RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 KNDC1Q76NI1 1749 aa11.42□□□□□ -0.58
USP6NL-201ENST00000277575 A0A087X1B8 175 aa11.42□□□□□ -0.58
USP6NL-201ENST00000277575 ADAMTS3O15072 1205 aa11.42□□□□□ -0.58
USP6NL-201ENST00000277575 MSI1O43347 362 aaKnown RBP11.42□□□□□ -0.58
USP6NL-201ENST00000277575 HSPA13P48723 471 aa11.42□□□□□ -0.58
USP6NL-201ENST00000277575 CLCN5P51795 746 aa11.42□□□□□ -0.58
USP6NL-201ENST00000277575 CLCNKBP51801 687 aa11.42□□□□□ -0.58
USP6NL-201ENST00000277575 SLC10A6Q3KNW5 377 aa11.42□□□□□ -0.58
USP6NL-201ENST00000277575 PMF1Q6P1K2 205 aa11.42□□□□□ -0.58
USP6NL-201ENST00000277575 RIPOR1Q6ZS17 1223 aa11.42□□□□□ -0.58
USP6NL-201ENST00000277575 BRI3BPQ8WY22 251 aa11.42□□□□□ -0.58
USP6NL-201ENST00000277575 PPP1R16AQ96I34 528 aa11.42□□□□□ -0.58
USP6NL-201ENST00000277575 CSPG4P5Q96PW8 444 aa11.42□□□□□ -0.58
USP6NL-201ENST00000277575 TSEN34Q9BSV6 310 aaKnown RBP11.42□□□□□ -0.58
USP6NL-201ENST00000277575 TRPC4Q9UBN4 977 aa11.42□□□□□ -0.58
USP6NL-201ENST00000277575 CROTQ9UKG9 612 aa11.42□□□□□ -0.58
USP6NL-201ENST00000277575 TMCC3Q9ULS5 477 aa11.42□□□□□ -0.58
USP6NL-201ENST00000277575 PCDHB9Q9Y5E1 797 aa11.42□□□□□ -0.58
USP6NL-201ENST00000277575 ACTL7BQ9Y614 415 aa11.42□□□□□ -0.58
USP6NL-201ENST00000277575 ALOX15BO15296 676 aa11.42□□□□□ -0.58
USP6NL-201ENST00000277575 CA12O43570 354 aa11.42□□□□□ -0.58
USP6NL-201ENST00000277575 USP1O94782 785 aa11.42□□□□□ -0.58
USP6NL-201ENST00000277575 GLUD1P00367 558 aa11.42□□□□□ -0.58
USP6NL-201ENST00000277575 ATP6V1B1P15313 513 aa11.42□□□□□ -0.58
USP6NL-201ENST00000277575 CSTF3Q12996 717 aaKnown RBP11.42□□□□□ -0.58
USP6NL-201ENST00000277575 PHKG1Q16816 387 aa11.42□□□□□ -0.58
USP6NL-201ENST00000277575 DNAJC14Q6Y2X3 702 aaPredicted RBP11.42□□□□□ -0.58
USP6NL-201ENST00000277575 SLC26A9Q7LBE3 791 aa11.42□□□□□ -0.58
USP6NL-201ENST00000277575 NECAB2Q7Z6G3 386 aa11.42□□□□□ -0.58
USP6NL-201ENST00000277575 MICU2Q8IYU8 434 aa11.42□□□□□ -0.58
USP6NL-201ENST00000277575 PIWIL2Q8TC59 973 aaKnown RBP11.42□□□□□ -0.58
USP6NL-201ENST00000277575 KLHL5Q96PQ7 755 aa11.42□□□□□ -0.58
USP6NL-201ENST00000277575 DLGAP2Q9P1A6 1054 aa11.42□□□□□ -0.58
USP6NL-201ENST00000277575 AGO1Q9UL18 857 aaKnown RBP11.42□□□□□ -0.58
USP6NL-201ENST00000277575 PCDHA11Q9Y5I1 949 aa11.42□□□□□ -0.58
USP6NL-201ENST00000277575 TNPO3Q9Y5L0 923 aaKnown RBP11.42□□□□□ -0.58
USP6NL-201ENST00000277575 C1orf232A0A0U1RR37 186 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 MRASO14807 208 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 RPN2P04844 631 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 SPATA31D3P0C874 917 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 TTPAP49638 278 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 CLK1P49759 484 aaKnown RBP11.41□□□□□ -0.58
USP6NL-201ENST00000277575 THOP1P52888 689 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 MRPS35P82673 323 aaKnown RBP11.41□□□□□ -0.58
USP6NL-201ENST00000277575 PFKPQ01813 784 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 PWP1Q13610 501 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 NOMO1Q15155 1222 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 TTMPQ5BVD1 217 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 POTEHQ6S545 545 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 SPATA31D4Q6ZUB0 917 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 SLAIN1Q8ND83 568 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 CKAP2Q8WWK9 683 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 NDRG1Q92597 394 aaKnown RBP11.41□□□□□ -0.58
USP6NL-201ENST00000277575 SIKE1Q9BRV8 207 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 FZD8Q9H461 694 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 MOXD2PA6NHM9 499 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 FKBP6O75344 327 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 C22orf31O95567 290 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 IFNA14P01570 189 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 NUDT17P0C025 328 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 IRF8Q02556 426 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 GBE1Q04446 702 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 ACSM2AQ08AH3 577 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 POM121L1PQ3SYA9 428 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 ACSM2BQ68CK6 577 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 C11orf74Q86VG3 221 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 SNX32Q86XE0 403 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 RNF148Q8N7C7 305 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 PCDHGC3Q9UN70 934 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 R3HDM2Q9Y2K5 976 aaKnown RBP11.41□□□□□ -0.58
USP6NL-201ENST00000277575 A0A1W2PQH9 124 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 DYRK3O43781 588 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 EFCAB14O75071 495 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 LAG3P18627 525 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 TFEBP19484 476 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 ATP6V1B2P21281 511 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 LPOP22079 712 aaPredicted RBP11.41□□□□□ -0.58
USP6NL-201ENST00000277575 RPL14P50914 215 aaKnown RBP11.41□□□□□ -0.58
USP6NL-201ENST00000277575 PRKCQQ04759 706 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 MON1BQ7L1V2 547 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 METTL3Q86U44 580 aaKnown RBP11.41□□□□□ -0.58
USP6NL-201ENST00000277575 PLD3Q8IV08 490 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 SLC41A1Q8IVJ1 513 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 DAW1Q8N136 415 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 ZNF786Q8N393 782 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 SLC4A11Q8NBS3 891 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 BTN2A3PQ96KV6 586 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 NSMCE2Q96MF7 247 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 BPIFA1Q9NP55 256 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 SEMA4BQ9NPR2 832 aaPredicted RBP11.41□□□□□ -0.58
USP6NL-201ENST00000277575 STXBP5LQ9Y2K9 1186 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 ONECUT3O60422 494 aaPredicted RBP11.41□□□□□ -0.58
USP6NL-201ENST00000277575 AVILO75366 819 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 SH3BGRLO75368 114 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 CBX6O95503 412 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 ANXA5P08758 320 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 ATP5F1P24539 256 aaPredicted RBP11.41□□□□□ -0.58
USP6NL-201ENST00000277575 ADSSP30520 456 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 DSG1Q02413 1049 aa11.41□□□□□ -0.58
USP6NL-201ENST00000277575 CTBP1Q13363 440 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms