RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 RPL10LQ96L21 214 aaKnown RBP15.1■□□□□ 0.01
SPIDR-201ENST00000297423 IARS2Q9NSE4 1012 aaKnown RBP15.1■□□□□ 0.01
SPIDR-201ENST00000297423 WDR70Q9NW82 654 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 EFR3BQ9Y2G0 817 aa15.1■□□□□ 0.01
SPIDR-201ENST00000297423 ZNF23P17027 643 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 BCAP31P51572 246 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 ARL13AQ5H913 290 aaPredicted RBP15.09■□□□□ 0.01
SPIDR-201ENST00000297423 RPS27LQ71UM5 84 aaKnown RBP15.09■□□□□ 0.01
SPIDR-201ENST00000297423 SCUBE3Q8IX30 993 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 TAMM41Q96BW9 452 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 NFASCO94856 1347 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 DGAT1O75907 488 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 ALDOAP04075 364 aaKnown RBP15.09■□□□□ 0.01
SPIDR-201ENST00000297423 SUPT20HL2P0C7V6 817 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 GARTP22102 1010 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 PAX3P23760 479 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 ALDH4A1P30038 563 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 ATXN1P54253 815 aaKnown RBP15.09■□□□□ 0.01
SPIDR-201ENST00000297423 STILQ15468 1287 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 AARS2Q5JTZ9 985 aaKnown RBP15.09■□□□□ 0.01
SPIDR-201ENST00000297423 DPP9Q86TI2 863 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 NMRAL1Q9HBL8 299 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 HEATR9A2RTY3 570 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 E7ESA3 106 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 PTGES3LE9PB15 166 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 PDHXO00330 501 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 ZNF24P17028 368 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 EMC2Q15006 297 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 NOMO1Q15155 1222 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 FAM47CQ5HY64 1035 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 CDKL3Q8IVW4 592 aaPredicted RBP15.09■□□□□ 0.01
SPIDR-201ENST00000297423 SIX5Q8N196 739 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 LRRC71Q8N4P6 559 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 PLD5Q8N7P1 536 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 RNF157Q96PX1 679 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 AGAP2Q99490 1192 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 OSBPL11Q9BXB4 747 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 PKD2L2Q9NZM6 624 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 FETUBQ9UGM5 382 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 CNTRLQ7Z7A1 2325 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 PAPSS1O43252 624 aaPredicted RBP15.09■□□□□ 0.01
SPIDR-201ENST00000297423 SNNO75324 88 aaPredicted RBP15.09■□□□□ 0.01
SPIDR-201ENST00000297423 ATE1O95260 518 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 SPRP35270 261 aaPredicted RBP15.09■□□□□ 0.01
SPIDR-201ENST00000297423 NKX2-5P52952 324 aaPredicted RBP15.09■□□□□ 0.01
SPIDR-201ENST00000297423 STX1BP61266 288 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 KCNJ11Q14654 390 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 CA9Q16790 459 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 PGM2L1Q6PCE3 622 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 USP33Q8TEY7 942 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 PHF21BQ96EK2 531 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 FBXL20Q96IG2 436 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 ZNF696Q9H7X3 374 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 GMPR2Q9P2T1 348 aaKnown RBP15.09■□□□□ 0.01
SPIDR-201ENST00000297423 RBPJLQ9UBG7 517 aa15.09■□□□□ 0.01
SPIDR-201ENST00000297423 INPP4BO15327 924 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 OXSR1O95747 527 aaPredicted RBP15.08■□□□□ 0
SPIDR-201ENST00000297423 IL10P22301 178 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 CYP2F1P24903 491 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 DNASE1L3Q13609 305 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 IKBKEQ14164 716 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 PDCD4Q53EL6 469 aaKnown RBP15.08■□□□□ 0
SPIDR-201ENST00000297423 SLFN12LQ6IEE8 588 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 CCDC60Q8IWA6 550 aaPredicted RBP15.08■□□□□ 0
SPIDR-201ENST00000297423 HERC2P3Q9BVR0 1158 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 MARCH7Q9H992 704 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 GPC6Q9Y625 555 aaPredicted RBP15.08■□□□□ 0
SPIDR-201ENST00000297423 FBXO21O94952 628 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 POLBP06746 335 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 LCP1P13796 627 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 TGM2P21980 687 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 ARL4AP40617 200 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 RPL14P50914 215 aaKnown RBP15.08■□□□□ 0
SPIDR-201ENST00000297423 NAPRTQ6XQN6 538 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 ZC3H7AQ8IWR0 971 aaKnown RBP15.08■□□□□ 0
SPIDR-201ENST00000297423 SYBUQ9NX95 663 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 E7ENX8 843 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 KRT75O95678 551 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 FUCA1P04066 466 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 TFEBP19484 476 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 STAT5BP51692 787 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 SLC7A2P52569 658 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 SLC10A2Q12908 348 aaPredicted RBP15.08■□□□□ 0
SPIDR-201ENST00000297423 ZNF460Q14592 562 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 OR52K1Q8NGK4 314 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 CANT1Q8WVQ1 401 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 SEPT1Q8WYJ6 367 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 FRMD8Q9BZ67 464 aaPredicted RBP15.08■□□□□ 0
SPIDR-201ENST00000297423 TXNRD2Q9NNW7 524 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 POLE4Q9NR33 117 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 CHST12Q9NRB3 414 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 DDX28Q9NUL7 540 aaKnown RBP15.08■□□□□ 0
SPIDR-201ENST00000297423 RNF11Q9Y3C5 154 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 PCDHA11Q9Y5I1 949 aa15.08■□□□□ 0
SPIDR-201ENST00000297423 ASB14A6NK59 587 aa15.07■□□□□ 0
SPIDR-201ENST00000297423 H0YCG3 227 aa15.07■□□□□ 0
SPIDR-201ENST00000297423 HDAC3O15379 428 aa15.07■□□□□ 0
SPIDR-201ENST00000297423 JAK1P23458 1154 aa15.07■□□□□ 0
SPIDR-201ENST00000297423 SLC25A11Q02978 314 aaKnown RBP15.07■□□□□ 0
SPIDR-201ENST00000297423 AMHR2Q16671 573 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms