RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 TMIEQ8NEW7 156 aa11.5□□□□□ -0.57
CLCC1-201ENST00000302500 OR2T34Q8NGX1 318 aa11.5□□□□□ -0.57
CLCC1-201ENST00000302500 PIP4K2CQ8TBX8 421 aa11.5□□□□□ -0.57
CLCC1-201ENST00000302500 TSC1Q92574 1164 aa11.5□□□□□ -0.57
CLCC1-201ENST00000302500 TBC1D31Q96DN5 1066 aa11.5□□□□□ -0.57
CLCC1-201ENST00000302500 IQCDQ96DY2 449 aa11.5□□□□□ -0.57
CLCC1-201ENST00000302500 NSMCE3Q96MG7 304 aa11.5□□□□□ -0.57
CLCC1-201ENST00000302500 THAP2Q9H0W7 228 aa11.5□□□□□ -0.57
CLCC1-201ENST00000302500 MUC3BQ9H195 1237 aa11.5□□□□□ -0.57
CLCC1-201ENST00000302500 MAGEH1Q9H213 219 aa11.5□□□□□ -0.57
CLCC1-201ENST00000302500 IL21RQ9HBE5 538 aa11.5□□□□□ -0.57
CLCC1-201ENST00000302500 GPR27Q9NS67 375 aa11.5□□□□□ -0.57
CLCC1-201ENST00000302500 CNOT8Q9UFF9 292 aaKnown RBP11.5□□□□□ -0.57
CLCC1-201ENST00000302500 COL27A1Q8IZC6 1860 aaPredicted RBP11.5□□□□□ -0.57
CLCC1-201ENST00000302500 LRP4O75096 1905 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 BCAT2O15382 392 aaPredicted RBP11.49□□□□□ -0.57
CLCC1-201ENST00000302500 NDUFS2O75306 463 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 DKK1O94907 266 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 PEX11BO96011 259 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 SERPING1P05155 500 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 ZNF883P0CG24 379 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 MYBL1P10243 752 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 IL4RP24394 825 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 CD27P26842 260 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 MIPP30301 263 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 HTR7P34969 479 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 CTSKP43235 329 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 GRIA4P48058 902 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 PSMD8P48556 350 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 ARSEP51690 589 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 FAM193AP78312 1265 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 SLC20A2Q08357 652 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 DPYSQ14117 519 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 ARL13BQ3SXY8 428 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 TTC31Q49AM3 519 aaPredicted RBP11.49□□□□□ -0.57
CLCC1-201ENST00000302500 SARM1Q6SZW1 724 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 LAYNQ6UX15 382 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 RABEPKQ7Z6M1 372 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 PSTKQ8IV42 348 aaKnown RBP11.49□□□□□ -0.57
CLCC1-201ENST00000302500 HDDC3Q8N4P3 179 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 MINDY1Q8N5J2 469 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 TMEM145Q8NBT3 493 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 PPP1R9BQ96SB3 815 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 KCTD15Q96SI1 283 aaPredicted RBP11.49□□□□□ -0.57
CLCC1-201ENST00000302500 TMEM121BQ9BXQ6 578 aaPredicted RBP11.49□□□□□ -0.57
CLCC1-201ENST00000302500 NUSAP1Q9BXS6 441 aaKnown RBP11.49□□□□□ -0.57
CLCC1-201ENST00000302500 KDM4CQ9H3R0 1056 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 SEPT11Q9NVA2 429 aaKnown RBP11.49□□□□□ -0.57
CLCC1-201ENST00000302500 GPATCH2LQ9NWQ4 482 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 SUSD2Q9UGT4 822 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 DNAI1Q9UI46 699 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 SLC25A13Q9UJS0 675 aa11.49□□□□□ -0.57
CLCC1-201ENST00000302500 BZW2Q9Y6E2 419 aaKnown RBP11.49□□□□□ -0.57
CLCC1-201ENST00000302500 KDELR3O43731 214 aa11.48□□□□□ -0.57
CLCC1-201ENST00000302500 CHRNA3P32297 505 aa11.48□□□□□ -0.57
CLCC1-201ENST00000302500 PCK1P35558 622 aa11.48□□□□□ -0.57
CLCC1-201ENST00000302500 HCAR3P49019 387 aa11.48□□□□□ -0.57
CLCC1-201ENST00000302500 KRT83P78385 493 aa11.48□□□□□ -0.57
CLCC1-201ENST00000302500 SERINC3Q13530 473 aa11.48□□□□□ -0.57
CLCC1-201ENST00000302500 DPYSL2Q16555 572 aa11.48□□□□□ -0.57
CLCC1-201ENST00000302500 ZNF423Q2M1K9 1284 aa11.48□□□□□ -0.57
CLCC1-201ENST00000302500 TMEM259Q4ZIN3 620 aa11.48□□□□□ -0.57
CLCC1-201ENST00000302500 SYCP2LQ5T4T6 812 aa11.48□□□□□ -0.57
CLCC1-201ENST00000302500 N4BP2L1Q5TBK1 243 aaPredicted RBP11.48□□□□□ -0.57
CLCC1-201ENST00000302500 KANSL1Q7Z3B3 1105 aa11.48□□□□□ -0.57
CLCC1-201ENST00000302500 TRIM69Q86WT6 500 aa11.48□□□□□ -0.57
CLCC1-201ENST00000302500 CCDC117Q8IWD4 279 aaPredicted RBP11.48□□□□□ -0.57
CLCC1-201ENST00000302500 TP53INP2Q8IXH6 220 aa11.48□□□□□ -0.57
CLCC1-201ENST00000302500 PCDH20Q8N6Y1 951 aaKnown RBP11.48□□□□□ -0.57
CLCC1-201ENST00000302500 OR8D1Q8WZ84 308 aa11.48□□□□□ -0.57
CLCC1-201ENST00000302500 ZNF653Q96CK0 615 aa11.48□□□□□ -0.57
CLCC1-201ENST00000302500 HMCESQ96FZ2 354 aa11.48□□□□□ -0.57
CLCC1-201ENST00000302500 PACSIN1Q9BY11 444 aa11.48□□□□□ -0.57
CLCC1-201ENST00000302500 HDAC8Q9BY41 377 aa11.48□□□□□ -0.57
CLCC1-201ENST00000302500 TNKS2Q9H2K2 1166 aa11.48□□□□□ -0.57
CLCC1-201ENST00000302500 ATP13A1Q9HD20 1204 aa11.48□□□□□ -0.57
CLCC1-201ENST00000302500 LHX3Q9UBR4 397 aa11.48□□□□□ -0.57
CLCC1-201ENST00000302500 AP4E1Q9UPM8 1137 aa11.48□□□□□ -0.57
CLCC1-201ENST00000302500 ZFR2Q9UPR6 939 aaKnown RBP11.48□□□□□ -0.57
CLCC1-201ENST00000302500 FNDC3AQ9Y2H6 1198 aaKnown RBP11.48□□□□□ -0.57
CLCC1-201ENST00000302500 FCF1Q9Y324 198 aaKnown RBP11.48□□□□□ -0.57
CLCC1-201ENST00000302500 MFHAS1Q9Y4C4 1052 aa11.48□□□□□ -0.57
CLCC1-201ENST00000302500 SHROOM3Q8TF72 1996 aa11.47□□□□□ -0.57
CLCC1-201ENST00000302500 EIF3CLB5ME19 914 aaKnown RBP11.47□□□□□ -0.57
CLCC1-201ENST00000302500 CBX4O00257 560 aa11.47□□□□□ -0.57
CLCC1-201ENST00000302500 VILLO15195 856 aa11.47□□□□□ -0.57
CLCC1-201ENST00000302500 ZBTB24O43167 697 aaPredicted RBP11.47□□□□□ -0.57
CLCC1-201ENST00000302500 RNASEH2AO75792 299 aaKnown RBP11.47□□□□□ -0.57
CLCC1-201ENST00000302500 IL1BP01584 269 aa11.47□□□□□ -0.57
CLCC1-201ENST00000302500 CFIP05156 583 aa11.47□□□□□ -0.57
CLCC1-201ENST00000302500 PSMA2P25787 234 aa11.47□□□□□ -0.57
CLCC1-201ENST00000302500 EPHB2P29323 1055 aa11.47□□□□□ -0.57
CLCC1-201ENST00000302500 CSNK1EP49674 416 aaKnown RBP11.47□□□□□ -0.57
CLCC1-201ENST00000302500 CCNHP51946 323 aaPredicted RBP11.47□□□□□ -0.57
CLCC1-201ENST00000302500 YBEYP58557 167 aaPredicted RBP11.47□□□□□ -0.57
CLCC1-201ENST00000302500 RACK1P63244 317 aaKnown RBP11.47□□□□□ -0.57
CLCC1-201ENST00000302500 SHC2P98077 582 aa11.47□□□□□ -0.57
CLCC1-201ENST00000302500 SLC14A1Q13336 389 aa11.47□□□□□ -0.57
CLCC1-201ENST00000302500 FGL2Q14314 439 aa11.47□□□□□ -0.57
CLCC1-201ENST00000302500 ACAP1Q15027 740 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms