RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 POU5F1Q01860 360 aaKnown RBP17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 FAM84AQ96KN4 292 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 CCDC134Q9H6E4 229 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 GPSM3Q9Y4H4 160 aa17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 CICQ96RK0 1608 aaPredicted RBP17.94■□□□□ 0.46
CDC42EP3-201ENST00000295324 ABHD14A-ACY1A0A1B0GW23 586 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 PCYT1AP49585 367 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 IRF2BP2Q7Z5L9 587 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 STAG3L4Q8TBR4 150 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 DIS3LQ8TF46 1054 aaKnown RBP17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 APOPT1Q96IL0 206 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 EXOC2Q96KP1 924 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 HNRNPABQ99729 332 aaKnown RBP17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 CYLDQ9NQC7 956 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 TMCC3Q9ULS5 477 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 AKAP12Q02952 1782 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 hCG_1818297A0A087WSY0 165 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 TFE3P19532 575 aaPredicted RBP17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 DYNC1I2Q13409 638 aaKnown RBP17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 INSL6Q9Y581 213 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 PCDHB9Q9Y5E1 797 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 NID2Q14112 1375 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 ARHGEF9O43307 516 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 ITGAVP06756 1048 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 PSMA4P25789 261 aaKnown RBP17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 HNRNPH3P31942 346 aaKnown RBP17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 MMRN1Q13201 1228 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 LRRC8BQ6P9F7 803 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 KREMEN2Q8NCW0 462 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 NTPCRQ9BSD7 190 aaKnown RBP17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 HPS4Q9NQG7 708 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 RCOR3Q9P2K3 495 aaPredicted RBP17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 ZNHIT2Q9UHR6 403 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 TMEM191CA6NGB0 347 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 PDHA1P08559 390 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 NME5P56597 212 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 PARP15Q460N3 678 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 FAM45BPQ6NSW5 357 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 FAM45AQ8TCE6 357 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 B3GNT5Q9BYG0 378 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 SLC24A3Q9HC58 644 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 ANKDD1BA6NHY2 528 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 NDUFB5O43674 189 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 SEC24DO94855 1032 aaPredicted RBP17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 HTR7P34969 479 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 CLCN5P51795 746 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 ENPEPQ07075 957 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 MSLNQ13421 630 aaPredicted RBP17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 ZNF618Q5T7W0 954 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 CYP4Z1Q86W10 505 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 ECHDC2Q86YB7 292 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 V9GYQ6 96 aa17.93■□□□□ 0.46
CDC42EP3-201ENST00000295324 NR5A2O00482 541 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 BUD23O43709 281 aaKnown RBP17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 C1RP00736 705 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 ELFN1P0C7U0 828 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 ZSCAN5DPP0CG00 497 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 YBEYP58557 167 aaPredicted RBP17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 CHRNB3Q05901 458 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 ATAD3BQ5T9A4 648 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 P3H2Q8IVL5 708 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 ANKRD7Q92527 254 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 L1RE1Q9UN81 338 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 TBC1D3DA0A087WVF3 549 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 TBC1D3IA0A087WXS9 549 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 TBC1D3EA0A087X179 549 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 TBC1D3KA0A087X1G2 549 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 TBC1D3FA6NER0 549 aaPredicted RBP17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 TBC1D3LB9A6J9 549 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 MSI1O43347 362 aaKnown RBP17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 C8AP07357 584 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 TBC1D3HP0C7X1 549 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 RPL22P35268 128 aaKnown RBP17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 TBC1D3GQ6DHY5 549 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 TBC1D3CQ6IPX1 549 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 TMC3Q7Z5M5 1100 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 TBC1D3Q8IZP1 549 aaPredicted RBP17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 CENPLQ8N0S6 344 aaPredicted RBP17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 USP6NLQ92738 828 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 FAXDC2Q96IV6 333 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 SOHLH2Q9NX45 425 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 PLK2Q9NYY3 685 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 MORF4L1Q9UBU8 362 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 A0A1W2PQ67 120 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 C21orf59P57076 290 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 IRF8Q02556 426 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 CNKSR3Q6P9H4 555 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 ALLCQ8N6M5 410 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 PHF21AQ96BD5 680 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 IKZF4Q9H2S9 585 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 PEAK1Q9H792 1746 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 SEC22BO75396 215 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 COL9A3Q14050 684 aaPredicted RBP17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 TRIP10Q15642 601 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 JOSD2Q8TAC2 188 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 STARD8Q92502 1023 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 FAM120BQ96EK7 910 aaKnown RBP17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 MCRS1Q96EZ8 462 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 LGMNQ99538 433 aa17.92■□□□□ 0.46
CDC42EP3-201ENST00000295324 PCDH18Q9HCL0 1135 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms