RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 CCL23P55773 120 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 RAET1GQ6H3X3 334 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 C19orf60Q96EN9 201 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 MBOAT7Q96N66 472 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 KIFC1Q9BW19 673 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 BLOC1S4Q9NUP1 217 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 OGDHLQ9ULD0 1010 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 FGRP09769 529 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 CTSEP14091 401 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 MAMLD1Q13495 774 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 BRSK2Q8IWQ3 736 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 OR6K2Q8NGY2 324 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 KCTD4Q8WVF5 259 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ASB8Q9H765 288 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 NFASCO94856 1347 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ZC3H13Q5T200 1668 aaKnown RBP13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 REREQ9P2R6 1566 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 MEGF6O75095 1541 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 PGK1P00558 417 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 RPL14P50914 215 aaKnown RBP13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 EPS8Q12929 822 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 FAM124AQ86V42 546 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ZCCHC9Q8N567 271 aaKnown RBP13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ST13P5Q8NFI4 369 aaPredicted RBP13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ELOVL4Q9GZR5 314 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 POLR1EQ9GZS1 481 aaKnown RBP13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 TRHDEQ9UKU6 1024 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 SLC12A4Q9UP95 1085 aa13.74□□□□□ -0.21
CHRFAM7A-201ENST00000299847 MARCKSL1P49006 195 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 WASHC2DQ5SRD0 308 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 USP45Q70EL2 814 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 PTGR2Q8N8N7 351 aaPredicted RBP13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 C12orf29Q8N999 325 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ETNPPLQ8TBG4 499 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 HELQQ8TDG4 1101 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 AENQ8WTP8 325 aaKnown RBP13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 MECRQ9BV79 373 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 FAM126AQ9BYI3 521 aaPredicted RBP13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 KIAA1683Q9H0B3 1180 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 MRPL17Q9NRX2 175 aaKnown RBP13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 EHD3Q9NZN3 535 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 RTN3O95197 1032 aaPredicted RBP13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ZBTB11O95625 1053 aaPredicted RBP13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 CYP4B1P13584 511 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 TPP2P29144 1249 aaPredicted RBP13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 CXCL17Q6UXB2 119 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 UNC5AQ6ZN44 842 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 RBM23Q86U06 439 aaKnown RBP13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ALYREFQ86V81 257 aaKnown RBP13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 SVOPQ8N4V2 548 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 CXorf40AQ8TE69 158 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 LRRC39Q96DD0 335 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 REXO5Q96IC2 774 aaKnown RBP13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 NCKAP1Q9Y2A7 1128 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ACKR2O00590 384 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 OPLAHO14841 1288 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 NKRFO15226 690 aaKnown RBP eCLIP13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ITGADQ13349 1161 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 KLHL24Q6TFL4 600 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 KIAA1324Q6UXG2 1013 aaKnown RBP13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 TNS4Q8IZW8 715 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 CEP44Q9C0F1 390 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 DIABLOQ9NR28 239 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 DLC1Q96QB1 1528 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 PTPRMP28827 1452 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 LYPLA1O75608 230 aaPredicted RBP13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 IL2P60568 153 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 PROSER1Q86XN7 944 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 DHRSXQ8N5I4 330 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 NAT16Q8N8M0 369 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ACTRT2Q8TDY3 377 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ATXN2LQ8WWM7 1075 aaKnown RBP13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 TBCBQ99426 244 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 KLHL31Q9H511 634 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 FRMPD4Q14CM0 1322 aa13.73□□□□□ -0.21
CHRFAM7A-201ENST00000299847 GRIA4P48058 902 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 C21orf59P57076 290 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 CREG2Q8IUH2 290 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ZDHHC13Q8IUH4 622 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ZDHHC17Q8IUH5 632 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 LNX1Q8TBB1 728 aaPredicted RBP13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 REPS1Q96D71 796 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 CIDEBQ9UHD4 219 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 ITSN1Q15811 1721 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 TRUB2O95900 331 aaKnown RBP13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 GOT1P17174 413 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 PTPRAP18433 802 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 RAB27AP51159 221 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 TGFB2P61812 414 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 KRR1Q13601 381 aaKnown RBP13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 RAPSNQ13702 412 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 LPIN1Q14693 890 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 GRIK5Q16478 980 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 COLGALT2Q8IYK4 626 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 TRAPPC9Q96Q05 1148 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 MRPS7Q9Y2R9 242 aaKnown RBP13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 SETBP1Q9Y6X0 1596 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 PSMG1O95456 288 aa13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 SRSF11Q05519 484 aaKnown RBP13.72□□□□□ -0.21
CHRFAM7A-201ENST00000299847 VGLL4Q14135 290 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms