RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 DPYSL2Q16555 572 aa25.64■■□□□ 1.7
PDF-201ENST00000288022 TRIM61Q5EBN2 209 aa25.64■■□□□ 1.7
PDF-201ENST00000288022 TXNRD3NBQ6F5E7 133 aa25.64■■□□□ 1.7
PDF-201ENST00000288022 PCDH20Q8N6Y1 951 aaKnown RBP25.64■■□□□ 1.7
PDF-201ENST00000288022 TEKT4Q8WW24 435 aa25.64■■□□□ 1.7
PDF-201ENST00000288022 CELF6Q96J87 481 aaKnown RBP25.64■■□□□ 1.7
PDF-201ENST00000288022 PCED1AQ9H1Q7 454 aa25.64■■□□□ 1.7
PDF-201ENST00000288022 LCMT1Q9UIC8 334 aa25.64■■□□□ 1.7
PDF-201ENST00000288022 SARDHQ9UL12 918 aa25.64■■□□□ 1.7
PDF-201ENST00000288022 PPM1HQ9ULR3 514 aa25.64■■□□□ 1.7
PDF-201ENST00000288022 FZD4Q9ULV1 537 aa25.64■■□□□ 1.7
PDF-201ENST00000288022 FRYLO94915 3013 aa25.63■■□□□ 1.69
PDF-201ENST00000288022 CXorf51AA0A1B0GTR3 108 aa25.63■■□□□ 1.69
PDF-201ENST00000288022 ZSCAN5CA6NGD5 496 aaPredicted RBP25.63■■□□□ 1.69
PDF-201ENST00000288022 METTL12A8MUP2 240 aa25.63■■□□□ 1.69
PDF-201ENST00000288022 HOXD12P35452 270 aa25.63■■□□□ 1.69
PDF-201ENST00000288022 HCAR3P49019 387 aa25.63■■□□□ 1.69
PDF-201ENST00000288022 METAP1P53582 386 aa25.63■■□□□ 1.69
PDF-201ENST00000288022 KRT81Q14533 505 aa25.63■■□□□ 1.69
PDF-201ENST00000288022 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP25.63■■□□□ 1.69
PDF-201ENST00000288022 CHST14Q8NCH0 376 aa25.63■■□□□ 1.69
PDF-201ENST00000288022 SLC35G2Q8TBE7 412 aa25.63■■□□□ 1.69
PDF-201ENST00000288022 GRIN3AQ8TCU5 1115 aa25.63■■□□□ 1.69
PDF-201ENST00000288022 TM6SF2Q9BZW4 377 aa25.63■■□□□ 1.69
PDF-201ENST00000288022 KLC2Q9H0B6 622 aa25.63■■□□□ 1.69
PDF-201ENST00000288022 MIR1-1HGQ9H1L0 117 aa25.63■■□□□ 1.69
PDF-201ENST00000288022 CHD5Q8TDI0 1954 aa25.63■■□□□ 1.69
PDF-201ENST00000288022 ZNF292O60281 2723 aa25.62■■□□□ 1.69
PDF-201ENST00000288022 PLK4O00444 970 aa25.62■■□□□ 1.69
PDF-201ENST00000288022 GDF9O60383 454 aa25.62■■□□□ 1.69
PDF-201ENST00000288022 FSBPO95073 299 aa25.62■■□□□ 1.69
PDF-201ENST00000288022 CD160O95971 181 aa25.62■■□□□ 1.69
PDF-201ENST00000288022 PRNPP04156 253 aa25.62■■□□□ 1.69
PDF-201ENST00000288022 NDST2P52849 883 aa25.62■■□□□ 1.69
PDF-201ENST00000288022 SERINC3Q13530 473 aa25.62■■□□□ 1.69
PDF-201ENST00000288022 MESDQ14696 234 aa25.62■■□□□ 1.69
PDF-201ENST00000288022 CARD16Q5EG05 197 aa25.62■■□□□ 1.69
PDF-201ENST00000288022 PEAR1Q5VY43 1037 aaPredicted RBP25.62■■□□□ 1.69
PDF-201ENST00000288022 DPY19L3Q6ZPD9 716 aa25.62■■□□□ 1.69
PDF-201ENST00000288022 RABEPKQ7Z6M1 372 aa25.62■■□□□ 1.69
PDF-201ENST00000288022 CPNE8Q86YQ8 564 aa25.62■■□□□ 1.69
PDF-201ENST00000288022 RHOT2Q8IXI1 618 aa25.62■■□□□ 1.69
PDF-201ENST00000288022 RYBPQ8N488 228 aaPredicted RBP25.62■■□□□ 1.69
PDF-201ENST00000288022 CEP76Q8TAP6 659 aa25.62■■□□□ 1.69
PDF-201ENST00000288022 PANX2Q96RD6 677 aa25.62■■□□□ 1.69
PDF-201ENST00000288022 NUSAP1Q9BXS6 441 aaKnown RBP25.62■■□□□ 1.69
PDF-201ENST00000288022 SUSD2Q9UGT4 822 aa25.62■■□□□ 1.69
PDF-201ENST00000288022 IL36AQ9UHA7 158 aa25.62■■□□□ 1.69
PDF-201ENST00000288022 CDV3Q9UKY7 258 aaKnown RBP25.62■■□□□ 1.69
PDF-201ENST00000288022 ARHGAP42A6NI28 874 aa25.61■■□□□ 1.69
PDF-201ENST00000288022 LRRC72A6NJI9 287 aa25.61■■□□□ 1.69
PDF-201ENST00000288022 KPNA3O00505 521 aaPredicted RBP25.61■■□□□ 1.69
PDF-201ENST00000288022 ZNF821O75541 412 aaPredicted RBP25.61■■□□□ 1.69
PDF-201ENST00000288022 CTSLP07711 333 aa25.61■■□□□ 1.69
PDF-201ENST00000288022 GNSP15586 552 aa25.61■■□□□ 1.69
PDF-201ENST00000288022 CDH6P55285 790 aa25.61■■□□□ 1.69
PDF-201ENST00000288022 DPYSQ14117 519 aa25.61■■□□□ 1.69
PDF-201ENST00000288022 DUOXA1Q1HG43 343 aa25.61■■□□□ 1.69
PDF-201ENST00000288022 RSPO4Q2I0M5 234 aaPredicted RBP25.61■■□□□ 1.69
PDF-201ENST00000288022 POLNQ7Z5Q5 900 aa25.61■■□□□ 1.69
PDF-201ENST00000288022 OR14C36Q8NHC7 312 aa25.61■■□□□ 1.69
PDF-201ENST00000288022 ISG20Q96AZ6 181 aaKnown RBP25.61■■□□□ 1.69
PDF-201ENST00000288022 SLC39A8Q9C0K1 460 aa25.61■■□□□ 1.69
PDF-201ENST00000288022 LRRC19Q9H756 370 aa25.61■■□□□ 1.69
PDF-201ENST00000288022 PCDH18Q9HCL0 1135 aa25.61■■□□□ 1.69
PDF-201ENST00000288022 RXFP3Q9NSD7 469 aa25.61■■□□□ 1.69
PDF-201ENST00000288022 EVLQ9UI08 416 aaPredicted RBP25.61■■□□□ 1.69
PDF-201ENST00000288022 EIF2B4Q9UI10 523 aaKnown RBP25.61■■□□□ 1.69
PDF-201ENST00000288022 INTUQ9ULD6 942 aa25.61■■□□□ 1.69
PDF-201ENST00000288022 DFFAO00273 331 aa25.6■■□□□ 1.69
PDF-201ENST00000288022 DRD3P35462 400 aa25.6■■□□□ 1.69
PDF-201ENST00000288022 CYLC1P35663 651 aaPredicted RBP25.6■■□□□ 1.69
PDF-201ENST00000288022 MAGEA1P43355 309 aa25.6■■□□□ 1.69
PDF-201ENST00000288022 CCNHP51946 323 aaPredicted RBP25.6■■□□□ 1.69
PDF-201ENST00000288022 IRX4P78413 519 aa25.6■■□□□ 1.69
PDF-201ENST00000288022 CNTN1Q12860 1018 aa25.6■■□□□ 1.69
PDF-201ENST00000288022 SPA17Q15506 151 aa25.6■■□□□ 1.69
PDF-201ENST00000288022 ARSIQ5FYB1 569 aa25.6■■□□□ 1.69
PDF-201ENST00000288022 ZFYVE27Q5T4F4 411 aa25.6■■□□□ 1.69
PDF-201ENST00000288022 NCEH1Q6PIU2 408 aa25.6■■□□□ 1.69
PDF-201ENST00000288022 CCDC170Q8IYT3 715 aa25.6■■□□□ 1.69
PDF-201ENST00000288022 TMIEQ8NEW7 156 aa25.6■■□□□ 1.69
PDF-201ENST00000288022 NETO1Q8TDF5 533 aa25.6■■□□□ 1.69
PDF-201ENST00000288022 RFFLQ8WZ73 363 aa25.6■■□□□ 1.69
PDF-201ENST00000288022 DNASE2BQ8WZ79 361 aa25.6■■□□□ 1.69
PDF-201ENST00000288022 CSPG4P5Q96PW8 444 aa25.6■■□□□ 1.69
PDF-201ENST00000288022 HEPHQ9BQS7 1158 aa25.6■■□□□ 1.69
PDF-201ENST00000288022 EDEM2Q9BV94 578 aa25.6■■□□□ 1.69
PDF-201ENST00000288022 DYRK4Q9NR20 520 aa25.6■■□□□ 1.69
PDF-201ENST00000288022 ZBTB32Q9Y2Y4 487 aaPredicted RBP25.6■■□□□ 1.69
PDF-201ENST00000288022 LNP1A1A4G5 178 aa25.59■■□□□ 1.69
PDF-201ENST00000288022 TMCC1O94876 653 aa25.59■■□□□ 1.69
PDF-201ENST00000288022 AMPD1P23109 780 aa25.59■■□□□ 1.69
PDF-201ENST00000288022 PAPOLAP51003 745 aaKnown RBP25.59■■□□□ 1.69
PDF-201ENST00000288022 KIAA0895LQ68EN5 471 aa25.59■■□□□ 1.69
PDF-201ENST00000288022 SLC23A3Q6PIS1 610 aa25.59■■□□□ 1.69
PDF-201ENST00000288022 TMCO3Q6UWJ1 677 aa25.59■■□□□ 1.69
PDF-201ENST00000288022 ZCCHC9Q8N567 271 aaKnown RBP25.59■■□□□ 1.69
PDF-201ENST00000288022 NPWQ8N729 165 aa25.59■■□□□ 1.69
PDF-201ENST00000288022 NETO2Q8NC67 525 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms