RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 CASQ2O14958 399 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 MATN3O15232 486 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 JCHAINP01591 159 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 NCF2P19878 526 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 TYMPP19971 482 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 MTTPP55157 894 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 RFTN1Q14699 578 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 UPP1Q16831 310 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 MANEALQ5VSG8 457 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 KIAA0930Q6ICG6 404 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 ZFP1Q6P2D0 407 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 CES3Q6UWW8 571 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 GPRIN1Q7Z2K8 1008 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 PIWIL4Q7Z3Z4 852 aaKnown RBP10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 SDCCAG8Q86SQ7 713 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 THEM5Q8N1Q8 247 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 ARHGAP18Q8N392 663 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 RNF34Q969K3 372 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 MFSD3Q96ES6 412 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 ZFP42Q96MM3 310 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 AGAP2Q99490 1192 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 GATA5Q9BWX5 397 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 SENP6Q9GZR1 1112 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 TASP1Q9H6P5 420 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 MRPL40Q9NQ50 206 aaKnown RBP10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 CHRAC1Q9NRG0 131 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 PIH1D1Q9NWS0 290 aaKnown RBP10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 ST3GAL5Q9UNP4 418 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 ACOT9Q9Y305 439 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 WASF2Q9Y6W5 498 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 SCN10AQ9Y5Y9 1956 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 ARL5CA6NH57 179 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 WASH4PA8MWX3 477 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 I6L893 689 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 IRAK2O43187 625 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 ATP9BO43861 1147 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 DUSP11O75319 330 aaKnown RBP10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 TADA2AO75478 443 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 PDHA1P08559 390 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 PIM1P11309 404 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 AKR1A1P14550 325 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 ITGAXP20702 1163 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 SP100P23497 879 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 ARRB2P32121 409 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 CCR1P32246 355 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 PPARGP37231 505 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 CLCNKBP51801 687 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 INHBEP58166 350 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 RAB10P61026 200 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 TSPY1Q01534 308 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 POU4F1Q01851 419 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 GRIK3Q13003 919 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 USP10Q14694 798 aaKnown RBP10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 AFMIDQ63HM1 303 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 IZUMO2Q6UXV1 221 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 RAPH1Q70E73 1250 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 PLD6Q8N2A8 252 aaKnown RBP10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 ZNF781Q8N8C0 355 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 CATSPER1Q8NEC5 780 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 TSPAN17Q96FV3 270 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 BTBD9Q96Q07 612 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 RANBP9Q96S59 729 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 GAD1Q99259 594 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 PKMYT1Q99640 499 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 MRPL57Q9BQC6 102 aaKnown RBP10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 TRPC7Q9HCX4 862 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 ANLNQ9NQW6 1124 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 C6orf203Q9P0P8 240 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 STK39Q9UEW8 545 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 SLC39A10Q9ULF5 831 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 CDYLQ9Y232 598 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 TCAF1Q9Y4C2 921 aa10.16□□□□□ -0.78
TNFRSF11B-201ENST00000297350 USP12O75317 370 aa10.15□□□□□ -0.78
TNFRSF11B-201ENST00000297350 LINGO3P0C6S8 592 aa10.15□□□□□ -0.78
TNFRSF11B-201ENST00000297350 SLC2A3P11169 496 aa10.15□□□□□ -0.78
TNFRSF11B-201ENST00000297350 STMN1P16949 149 aa10.15□□□□□ -0.78
TNFRSF11B-201ENST00000297350 HOXB8P17481 243 aaPredicted RBP10.15□□□□□ -0.78
TNFRSF11B-201ENST00000297350 PAX7P23759 505 aa10.15□□□□□ -0.78
TNFRSF11B-201ENST00000297350 CALRP27797 417 aaKnown RBP10.15□□□□□ -0.78
TNFRSF11B-201ENST00000297350 SH3BGRP55822 239 aaPredicted RBP10.15□□□□□ -0.78
TNFRSF11B-201ENST00000297350 SLC25A3Q00325 362 aa10.15□□□□□ -0.78
TNFRSF11B-201ENST00000297350 TBL3Q12788 808 aaKnown RBP10.15□□□□□ -0.78
TNFRSF11B-201ENST00000297350 GRM3Q14832 879 aa10.15□□□□□ -0.78
TNFRSF11B-201ENST00000297350 C17orf99Q6UX52 265 aa10.15□□□□□ -0.78
TNFRSF11B-201ENST00000297350 CNTD1Q8N815 330 aa10.15□□□□□ -0.78
TNFRSF11B-201ENST00000297350 ADAM32Q8TC27 787 aa10.15□□□□□ -0.78
TNFRSF11B-201ENST00000297350 MRPL46Q9H2W6 279 aaKnown RBP10.15□□□□□ -0.78
TNFRSF11B-201ENST00000297350 NMRK2Q9NPI5 230 aa10.15□□□□□ -0.78
TNFRSF11B-201ENST00000297350 NEU3Q9UQ49 428 aa10.15□□□□□ -0.78
TNFRSF11B-201ENST00000297350 ASB3Q9Y575 518 aa10.15□□□□□ -0.78
TNFRSF11B-201ENST00000297350 SHROOM3Q8TF72 1996 aa10.15□□□□□ -0.78
TNFRSF11B-201ENST00000297350 CASP8AP2Q9UKL3 1982 aa10.15□□□□□ -0.78
TNFRSF11B-201ENST00000297350 DPPA5A6NC42 116 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 MEI4A8MW99 385 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 TARM1B6A8C7 271 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 INPPL1O15357 1258 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 DCXO43602 365 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 BUD23O43709 281 aaKnown RBP10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 AHCYL1O43865 530 aa10.15□□□□□ -0.79
TNFRSF11B-201ENST00000297350 PAPSS2O95340 614 aaPredicted RBP10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms