RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 CRYL1Q9Y2S2 319 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 SHOX2O60902 331 aaPredicted RBP7.74□□□□□ -1.17
SF3B3-201ENST00000302516 FARP2O94887 1054 aaPredicted RBP7.74□□□□□ -1.17
SF3B3-201ENST00000302516 TTPAP49638 278 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 AIF1P55008 147 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 GMFBP60983 142 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 LPIN1Q14693 890 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 SLC9A5Q14940 896 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 TYSND1Q2T9J0 566 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 ALFQ53S48 1182 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 R3HCC1LQ7Z5L2 792 aaKnown RBP7.74□□□□□ -1.17
SF3B3-201ENST00000302516 ZNF671Q8TAW3 534 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 USP7Q93009 1102 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 ZCWPW1Q9H0M4 648 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 SSU72Q9NP77 194 aaKnown RBP7.74□□□□□ -1.17
SF3B3-201ENST00000302516 PNPLA8Q9NP80 782 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 PRKAG3Q9UGI9 489 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 ZNF112Q9UJU3 913 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 GTF2A1LQ9UNN4 478 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 FAM92AA1XBS5 289 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 JCHAINP01591 159 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 PHACTR4Q8IZ21 702 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 PNPT1Q8TCS8 783 aaKnown RBP7.74□□□□□ -1.17
SF3B3-201ENST00000302516 CCDC167Q9P0B6 97 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 TRPC4Q9UBN4 977 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 AXIN2Q9Y2T1 843 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 RAP2CQ9Y3L5 183 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 BAZ2AQ9UIF9 1905 aaKnown RBP7.74□□□□□ -1.17
SF3B3-201ENST00000302516 LOC100506127A0A0U1RQW1 187 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 C6orf222P0C671 652 aaPredicted RBP7.74□□□□□ -1.17
SF3B3-201ENST00000302516 TKTL1P51854 596 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 ATP12AP54707 1039 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 EPHB3P54753 998 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 MAMLD1Q13495 774 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 MARCH10Q8NA82 808 aaPredicted RBP7.74□□□□□ -1.17
SF3B3-201ENST00000302516 ZSCAN18Q8TBC5 510 aaPredicted RBP7.74□□□□□ -1.17
SF3B3-201ENST00000302516 FAM124BQ9H5Z6 455 aaPredicted RBP7.74□□□□□ -1.17
SF3B3-201ENST00000302516 SLC22A2O15244 555 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 LIASO43766 372 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 EPB42P16452 691 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 FAUP35544 74 aaKnown RBP7.74□□□□□ -1.17
SF3B3-201ENST00000302516 GTF2A2P52657 109 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 FOLH1Q04609 750 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 FAAP100Q0VG06 881 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 CYP2A13Q16696 494 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 IZUMO1Q8IYV9 350 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 ZFP28Q8NHY6 868 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 C1QTNF7Q9BXJ2 289 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 EURLQ9NYK6 297 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 IKZF3Q9UKT9 509 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 VPS4AQ9UN37 437 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 DCCP43146 1447 aa7.74□□□□□ -1.17
SF3B3-201ENST00000302516 HAT1O14929 419 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 ATP5F1P24539 256 aaPredicted RBP7.73□□□□□ -1.17
SF3B3-201ENST00000302516 HNRNPH3P31942 346 aaKnown RBP7.73□□□□□ -1.17
SF3B3-201ENST00000302516 AUHQ13825 339 aaKnown RBP7.73□□□□□ -1.17
SF3B3-201ENST00000302516 ZSWIM7Q19AV6 140 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 FGD3Q5JSP0 725 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 MFSD7Q6UXD7 560 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 TBC1D21Q8IYX1 336 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 ANKRD13AQ8IZ07 590 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 ZNF655Q8N720 491 aaPredicted RBP7.73□□□□□ -1.17
SF3B3-201ENST00000302516 POU5F2Q8N7G0 328 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 ZNF606Q8WXB4 792 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 TRMOQ9BU70 441 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 SEMA6AQ9H2E6 1030 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 DPP7Q9UHL4 492 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 GMPPBQ9Y5P6 360 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 DHRS12A0PJE2 317 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 S100GP29377 79 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 ZNF143P52747 638 aaPredicted RBP7.73□□□□□ -1.17
SF3B3-201ENST00000302516 PSME3P61289 254 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 COPZ1P61923 177 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 SREBF2Q12772 1141 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 SV2AQ7L0J3 742 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 METTL6Q8TCB7 284 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 MRPS31Q92665 395 aaKnown RBP7.73□□□□□ -1.17
SF3B3-201ENST00000302516 SLC35C1Q96A29 364 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 POPDC2Q9HBU9 364 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 MYOZ2Q9NPC6 264 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 ZNF446Q9NWS9 450 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 DNAJC28Q9NX36 388 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 R3HDM2Q9Y2K5 976 aaKnown RBP7.73□□□□□ -1.17
SF3B3-201ENST00000302516 QSOX1O00391 747 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 VAPBO95292 243 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 PGM3O95394 542 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 CYP3A4P08684 503 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 ACO1P21399 889 aaKnown RBP7.73□□□□□ -1.17
SF3B3-201ENST00000302516 KDELR1P24390 212 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 GRIA3P42263 894 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 OR1G1P47890 313 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 TBX4P57082 545 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 GALNT18Q6P9A2 607 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 AFTPHQ6ULP2 937 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 PAGE2Q7Z2X7 111 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 LEMD2Q8NC56 503 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 ADCY4Q8NFM4 1077 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 DHX33Q9H6R0 707 aaKnown RBP7.73□□□□□ -1.17
SF3B3-201ENST00000302516 ZFYVE28Q9HCC9 887 aa7.73□□□□□ -1.17
SF3B3-201ENST00000302516 SIK3Q9Y2K2 1263 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms