RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 ZMPSTE24O75844 475 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 MT-CO1P00395 513 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 CCDC166P0CW27 439 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 EDNRBP24530 442 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 ATP5C1P36542 298 aaKnown RBP11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 PTK6Q13882 451 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 PDK1Q15118 436 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 CNPY1Q3B7I2 92 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 TIGD5Q53EQ6 642 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 SPOCD1Q6ZMY3 1216 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 SLC47A2Q86VL8 602 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 DHFR2Q86XF0 187 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 SYTL1Q8IYJ3 562 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 DNAJC19Q96DA6 116 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 SEPHS2Q99611 448 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 ADGRA2Q96PE1 1338 aa11.54□□□□□ -0.56
NPC1L1-201ENST00000289547 PDZK1P1A8MUH7 402 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 MATN2O00339 956 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 IDH3BO43837 385 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 CNOT3O75175 753 aaKnown RBP11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 FCGR1AP12314 374 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 MIIPQ5JXC2 388 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 EGFLAMQ63HQ2 1017 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 AAGABQ6PD74 315 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 SKA1Q96BD8 255 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 CHID1Q9BWS9 393 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 ABCC13Q9NSE7 274 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 ARHGAP28Q9P2N2 729 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 RHOCP08134 193 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 C9orf57Q5W0N0 161 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 ZCCHC9Q8N567 271 aaKnown RBP11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 C4orf32Q8N8J7 132 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 BAP1Q92560 729 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 RORBQ92753 470 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 DNAJC1Q96KC8 554 aaKnown RBP11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 PWWP2AQ96N64 755 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 CINPQ9BW66 212 aaPredicted RBP11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 ST6GALNAC4Q9H4F1 302 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 CASS4Q9NQ75 786 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 PCYOX1Q9UHG3 505 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 PHF24Q9UPV7 400 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 CAPN8A6NHC0 703 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 INPP4BO15327 924 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 ASS1P00966 412 aaKnown RBP11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 CHKAP35790 457 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 IL5RAQ01344 420 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 BMT2Q1RMZ1 405 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 C12orf56Q8IXR9 622 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 THUMPD3Q9BV44 507 aaKnown RBP11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 CIPCQ9C0C6 399 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 RAB23Q9ULC3 237 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 UBR3Q6ZT12 1888 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 RAD51BO15315 384 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 NCAM2O15394 837 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 SUPT7LO94864 414 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 VCLP18206 1134 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 CASP5P51878 434 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 POU5F1Q01860 360 aaKnown RBP11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 ATG14Q6ZNE5 492 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 PHF21AQ96BD5 680 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 ZNF570Q96NI8 536 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 RAD9AQ99638 391 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 NEUROG2Q9H2A3 272 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 CHKBQ9Y259 395 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 WNK3Q9BYP7 1800 aa11.53□□□□□ -0.56
NPC1L1-201ENST00000289547 A0A0B4J269 797 aa11.52□□□□□ -0.56
NPC1L1-201ENST00000289547 TRIM43BA6NCK2 446 aa11.52□□□□□ -0.56
NPC1L1-201ENST00000289547 ARL5CA6NH57 179 aa11.52□□□□□ -0.56
NPC1L1-201ENST00000289547 PITPNM1O00562 1244 aa11.52□□□□□ -0.56
NPC1L1-201ENST00000289547 B4GALT4O60513 344 aa11.52□□□□□ -0.56
NPC1L1-201ENST00000289547 ATP5BP06576 529 aaKnown RBP11.52□□□□□ -0.56
NPC1L1-201ENST00000289547 ITGA2BP08514 1039 aa11.52□□□□□ -0.56
NPC1L1-201ENST00000289547 HNRNPH3P31942 346 aaKnown RBP11.52□□□□□ -0.56
NPC1L1-201ENST00000289547 SPIDRQ14159 915 aa11.52□□□□□ -0.56
NPC1L1-201ENST00000289547 DSG4Q86SJ6 1040 aa11.52□□□□□ -0.56
NPC1L1-201ENST00000289547 DLG3Q92796 817 aa11.52□□□□□ -0.56
NPC1L1-201ENST00000289547 COX4I2Q96KJ9 171 aa11.52□□□□□ -0.56
NPC1L1-201ENST00000289547 ROGDIQ9GZN7 287 aa11.52□□□□□ -0.56
NPC1L1-201ENST00000289547 TDRKHQ9Y2W6 561 aaKnown RBP11.52□□□□□ -0.56
NPC1L1-201ENST00000289547 E5RI56 91 aa11.52□□□□□ -0.56
NPC1L1-201ENST00000289547 SLCO1B7G3V0H7 640 aa11.52□□□□□ -0.56
NPC1L1-201ENST00000289547 NR5A2O00482 541 aa11.52□□□□□ -0.56
NPC1L1-201ENST00000289547 ARPC4P59998 168 aa11.52□□□□□ -0.56
NPC1L1-201ENST00000289547 SP2Q02086 613 aa11.52□□□□□ -0.56
NPC1L1-201ENST00000289547 MLLT1Q03111 559 aaPredicted RBP11.52□□□□□ -0.56
NPC1L1-201ENST00000289547 BST1Q10588 318 aa11.52□□□□□ -0.56
NPC1L1-201ENST00000289547 TRIM69Q86WT6 500 aa11.52□□□□□ -0.56
NPC1L1-201ENST00000289547 C2orf15Q8WU43 125 aaKnown RBP11.52□□□□□ -0.56
NPC1L1-201ENST00000289547 BADQ92934 168 aa11.52□□□□□ -0.56
NPC1L1-201ENST00000289547 DCUN1D1Q96GG9 259 aa11.52□□□□□ -0.56
NPC1L1-201ENST00000289547 ZNF556Q9HAH1 456 aa11.52□□□□□ -0.56
NPC1L1-201ENST00000289547 ARHGEF3Q9NR81 526 aa11.52□□□□□ -0.56
NPC1L1-201ENST00000289547 ABCB10Q9NRK6 738 aa11.52□□□□□ -0.56
NPC1L1-201ENST00000289547 ZNF510Q9Y2H8 683 aa11.52□□□□□ -0.56
NPC1L1-201ENST00000289547 GOLGA8TH3BQL2 631 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 PIAS1O75925 651 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 ZSCAN5DPP0CG00 497 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 FGFR1P11362 822 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 TNFSF9P41273 254 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms