RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 CSDE1O75534 798 aaKnown RBP16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 IRF1P10914 325 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 GPC1P35052 558 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 NDUFA5Q16718 116 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 AMIGO2Q86SJ2 522 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 PHF13Q86YI8 300 aaPredicted RBP16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 LZTR1Q8N653 840 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 MARK4Q96L34 752 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 TEKT5Q96M29 485 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 ASB7Q9H672 318 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 SCUBE2Q9NQ36 999 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 CRNNQ9UBG3 495 aaPredicted RBP16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 CLCA2Q9UQC9 943 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 TISP43B9A030 160 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 CCNT2O60583 730 aaKnown RBP16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 HALP42357 657 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 DPYSQ14117 519 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 FBXO47Q5MNV8 452 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 WDR36Q8NI36 951 aaKnown RBP16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 FAM45AQ8TCE6 357 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 NAT14Q8WUY8 206 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 CENPIQ92674 756 aaPredicted RBP16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 P2RX7Q99572 595 aaKnown RBP16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 REEP1Q9H902 201 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 MAN1C1Q9NR34 630 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 INVSQ9Y283 1065 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 USP12O75317 370 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 SPIRE1Q08AE8 756 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 PSTKQ8IV42 348 aaKnown RBP16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 SCUBE3Q8IX30 993 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 KRT78Q8N1N4 520 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 RBM15BQ8NDT2 890 aaKnown RBP16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 NKX2-3Q8TAU0 364 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 RDH11Q8TC12 318 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 ZFP42Q96MM3 310 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 ADGRE3Q9BY15 652 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 TRIM8Q9BZR9 551 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 LOC100506127A0A0U1RQW1 187 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 SEC22BO75396 215 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 TRMUO75648 421 aaKnown RBP16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 ZIK1Q3SY52 487 aaPredicted RBP16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 KLHL12Q53G59 568 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 UNC5AQ6ZN44 842 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 KLHL23Q8NBE8 558 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 TMEM169Q96HH4 297 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 ACE2Q9BYF1 805 aaPredicted RBP16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 UBXN6Q9BZV1 441 aa16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 WDR12Q9GZL7 423 aaKnown RBP16.69■□□□□ 0.26
SNAPC4-201ENST00000298532 NFAT5O94916 1531 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 MYL12BO14950 172 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 TGDSO95455 350 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 SERPINF2P08697 491 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 LHX1P48742 406 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 MIB1Q86YT6 1006 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 KBTBD8Q8NFY9 601 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 FBXO30Q8TB52 745 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 LRRC4CQ9HCJ2 640 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 DHRS12A0PJE2 317 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 E5RJQ4 531 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 H7C4K7 107 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 BMT2Q1RMZ1 405 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 NEPROQ6NW34 567 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 VGLL2Q8N8G2 317 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 PSMA8Q8TAA3 256 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 SLIT2O94813 1529 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 CAPN8A6NHC0 703 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 BPGMP07738 259 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 ITGA2BP08514 1039 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 LTA4HP09960 611 aaKnown RBP16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 ALDH7A1P49419 539 aaKnown RBP16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 ZNF135P52742 658 aaPredicted RBP16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 NPNTQ6UXI9 565 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 RIOX2Q8IUF8 465 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 SMAD5Q99717 465 aaKnown RBP16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 LEF1Q9UJU2 399 aaPredicted RBP16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 PIAS1O75925 651 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 VCLP18206 1134 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 ABCG1P45844 678 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 PGM5Q15124 567 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 MILR1Q7Z6M3 343 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 ZHX1-C8orf76Q96EF9 292 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 RNF157Q96PX1 679 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 RAB26Q9ULW5 256 aa16.68■□□□□ 0.26
SNAPC4-201ENST00000298532 H3BNX3 289 aa16.67■□□□□ 0.26
SNAPC4-201ENST00000298532 MYL12AP19105 171 aa16.67■□□□□ 0.26
SNAPC4-201ENST00000298532 CDH8P55286 799 aa16.67■□□□□ 0.26
SNAPC4-201ENST00000298532 ADIGQ0VDE8 80 aa16.67■□□□□ 0.26
SNAPC4-201ENST00000298532 PIGWQ7Z7B1 504 aa16.67■□□□□ 0.26
SNAPC4-201ENST00000298532 DDX53Q86TM3 631 aaKnown RBP16.67■□□□□ 0.26
SNAPC4-201ENST00000298532 DEFB106AQ8N104 65 aa16.67■□□□□ 0.26
SNAPC4-201ENST00000298532 FAM47BQ8NA70 645 aa16.67■□□□□ 0.26
SNAPC4-201ENST00000298532 TPD52L3Q96J77 140 aa16.67■□□□□ 0.26
SNAPC4-201ENST00000298532 MECRQ9BV79 373 aa16.67■□□□□ 0.26
SNAPC4-201ENST00000298532 ENTPD7Q9NQZ7 604 aa16.67■□□□□ 0.26
SNAPC4-201ENST00000298532 SQORQ9Y6N5 450 aa16.67■□□□□ 0.26
SNAPC4-201ENST00000298532 ROBO1Q9Y6N7 1651 aa16.67■□□□□ 0.26
SNAPC4-201ENST00000298532 TK2O00142 265 aa16.67■□□□□ 0.26
SNAPC4-201ENST00000298532 B3GAT3O94766 335 aa16.67■□□□□ 0.26
SNAPC4-201ENST00000298532 S100A3P33764 101 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms