RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.06□□□□□ -1.44
SSX3-201ENST00000298396 PCDH19Q8TAB3 1148 aa6.06□□□□□ -1.44
SSX3-201ENST00000298396 KIAA1524Q8TCG1 905 aa6.06□□□□□ -1.44
SSX3-201ENST00000298396 CSGALNACT1Q8TDX6 532 aa6.06□□□□□ -1.44
SSX3-201ENST00000298396 DDI1Q8WTU0 396 aa6.06□□□□□ -1.44
SSX3-201ENST00000298396 HSPH1Q92598 858 aa6.06□□□□□ -1.44
SSX3-201ENST00000298396 TTC9Q92623 222 aa6.06□□□□□ -1.44
SSX3-201ENST00000298396 EDAQ92838 391 aa6.06□□□□□ -1.44
SSX3-201ENST00000298396 TBC1D31Q96DN5 1066 aa6.06□□□□□ -1.44
SSX3-201ENST00000298396 TMA16Q96EY4 203 aaKnown RBP6.06□□□□□ -1.44
SSX3-201ENST00000298396 HES6Q96HZ4 224 aa6.06□□□□□ -1.44
SSX3-201ENST00000298396 RPRD1AQ96P16 312 aaPredicted RBP6.06□□□□□ -1.44
SSX3-201ENST00000298396 CSPG4P5Q96PW8 444 aa6.06□□□□□ -1.44
SSX3-201ENST00000298396 PSMB7Q99436 277 aa6.06□□□□□ -1.44
SSX3-201ENST00000298396 TLR10Q9BXR5 811 aa6.06□□□□□ -1.44
SSX3-201ENST00000298396 EPHX3Q9H6B9 360 aa6.06□□□□□ -1.44
SSX3-201ENST00000298396 LUC7LQ9NQ29 371 aaKnown RBP6.06□□□□□ -1.44
SSX3-201ENST00000298396 ARHGEF4Q9NR80 690 aa6.06□□□□□ -1.44
SSX3-201ENST00000298396 KCND1Q9NSA2 647 aa6.06□□□□□ -1.44
SSX3-201ENST00000298396 POLR3BQ9NW08 1133 aaPredicted RBP6.06□□□□□ -1.44
SSX3-201ENST00000298396 C2orf42Q9NWW7 574 aa6.06□□□□□ -1.44
SSX3-201ENST00000298396 DNAJB12Q9NXW2 375 aaKnown RBP6.06□□□□□ -1.44
SSX3-201ENST00000298396 FRRS1LQ9P0K9 344 aa6.06□□□□□ -1.44
SSX3-201ENST00000298396 WNT16Q9UBV4 365 aa6.06□□□□□ -1.44
SSX3-201ENST00000298396 SLC12A6Q9UHW9 1150 aa6.06□□□□□ -1.44
SSX3-201ENST00000298396 FOXD3Q9UJU5 478 aaPredicted RBP6.06□□□□□ -1.44
SSX3-201ENST00000298396 SLC6A14Q9UN76 642 aa6.06□□□□□ -1.44
SSX3-201ENST00000298396 TBC1D30Q9Y2I9 924 aa6.06□□□□□ -1.44
SSX3-201ENST00000298396 STARD13Q9Y3M8 1113 aa6.06□□□□□ -1.44
SSX3-201ENST00000298396 MYO15AQ9UKN7 3530 aa6.06□□□□□ -1.44
SSX3-201ENST00000298396 TRPM6Q9BX84 2022 aa6.06□□□□□ -1.44
SSX3-201ENST00000298396 KNL1Q8NG31 2342 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 PLXNA2O75051 1894 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 RALGAPA1Q6GYQ0 2036 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 A0A0A0MRY4 1105 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 A0A0D9SEW6 157 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 A0A1B0GVM2 712 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 TCAF2A6NFQ2 919 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 SHISA8B8ZZ34 492 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 EEF2KO00418 725 aaKnown RBP6.05□□□□□ -1.44
SSX3-201ENST00000298396 PSTPIP1O43586 416 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 PI15O43692 258 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 KRT86O43790 486 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 SPOPO43791 374 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 CREB3O43889 395 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 ZMPSTE24O75844 475 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 KAT7O95251 611 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 CD160O95971 181 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 CHRNB1P11230 501 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 TNNT1P13805 278 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 HNRNPLP14866 589 aaKnown RBP eCLIP6.05□□□□□ -1.442e-7■■□□□ 12.9
SSX3-201ENST00000298396 ERCC2P18074 760 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 AMPD1P23109 780 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 GLDCP23378 1020 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 ACVRL1P37023 503 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 CSKP41240 450 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 CDKN2BP42772 138 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 SLC1A1P43005 524 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 SSR1P43307 286 aaKnown RBP6.05□□□□□ -1.44
SSX3-201ENST00000298396 KIR2DL1P43626 348 aaPredicted RBP6.05□□□□□ -1.44
SSX3-201ENST00000298396 HCAR3P49019 387 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 CDH4P55283 916 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 CDH6P55285 790 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 TPI1P60174 286 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 PFKPQ01813 784 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 SLC10A2Q12908 348 aaPredicted RBP6.05□□□□□ -1.44
SSX3-201ENST00000298396 LLGL1Q15334 1064 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 ARL13BQ3SXY8 428 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 ANKRD20A8PQ5CZ79 823 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 PPP6R3Q5H9R7 873 aaPredicted RBP6.05□□□□□ -1.44
SSX3-201ENST00000298396 RABGAP1LQ5R372 815 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 FAM182AQ5T1J6 154 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 MPP7Q5T2T1 576 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 MEI1Q5TIA1 1274 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 EMC10Q5UCC4 262 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 TTC39BQ5VTQ0 682 aaPredicted RBP6.05□□□□□ -1.44
SSX3-201ENST00000298396 NCBP2-AS2Q69YL0 99 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 ARHGAP36Q6ZRI8 547 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 RFX8Q6ZV50 586 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 CHST9Q7L1S5 443 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 MFN1Q8IWA4 741 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 GALNT12Q8IXK2 581 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 CCDC105Q8IYK2 499 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 KATNAL2Q8IYT4 538 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 CARNMT1Q8N4J0 409 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 PLD5Q8N7P1 536 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 RTL3Q8N8U3 475 aaKnown RBP6.05□□□□□ -1.44
SSX3-201ENST00000298396 TERB1Q8NA31 727 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 OR7D4Q8NG98 312 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 FIBINQ8TAL6 211 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 EDARADDQ8WWZ3 215 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 SORCS1Q8WY21 1168 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 VOPP1Q96AW1 172 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 WDR24Q96S15 920 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 P2RY13Q9BPV8 354 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 NCAPGQ9BPX3 1015 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 DDX50Q9BQ39 737 aaKnown RBP6.05□□□□□ -1.44
SSX3-201ENST00000298396 TSGA10Q9BZW7 698 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 ZYG11BQ9C0D3 744 aa6.05□□□□□ -1.44
SSX3-201ENST00000298396 C8orf33Q9H7E9 229 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms