RNA–Protein interactions for RNA: ENST00000288197.9

CACNA2D3-201, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA2D3, Length 3,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D3-201ENST00000288197 NT5DC4Q86YG4 428 aa16.32■□□□□ 0.2
CACNA2D3-201ENST00000288197 FSTL5Q8N475 847 aaPredicted RBP16.32■□□□□ 0.2
CACNA2D3-201ENST00000288197 TTC39CQ8N584 583 aa16.32■□□□□ 0.2
CACNA2D3-201ENST00000288197 TRPM4Q8TD43 1214 aa16.32■□□□□ 0.2
CACNA2D3-201ENST00000288197 HSPBAP1Q96EW2 488 aa16.32■□□□□ 0.2
CACNA2D3-201ENST00000288197 FCRL3Q96P31 734 aaPredicted RBP16.32■□□□□ 0.2
CACNA2D3-201ENST00000288197 QKIQ96PU8 341 aaKnown RBP eCLIP16.32■□□□□ 0.2
CACNA2D3-201ENST00000288197 ALG9Q9H6U8 611 aa16.32■□□□□ 0.2
CACNA2D3-201ENST00000288197 RBM22Q9NW64 420 aaKnown RBP eCLIP16.32■□□□□ 0.2
CACNA2D3-201ENST00000288197 STK39Q9UEW8 545 aa16.32■□□□□ 0.2
CACNA2D3-201ENST00000288197 MYRFQ9Y2G1 1151 aa16.32■□□□□ 0.2
CACNA2D3-201ENST00000288197 PCDHB12Q9Y5F1 795 aa16.32■□□□□ 0.2
CACNA2D3-201ENST00000288197 MAGEB3O15480 346 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 TPSB2P20231 275 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 IL4RP24394 825 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 PLCL1Q15111 1095 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 TPSAB1Q15661 275 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 ARHGAP17Q68EM7 881 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 CLEC4FQ8N1N0 589 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 OR52K2Q8NGK3 314 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 DNAJB14Q8TBM8 379 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 APBB2Q92870 758 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 NACA2Q9H009 215 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 C6orf203Q9P0P8 240 aaPredicted RBP16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 CCDC166P0CW27 439 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 ACADSBP45954 432 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 ACBD5Q5T8D3 534 aaPredicted RBP16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 DHFR2Q86XF0 187 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 HERC6Q8IVU3 1022 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 GABPB2Q8TAK5 448 aaPredicted RBP16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 BLOC1S5Q8TDH9 187 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 RBBP8Q99708 897 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 R3HDMLQ9H3Y0 253 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 RRN3Q9NYV6 651 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 CNTN6Q9UQ52 1028 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 GAS2O43903 313 aaKnown RBP16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 LGALS2P05162 132 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 TGFB3P10600 412 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 CD1EP15812 388 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 UGP2Q16851 508 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 SLC44A4Q53GD3 710 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 FBXL19Q6PCT2 694 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 ACVR1CQ8NER5 493 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 DDI1Q8WTU0 396 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 ZNF560Q96MR9 790 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 TSPYL2Q9H2G4 693 aaPredicted RBP16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 OR12D3Q9UGF7 316 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 BTRCQ9Y297 605 aa16.31■□□□□ 0.2
CACNA2D3-201ENST00000288197 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 TRMUO75648 421 aaKnown RBP16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 MPOP05164 745 aa16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 MYL4P12829 197 aa16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 CCR3P51677 355 aa16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 CDH17Q12864 832 aa16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 GPR107Q5VW38 600 aa16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 LIPMQ5VYY2 423 aa16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 HFE2Q6ZVN8 426 aa16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 APOBEC3FQ8IUX4 373 aaKnown RBP16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 OR6J1Q8NGC5 347 aa16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 GMLQ99445 158 aa16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 GIMAP2Q9UG22 337 aa16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 CROTQ9UKG9 612 aa16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 CASTOR2A6NHX0 329 aa16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 TRPC5OSA6NMA1 111 aa16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 ADM5C9JUS6 153 aa16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 E2F6O75461 281 aa16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 PCNAP12004 261 aa16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 UGT1A6P19224 532 aa16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 HSF5Q4G112 596 aaPredicted RBP16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 ESRP1Q6NXG1 681 aaKnown RBP16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 RP9Q8TA86 221 aaKnown RBP16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 SDCCAG3Q96C92 435 aa16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 DNAJC28Q9NX36 388 aa16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 SUN2Q9UH99 717 aa16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 HMX2A2RU54 273 aa16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 MYL3P08590 195 aa16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 CHRNA4P43681 627 aa16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 LIMK2P53671 638 aa16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 SEMA5AQ13591 1074 aa16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 NOMO2Q5JPE7 1267 aa16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 MAGEE2Q8TD90 523 aaPredicted RBP16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 NCLNQ969V3 563 aa16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 EMCNQ9ULC0 261 aa16.3■□□□□ 0.2
CACNA2D3-201ENST00000288197 NFKBIAP25963 317 aa16.29■□□□□ 0.2
CACNA2D3-201ENST00000288197 MATKP42679 507 aa16.29■□□□□ 0.2
CACNA2D3-201ENST00000288197 PSMD7P51665 324 aa16.29■□□□□ 0.2
CACNA2D3-201ENST00000288197 MS4A2Q01362 244 aa16.29■□□□□ 0.2
CACNA2D3-201ENST00000288197 MAPRE2Q15555 327 aa16.29■□□□□ 0.2
CACNA2D3-201ENST00000288197 ANKRD52Q8NB46 1076 aa16.29■□□□□ 0.2
CACNA2D3-201ENST00000288197 CDC26Q8NHZ8 85 aa16.29■□□□□ 0.2
CACNA2D3-201ENST00000288197 DNAJB3Q8WWF6 145 aa16.29■□□□□ 0.2
CACNA2D3-201ENST00000288197 ZFRQ96KR1 1074 aaKnown RBP16.29■□□□□ 0.2
CACNA2D3-201ENST00000288197 SPON2Q9BUD6 331 aa16.29■□□□□ 0.2
CACNA2D3-201ENST00000288197 DDX43Q9NXZ2 648 aaKnown RBP16.29■□□□□ 0.2
CACNA2D3-201ENST00000288197 PCDHGB4Q9UN71 923 aa16.29■□□□□ 0.2
CACNA2D3-201ENST00000288197 PCDHGB5Q9Y5G0 923 aa16.29■□□□□ 0.2
CACNA2D3-201ENST00000288197 TLL2Q9Y6L7 1015 aa16.29■□□□□ 0.2
CACNA2D3-201ENST00000288197 C1orf232A0A0U1RR37 186 aa16.29■□□□□ 0.2
CACNA2D3-201ENST00000288197 TCRBV5S1A1TA0A578 114 aa16.29■□□□□ 0.2
CACNA2D3-201ENST00000288197 GSTA4O15217 222 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms