RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 CDHR5Q9HBB8 845 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 NCKAP1Q9Y2A7 1128 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 MEMO1Q9Y316 297 aa8.84□□□□□ -0.99
NIPBL-201ENST00000282516 GP5P40197 560 aa8.84□□□□□ -1
NIPBL-201ENST00000282516 TNK2Q07912 1038 aa8.84□□□□□ -1
NIPBL-201ENST00000282516 ZC2HC1CQ53FD0 456 aaPredicted RBP8.84□□□□□ -1
NIPBL-201ENST00000282516 ZNF484Q5JVG2 852 aa8.84□□□□□ -1
NIPBL-201ENST00000282516 RETSATQ6NUM9 610 aa8.84□□□□□ -1
NIPBL-201ENST00000282516 USP45Q70EL2 814 aa8.84□□□□□ -1
NIPBL-201ENST00000282516 SPAG16Q8N0X2 631 aa8.84□□□□□ -1
NIPBL-201ENST00000282516 MRTO4Q9UKD2 239 aaKnown RBP8.84□□□□□ -1
NIPBL-201ENST00000282516 KNL1Q8NG31 2342 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 SLC12A8A0AV02 714 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 HACD1B0YJ81 288 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 CHST10O43529 356 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 XYLBO75191 536 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 CETPP11597 493 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 HOXC12P31275 282 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 ZNF135P52742 658 aaPredicted RBP8.83□□□□□ -1
NIPBL-201ENST00000282516 BNIP2Q12982 314 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 CHRDL2Q6WN34 429 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 TMPRSS11AQ6ZMR5 421 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 SPOCD1Q6ZMY3 1216 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 KLHL23Q8NBE8 558 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 KCNF1Q9H3M0 494 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 SMURF2Q9HAU4 748 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 RGSL1A5PLK6 1076 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 CARNS1A5YM72 827 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 DCDC2CA8MYV0 355 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 KRT36O76013 467 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 ITIH1P19827 911 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 ZFP69Q49AA0 526 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.83□□□□□ -1
NIPBL-201ENST00000282516 GPALPP1Q8IXQ4 340 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 PTCD2Q8WV60 388 aaKnown RBP8.83□□□□□ -1
NIPBL-201ENST00000282516 ITGA11Q9UKX5 1188 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 SLC12A4Q9UP95 1085 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 GRIP1Q9Y3R0 1128 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 COMMD3-BMI1R4GMX3 469 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 THRBP10828 461 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 DBTP11182 482 aaKnown RBP8.83□□□□□ -1
NIPBL-201ENST00000282516 DGKAP23743 735 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 FXR2P51116 673 aaKnown RBP eCLIP8.83□□□□□ -16e-7■■■■□ 21.6
NIPBL-201ENST00000282516 MYL6P60660 151 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 GRSF1Q12849 480 aaKnown RBP eCLIP8.83□□□□□ -1
NIPBL-201ENST00000282516 ABRQ12979 859 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 TIMMDC1Q9NPL8 285 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 MTMR4Q9NYA4 1195 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 MLXQ9UH92 298 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 SORCS3Q9UPU3 1222 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 MFHAS1Q9Y4C4 1052 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 TOP3BO95985 862 aaKnown RBP8.83□□□□□ -1
NIPBL-201ENST00000282516 THOP1P52888 689 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 SUZ12Q15022 739 aaKnown RBP8.83□□□□□ -1
NIPBL-201ENST00000282516 ACAP1Q15027 740 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 PTPAQ15257 358 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 SULT1C3Q6IMI6 304 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 JAZF1Q86VZ6 243 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 SRBD1Q8N5C6 995 aaKnown RBP8.83□□□□□ -1
NIPBL-201ENST00000282516 BPIFB6Q8NFQ5 453 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 SMARCD1Q96GM5 515 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 TMEM121Q9BTD3 319 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 KCNN2Q9H2S1 579 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 AGPAT3Q9NRZ7 376 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 UPB1Q9UBR1 384 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 SAMD4AQ9UPU9 718 aaKnown RBP8.83□□□□□ -1
NIPBL-201ENST00000282516 GTPBP1O00178 669 aaKnown RBP8.83□□□□□ -1
NIPBL-201ENST00000282516 SIN3BO75182 1162 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 VIL1P09327 827 aaKnown RBP8.83□□□□□ -1
NIPBL-201ENST00000282516 PAX7P23759 505 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 RAB27AP51159 221 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 PEX6Q13608 980 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 BAATQ14032 418 aaPredicted RBP8.83□□□□□ -1
NIPBL-201ENST00000282516 GNASQ5JWF2 1037 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 TC2NQ8N9U0 490 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 AKAP1Q92667 903 aaKnown RBP eCLIP8.83□□□□□ -1
NIPBL-201ENST00000282516 YME1L1Q96TA2 773 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 CCDC28BQ9BUN5 200 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 OR7A10O76100 309 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 B3GAT3O94766 335 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 IFNA16P05015 189 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 MAPK10P53779 464 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 USP46P62068 366 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 DLG4P78352 724 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 MRPS22P82650 360 aaKnown RBP8.83□□□□□ -1
NIPBL-201ENST00000282516 CDK16Q00536 496 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 SUSD4Q5VX71 490 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 ACOT1Q86TX2 421 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 FAM126AQ9BYI3 521 aaPredicted RBP8.83□□□□□ -1
NIPBL-201ENST00000282516 ATF5Q9Y2D1 282 aaPredicted RBP8.83□□□□□ -1
NIPBL-201ENST00000282516 HECW2Q9P2P5 1572 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 ULK1O75385 1050 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 PRH1P02810 166 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 SLC45A4Q5BKX6 768 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 DOK6Q6PKX4 331 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 RAB11FIP2Q7L804 512 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 FSTL5Q8N475 847 aaPredicted RBP8.83□□□□□ -1
NIPBL-201ENST00000282516 APOL2Q9BQE5 337 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 TTLL2Q9BWV7 592 aa8.83□□□□□ -1
NIPBL-201ENST00000282516 OSBPL11Q9BXB4 747 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms