RNA–Protein interactions for RNA: ENST00000278916.7

CHEK1-201, Transcript of checkpoint kinase 1, humanhuman

TSL 5 BASIC

Gene CHEK1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-201ENST00000278916 IFI16Q16666 785 aaKnown RBP12.03□□□□□ -0.48
CHEK1-201ENST00000278916 RETSATQ6NUM9 610 aa12.03□□□□□ -0.48
CHEK1-201ENST00000278916 C22orf39Q6P5X5 142 aa12.03□□□□□ -0.48
CHEK1-201ENST00000278916 KATNAL2Q8IYT4 538 aa12.03□□□□□ -0.48
CHEK1-201ENST00000278916 PLD5Q8N7P1 536 aa12.03□□□□□ -0.48
CHEK1-201ENST00000278916 GRIN3AQ8TCU5 1115 aa12.03□□□□□ -0.48
CHEK1-201ENST00000278916 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.03□□□□□ -0.48
CHEK1-201ENST00000278916 FAF2Q96CS3 445 aa12.03□□□□□ -0.48
CHEK1-201ENST00000278916 MAK16Q9BXY0 300 aaKnown RBP12.03□□□□□ -0.48
CHEK1-201ENST00000278916 PRDM16Q9HAZ2 1276 aa12.03□□□□□ -0.48
CHEK1-201ENST00000278916 SP110Q9HB58 689 aa12.03□□□□□ -0.48
CHEK1-201ENST00000278916 DDX56Q9NY93 547 aaKnown RBP12.03□□□□□ -0.48
CHEK1-201ENST00000278916 RCOR3Q9P2K3 495 aaPredicted RBP12.03□□□□□ -0.48
CHEK1-201ENST00000278916 CYP8B1Q9UNU6 501 aa12.03□□□□□ -0.48
CHEK1-201ENST00000278916 PCDHA3Q9Y5H8 950 aa12.03□□□□□ -0.48
CHEK1-201ENST00000278916 SDK1Q7Z5N4 2213 aa12.02□□□□□ -0.49
CHEK1-201ENST00000278916 EDDM13A0A1B0GTR0 161 aa12.02□□□□□ -0.49
CHEK1-201ENST00000278916 TTC24A2A3L6 582 aaPredicted RBP12.02□□□□□ -0.49
CHEK1-201ENST00000278916 NPC1O15118 1278 aa12.02□□□□□ -0.49
CHEK1-201ENST00000278916 HRO43593 1189 aa12.02□□□□□ -0.49
CHEK1-201ENST00000278916 ALDH1A2O94788 518 aa12.02□□□□□ -0.49
CHEK1-201ENST00000278916 ZRANB2O95218 330 aaKnown RBP eCLIP12.02□□□□□ -0.49
CHEK1-201ENST00000278916 PEX5P50542 639 aa12.02□□□□□ -0.49
CHEK1-201ENST00000278916 ZNF135P52742 658 aaPredicted RBP12.02□□□□□ -0.49
CHEK1-201ENST00000278916 DCAF12L1Q5VU92 463 aa12.02□□□□□ -0.49
CHEK1-201ENST00000278916 RASSF3Q86WH2 238 aa12.02□□□□□ -0.49
CHEK1-201ENST00000278916 RYBPQ8N488 228 aaPredicted RBP12.02□□□□□ -0.49
CHEK1-201ENST00000278916 ATPAF2Q8N5M1 289 aa12.02□□□□□ -0.49
CHEK1-201ENST00000278916 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.02□□□□□ -0.49
CHEK1-201ENST00000278916 CAMKK1Q8N5S9 505 aa12.02□□□□□ -0.49
CHEK1-201ENST00000278916 DEFB119Q8N690 84 aa12.02□□□□□ -0.49
CHEK1-201ENST00000278916 OR2A12Q8NGT7 310 aa12.02□□□□□ -0.49
CHEK1-201ENST00000278916 OR2T3Q8NH03 318 aa12.02□□□□□ -0.49
CHEK1-201ENST00000278916 SIPA1Q96FS4 1042 aa12.02□□□□□ -0.49
CHEK1-201ENST00000278916 FAM118BQ9BPY3 351 aa12.02□□□□□ -0.49
CHEK1-201ENST00000278916 PDFQ9HBH1 243 aa12.02□□□□□ -0.49
CHEK1-201ENST00000278916 DTLQ9NZJ0 730 aa12.02□□□□□ -0.49
CHEK1-201ENST00000278916 UBA2Q9UBT2 640 aaPredicted RBP12.02□□□□□ -0.49
CHEK1-201ENST00000278916 IPO11Q9UI26 975 aaKnown RBP12.02□□□□□ -0.49
CHEK1-201ENST00000278916 SARDHQ9UL12 918 aa12.02□□□□□ -0.49
CHEK1-201ENST00000278916 APOL1O14791 398 aa12.01□□□□□ -0.49
CHEK1-201ENST00000278916 MID1O15344 667 aa12.01□□□□□ -0.49
CHEK1-201ENST00000278916 DDX3YO15523 660 aaKnown RBP12.01□□□□□ -0.49
CHEK1-201ENST00000278916 CST8O60676 142 aa12.01□□□□□ -0.49
CHEK1-201ENST00000278916 PRAMEF11O60813 436 aa12.01□□□□□ -0.49
CHEK1-201ENST00000278916 IL1BP01584 269 aa12.01□□□□□ -0.49
CHEK1-201ENST00000278916 CTSLP07711 333 aa12.01□□□□□ -0.49
CHEK1-201ENST00000278916 PYGMP11217 842 aa12.01□□□□□ -0.49
CHEK1-201ENST00000278916 PECAM1P16284 738 aaPredicted RBP12.01□□□□□ -0.49
CHEK1-201ENST00000278916 BCKDHBP21953 392 aa12.01□□□□□ -0.49
CHEK1-201ENST00000278916 SERPINB6P35237 376 aa12.01□□□□□ -0.49
CHEK1-201ENST00000278916 RPS14P62263 151 aaKnown RBP12.01□□□□□ -0.49
CHEK1-201ENST00000278916 PAFAH1B3Q15102 231 aaKnown RBP12.01□□□□□ -0.49
CHEK1-201ENST00000278916 CYTH1Q15438 398 aa12.01□□□□□ -0.49
CHEK1-201ENST00000278916 DPY19L3Q6ZPD9 716 aa12.01□□□□□ -0.49
CHEK1-201ENST00000278916 LONP2Q86WA8 852 aa12.01□□□□□ -0.49
CHEK1-201ENST00000278916 SYCE1Q8N0S2 351 aa12.01□□□□□ -0.49
CHEK1-201ENST00000278916 ZNF419Q96HQ0 510 aaPredicted RBP12.01□□□□□ -0.49
CHEK1-201ENST00000278916 FAM129BQ96TA1 746 aa12.01□□□□□ -0.49
CHEK1-201ENST00000278916 RETREG1Q9H6L5 497 aa12.01□□□□□ -0.49
CHEK1-201ENST00000278916 ZSCAN32Q9NX65 697 aa12.01□□□□□ -0.49
CHEK1-201ENST00000278916 SERGEFQ9UGK8 458 aa12.01□□□□□ -0.49
CHEK1-201ENST00000278916 SUN2Q9UH99 717 aa12.01□□□□□ -0.49
CHEK1-201ENST00000278916 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.01□□□□□ -0.49
CHEK1-201ENST00000278916 CFAP54Q96N23 3096 aa12.01□□□□□ -0.49
CHEK1-201ENST00000278916 hCG_1818297A0A087WSY0 165 aa12□□□□□ -0.49
CHEK1-201ENST00000278916 ENC1O14682 589 aa12□□□□□ -0.49
CHEK1-201ENST00000278916 MUSKO15146 869 aa12□□□□□ -0.49
CHEK1-201ENST00000278916 INSIG1O15503 277 aa12□□□□□ -0.49
CHEK1-201ENST00000278916 ZBTB24O43167 697 aaPredicted RBP12□□□□□ -0.49
CHEK1-201ENST00000278916 CTNNA2P26232 953 aa12□□□□□ -0.49
CHEK1-201ENST00000278916 RGRP47804 291 aa12□□□□□ -0.49
CHEK1-201ENST00000278916 NUBP1P53384 320 aa12□□□□□ -0.49
CHEK1-201ENST00000278916 PTPN5P54829 565 aa12□□□□□ -0.49
CHEK1-201ENST00000278916 RWDD2BP57060 319 aa12□□□□□ -0.49
CHEK1-201ENST00000278916 SLC10A7Q0GE19 358 aa12□□□□□ -0.49
CHEK1-201ENST00000278916 PRR23BQ6ZRT6 265 aa12□□□□□ -0.49
CHEK1-201ENST00000278916 WDR5BQ86VZ2 330 aa12□□□□□ -0.49
CHEK1-201ENST00000278916 RCOR2Q8IZ40 523 aa12□□□□□ -0.49
CHEK1-201ENST00000278916 LZTR1Q8N653 840 aa12□□□□□ -0.49
CHEK1-201ENST00000278916 TSEN2Q8NCE0 465 aaKnown RBP12□□□□□ -0.49
CHEK1-201ENST00000278916 TRIM58Q8NG06 486 aa12□□□□□ -0.49
CHEK1-201ENST00000278916 EXD1Q8NHP7 514 aa12□□□□□ -0.49
CHEK1-201ENST00000278916 ZNF592Q92610 1267 aa12□□□□□ -0.49
CHEK1-201ENST00000278916 PRCCQ92733 491 aaPredicted RBP12□□□□□ -0.49
CHEK1-201ENST00000278916 LGMNQ99538 433 aa12□□□□□ -0.49
CHEK1-201ENST00000278916 CEP41Q9BYV8 373 aa12□□□□□ -0.49
CHEK1-201ENST00000278916 ZDHHC6Q9H6R6 413 aa12□□□□□ -0.49
CHEK1-201ENST00000278916 C10orf88Q9H8K7 445 aa12□□□□□ -0.49
CHEK1-201ENST00000278916 DONSONQ9NYP3 566 aa12□□□□□ -0.49
CHEK1-201ENST00000278916 NUMA1Q14980 2115 aa12□□□□□ -0.49
CHEK1-201ENST00000278916 DMXL1Q9Y485 3027 aa12□□□□□ -0.49
CHEK1-201ENST00000278916 A0A1W2PP55 124 aa12□□□□□ -0.49
CHEK1-201ENST00000278916 CCDC66A2RUB6 948 aa12□□□□□ -0.49
CHEK1-201ENST00000278916 KIF2AO00139 706 aaPredicted RBP12□□□□□ -0.49
CHEK1-201ENST00000278916 MAFKO60675 156 aa12□□□□□ -0.49
CHEK1-201ENST00000278916 ATP1A1P05023 1023 aaKnown RBP12□□□□□ -0.49
CHEK1-201ENST00000278916 GARSP41250 739 aaKnown RBP12□□□□□ -0.49
CHEK1-201ENST00000278916 TPMTP51580 245 aa12□□□□□ -0.49
CHEK1-201ENST00000278916 CCNHP51946 323 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms