□ -0.156e-7■■■□□ 15
PRKCB-201ENST00000303531 KPNA4O00629 521 aaPredicted RBP14.1□□□□□ -0.15
PRKCB-201ENST00000303531 ACADMP11310 421 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 CYP2C18P33260 490 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 COX10Q12887 443 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 DGUOKQ16854 277 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 RAP1GAP2Q684P5 730 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 CATSPERGQ6ZRH7 1159 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 PIGZQ86VD9 579 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 RIOX2Q8IUF8 465 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 BBS4Q96RK4 519 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 ZNF670Q9BS34 389 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 CEP44Q9C0F1 390 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 BTBD7Q9P203 1132 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 PRKAG3Q9UGI9 489 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 ENTPD5O75356 428 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 C21orf59P57076 290 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 AMPD2Q01433 879 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 EML3Q32P44 896 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 MAP1SQ66K74 1059 aaPredicted RBP14.1□□□□□ -0.15
PRKCB-201ENST00000303531 ARCQ7LC44 396 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 RD3Q7Z3Z2 195 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 FAM45AQ8TCE6 357 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 SPRTNQ9H040 489 aaPredicted RBP14.1□□□□□ -0.15
PRKCB-201ENST00000303531 SPG21Q9NZD8 308 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 OPLAHO14841 1288 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 PEX11AO75192 247 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 DDR1Q08345 913 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 CAMK1DQ8IU85 385 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 IL31RAQ8NI17 732 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 REXO2Q9Y3B8 237 aaKnown RBP14.1□□□□□ -0.15
PRKCB-201ENST00000303531 ARHGAP23Q9P227 1491 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 FSCN2O14926 492 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 KRT36O76013 467 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 SNRPB2P08579 225 aaKnown RBP14.1□□□□□ -0.15
PRKCB-201ENST00000303531 FAM187BQ17R55 369 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 STXBP5Q5T5C0 1151 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 ZNF398Q8TD17 642 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 STARD8Q92502 1023 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 OMDQ99983 421 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 MRPL9Q9BYD2 267 aaKnown RBP14.1□□□□□ -0.15
PRKCB-201ENST00000303531 GLIS2Q9BZE0 524 aaPredicted RBP14.1□□□□□ -0.15
PRKCB-201ENST00000303531 ACSS3Q9H6R3 686 aa14.1□□□□□ -0.15
PRKCB-201ENST00000303531 UXTQ9UBK9 157 aaPredicted RBP14.1□□□□□ -0.15
PRKCB-201ENST00000303531 GGA2Q9UJY4 613 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms