RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 CBX4O00257 560 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 PSMD3O43242 534 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 KDELR3O43731 214 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 MT-CYBP00156 380 aaPredicted RBP13.22□□□□□ -0.29
CCDC7-202ENST00000302316 GLDCP23378 1020 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 SSTR1P30872 391 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 GEMP55040 296 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 GPX6P59796 221 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 TTMPQ5BVD1 217 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 TCEAL5Q5H9L2 206 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 OR52K1Q8NGK4 314 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 WFDC5Q8TCV5 224 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 EPS8L3Q8TE67 593 aaKnown RBP13.22□□□□□ -0.29
CCDC7-202ENST00000302316 CFAP36Q96G28 342 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 ACE2Q9BYF1 805 aaPredicted RBP13.22□□□□□ -0.29
CCDC7-202ENST00000302316 SLC25A51Q9H1U9 297 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 TMBIM4Q9HC24 238 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 UBA2Q9UBT2 640 aaPredicted RBP13.22□□□□□ -0.29
CCDC7-202ENST00000302316 ZC3H7BQ9UGR2 993 aaKnown RBP13.22□□□□□ -0.29
CCDC7-202ENST00000302316 MAD1L1Q9Y6D9 718 aa13.22□□□□□ -0.29
CCDC7-202ENST00000302316 TLDC2A0PJX2 215 aa13.21□□□□□ -0.29
CCDC7-202ENST00000302316 GLP2RO95838 553 aa13.21□□□□□ -0.29
CCDC7-202ENST00000302316 IVLP07476 585 aa13.21□□□□□ -0.29
CCDC7-202ENST00000302316 TSHRP16473 764 aa13.21□□□□□ -0.29
CCDC7-202ENST00000302316 CSKP41240 450 aa13.21□□□□□ -0.29
CCDC7-202ENST00000302316 SLCO1A2P46721 670 aa13.21□□□□□ -0.29
CCDC7-202ENST00000302316 TNK2Q07912 1038 aa13.21□□□□□ -0.29
CCDC7-202ENST00000302316 HYAL1Q12794 435 aa13.21□□□□□ -0.29
CCDC7-202ENST00000302316 STAT4Q14765 748 aa13.21□□□□□ -0.29
CCDC7-202ENST00000302316 LONRF1Q17RB8 773 aa13.21□□□□□ -0.29
CCDC7-202ENST00000302316 MPP7Q5T2T1 576 aa13.21□□□□□ -0.29
CCDC7-202ENST00000302316 NAPEPLDQ6IQ20 393 aa13.21□□□□□ -0.29
CCDC7-202ENST00000302316 POTEHQ6S545 545 aa13.21□□□□□ -0.29
CCDC7-202ENST00000302316 CHRDL2Q6WN34 429 aa13.21□□□□□ -0.29
CCDC7-202ENST00000302316 C3orf62Q6ZUJ4 267 aa13.21□□□□□ -0.29
CCDC7-202ENST00000302316 CROCCP2Q86T23 111 aa13.21□□□□□ -0.29
CCDC7-202ENST00000302316 KLHDC8BQ8IXV7 354 aa13.21□□□□□ -0.29
CCDC7-202ENST00000302316 BBS5Q8N3I7 341 aa13.21□□□□□ -0.29
CCDC7-202ENST00000302316 MPP5Q8N3R9 675 aa13.21□□□□□ -0.29
CCDC7-202ENST00000302316 DNAAF3Q8N9W5 541 aa13.21□□□□□ -0.29
CCDC7-202ENST00000302316 IPMKQ8NFU5 416 aa13.21□□□□□ -0.29
CCDC7-202ENST00000302316 SIGLEC10Q96LC7 697 aa13.21□□□□□ -0.29
CCDC7-202ENST00000302316 CCDC77Q9BR77 488 aa13.21□□□□□ -0.29
CCDC7-202ENST00000302316 TMEM109Q9BVC6 243 aa13.21□□□□□ -0.29
CCDC7-202ENST00000302316 BCCIPQ9P287 314 aaKnown RBP eCLIP13.21□□□□□ -0.29
CCDC7-202ENST00000302316 VPS28Q9UK41 221 aa13.21□□□□□ -0.29
CCDC7-202ENST00000302316 EXOC1LA0A1B0GW35 172 aa13.21□□□□□ -0.3
CCDC7-202ENST00000302316 RASGRF2O14827 1237 aa13.21□□□□□ -0.3
CCDC7-202ENST00000302316 LINC01565O15544 149 aa13.21□□□□□ -0.3
CCDC7-202ENST00000302316 FSHRP23945 695 aa13.21□□□□□ -0.3
CCDC7-202ENST00000302316 MGAT1P26572 445 aa13.21□□□□□ -0.3
CCDC7-202ENST00000302316 MZF1P28698 734 aaPredicted RBP13.21□□□□□ -0.3
CCDC7-202ENST00000302316 KCTD16Q68DU8 428 aa13.21□□□□□ -0.3
CCDC7-202ENST00000302316 CASC4Q6P4E1 433 aa13.21□□□□□ -0.3
CCDC7-202ENST00000302316 LINC00523Q86TU6 105 aa13.21□□□□□ -0.3
CCDC7-202ENST00000302316 PGBD5Q8N414 524 aa13.21□□□□□ -0.3
CCDC7-202ENST00000302316 EBNA1BP2Q99848 306 aaKnown RBP13.21□□□□□ -0.3
CCDC7-202ENST00000302316 APOL2Q9BQE5 337 aa13.21□□□□□ -0.3
CCDC7-202ENST00000302316 CINPQ9BW66 212 aaPredicted RBP13.21□□□□□ -0.3
CCDC7-202ENST00000302316 FSD1LQ9BXM9 530 aa13.21□□□□□ -0.3
CCDC7-202ENST00000302316 ROPN1BQ9BZX4 212 aaPredicted RBP13.21□□□□□ -0.3
CCDC7-202ENST00000302316 POLR1EQ9GZS1 481 aaKnown RBP13.21□□□□□ -0.3
CCDC7-202ENST00000302316 ROPN1Q9HAT0 212 aaPredicted RBP13.21□□□□□ -0.3
CCDC7-202ENST00000302316 HAUS2Q9NVX0 235 aa13.21□□□□□ -0.3
CCDC7-202ENST00000302316 ACTL7AQ9Y615 435 aa13.21□□□□□ -0.3
CCDC7-202ENST00000302316 C2orf16Q68DN1 1984 aa13.2□□□□□ -0.3
CCDC7-202ENST00000302316 TNRC18O15417 2968 aaPredicted RBP13.2□□□□□ -0.3
CCDC7-202ENST00000302316 SDR42E2A6NKP2 422 aa13.2□□□□□ -0.3
CCDC7-202ENST00000302316 POLR3GO15318 223 aaPredicted RBP13.2□□□□□ -0.3
CCDC7-202ENST00000302316 PMPCBO75439 489 aa13.2□□□□□ -0.3
CCDC7-202ENST00000302316 SPAG6O75602 509 aa13.2□□□□□ -0.3
CCDC7-202ENST00000302316 TCF3P15923 654 aa13.2□□□□□ -0.3
CCDC7-202ENST00000302316 CRADDP78560 199 aa13.2□□□□□ -0.3
CCDC7-202ENST00000302316 DSC2Q02487 901 aa13.2□□□□□ -0.3
CCDC7-202ENST00000302316 MPP3Q13368 585 aa13.2□□□□□ -0.3
CCDC7-202ENST00000302316 FYB2Q5VWT5 728 aa13.2□□□□□ -0.3
CCDC7-202ENST00000302316 GET4Q7L5D6 327 aaPredicted RBP13.2□□□□□ -0.3
CCDC7-202ENST00000302316 GPR149Q86SP6 731 aa13.2□□□□□ -0.3
CCDC7-202ENST00000302316 NPAS3Q8IXF0 933 aa13.2□□□□□ -0.3
CCDC7-202ENST00000302316 EFHBQ8N7U6 833 aa13.2□□□□□ -0.3
CCDC7-202ENST00000302316 IMP4Q96G21 291 aaKnown RBP13.2□□□□□ -0.3
CCDC7-202ENST00000302316 ATP6V1G3Q96LB4 118 aa13.2□□□□□ -0.3
CCDC7-202ENST00000302316 TBL1YQ9BQ87 522 aa13.2□□□□□ -0.3
CCDC7-202ENST00000302316 FEM1AQ9BSK4 669 aa13.2□□□□□ -0.3
CCDC7-202ENST00000302316 FICDQ9BVA6 458 aa13.2□□□□□ -0.3
CCDC7-202ENST00000302316 KIF9Q9HAQ2 790 aa13.2□□□□□ -0.3
CCDC7-202ENST00000302316 CASS4Q9NQ75 786 aa13.2□□□□□ -0.3
CCDC7-202ENST00000302316 VPS18Q9P253 973 aa13.2□□□□□ -0.3
CCDC7-202ENST00000302316 TBC1D14Q9P2M4 693 aa13.2□□□□□ -0.3
CCDC7-202ENST00000302316 SEPT3Q9UH03 358 aa13.2□□□□□ -0.3
CCDC7-202ENST00000302316 SNAP91O60641 907 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 CD86P42081 329 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 ARF5P84085 180 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 NIPAL4Q0D2K0 466 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 CDH17Q12864 832 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 RFTN1Q14699 578 aaPredicted RBP13.19□□□□□ -0.3
CCDC7-202ENST00000302316 PCSK7Q16549 785 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 SKIDA1Q1XH10 827 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 TMEM184AQ6ZMB5 413 aa13.19□□□□□ -0.3
CCDC7-202ENST00000302316 CELF5Q8N6W0 485 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms