RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 FZD10Q9ULW2 581 aa14.75□□□□□ -0.05
HMGN3-201ENST00000275036 BTBD3Q9Y2F9 522 aa14.75□□□□□ -0.05
HMGN3-201ENST00000275036 ANKRD6Q9Y2G4 727 aa14.75□□□□□ -0.05
HMGN3-201ENST00000275036 IGF2RP11717 2491 aa14.75□□□□□ -0.05
HMGN3-201ENST00000275036 CACNA1BQ00975 2339 aa14.75□□□□□ -0.05
HMGN3-201ENST00000275036 A0A1W2PQJ5 194 aa14.74□□□□□ -0.05
HMGN3-201ENST00000275036 ALOX15BO15296 676 aa14.74□□□□□ -0.05
HMGN3-201ENST00000275036 RTN2O75298 545 aa14.74□□□□□ -0.05
HMGN3-201ENST00000275036 CER1O95813 267 aa14.74□□□□□ -0.05
HMGN3-201ENST00000275036 FTLP02792 175 aaPredicted RBP14.74□□□□□ -0.05
HMGN3-201ENST00000275036 GZMAP12544 262 aa14.74□□□□□ -0.05
HMGN3-201ENST00000275036 CTSKP43235 329 aa14.74□□□□□ -0.05
HMGN3-201ENST00000275036 MAPKAPK2P49137 400 aa14.74□□□□□ -0.05
HMGN3-201ENST00000275036 TPM4P67936 248 aa14.74□□□□□ -0.05
HMGN3-201ENST00000275036 CNTN1Q12860 1018 aa14.74□□□□□ -0.05
HMGN3-201ENST00000275036 SFSWAPQ12872 951 aaKnown RBP14.74□□□□□ -0.05
HMGN3-201ENST00000275036 ST3GAL2Q16842 350 aa14.74□□□□□ -0.05
HMGN3-201ENST00000275036 AGBL4Q5VU57 503 aa14.74□□□□□ -0.05
HMGN3-201ENST00000275036 C22orf39Q6P5X5 142 aa14.74□□□□□ -0.05
HMGN3-201ENST00000275036 LRSAM1Q6UWE0 723 aa14.74□□□□□ -0.05
HMGN3-201ENST00000275036 DBX2Q6ZNG2 339 aa14.74□□□□□ -0.05
HMGN3-201ENST00000275036 TMC6Q7Z403 805 aa14.74□□□□□ -0.05
HMGN3-201ENST00000275036 CHST14Q8NCH0 376 aa14.74□□□□□ -0.05
HMGN3-201ENST00000275036 OR14C36Q8NHC7 312 aa14.74□□□□□ -0.05
HMGN3-201ENST00000275036 ARHGEF2Q92974 986 aaKnown RBP14.74□□□□□ -0.05
HMGN3-201ENST00000275036 NOL6Q9H6R4 1146 aaKnown RBP14.74□□□□□ -0.05
HMGN3-201ENST00000275036 KLK13Q9UKR3 277 aa14.74□□□□□ -0.05
HMGN3-201ENST00000275036 A0A1W2PR77 199 aa14.73□□□□□ -0.05
HMGN3-201ENST00000275036 ANKRD62A6NC57 917 aa14.73□□□□□ -0.05
HMGN3-201ENST00000275036 LRRC72A6NJI9 287 aa14.73□□□□□ -0.05
HMGN3-201ENST00000275036 H0Y8X5 98 aa14.73□□□□□ -0.05
HMGN3-201ENST00000275036 GOLGA6L19H0YKK7 550 aa14.73□□□□□ -0.05
HMGN3-201ENST00000275036 ZNF883P0CG24 379 aa14.73□□□□□ -0.05
HMGN3-201ENST00000275036 L1CAMP32004 1257 aa14.73□□□□□ -0.05
HMGN3-201ENST00000275036 CHRNA3P32297 505 aa14.73□□□□□ -0.05
HMGN3-201ENST00000275036 SERPINH1P50454 418 aaKnown RBP14.73□□□□□ -0.05
HMGN3-201ENST00000275036 CLCN6P51797 869 aa14.73□□□□□ -0.05
HMGN3-201ENST00000275036 TRIP6Q15654 476 aaKnown RBP14.73□□□□□ -0.05
HMGN3-201ENST00000275036 PPP1R2P3Q6NXS1 205 aa14.73□□□□□ -0.05
HMGN3-201ENST00000275036 IL27RAQ6UWB1 636 aa14.73□□□□□ -0.05
HMGN3-201ENST00000275036 DPY19L3Q6ZPD9 716 aa14.73□□□□□ -0.05
HMGN3-201ENST00000275036 DSG4Q86SJ6 1040 aa14.73□□□□□ -0.05
HMGN3-201ENST00000275036 GATA6Q92908 595 aa14.73□□□□□ -0.05
HMGN3-201ENST00000275036 ARRDC3Q96B67 414 aa14.73□□□□□ -0.05
HMGN3-201ENST00000275036 PEBP4Q96S96 227 aa14.73□□□□□ -0.05
HMGN3-201ENST00000275036 PARVAQ9NVD7 372 aa14.73□□□□□ -0.05
HMGN3-201ENST00000275036 GPATCH2LQ9NWQ4 482 aa14.73□□□□□ -0.05
HMGN3-201ENST00000275036 TOR4AQ9NXH8 423 aa14.73□□□□□ -0.05
HMGN3-201ENST00000275036 IFNKQ9P0W0 207 aa14.73□□□□□ -0.05
HMGN3-201ENST00000275036 ARHGAP20Q9P2F6 1191 aa14.73□□□□□ -0.05
HMGN3-201ENST00000275036 FCF1Q9Y324 198 aaKnown RBP14.73□□□□□ -0.05
HMGN3-201ENST00000275036 ARID1BQ8NFD5 2236 aaPredicted RBP14.73□□□□□ -0.05
HMGN3-201ENST00000275036 ANKRD36A6QL64 1941 aa14.72□□□□□ -0.05
HMGN3-201ENST00000275036 TDRD6O60522 2096 aaKnown RBP14.72□□□□□ -0.05
HMGN3-201ENST00000275036 TMEM191CA6NGB0 347 aa14.72□□□□□ -0.05
HMGN3-201ENST00000275036 C1QTNF3-AMACRE9PGA6 284 aa14.72□□□□□ -0.05
HMGN3-201ENST00000275036 LATO43561 262 aa14.72□□□□□ -0.05
HMGN3-201ENST00000275036 PLRG1O43660 514 aaKnown RBP14.72□□□□□ -0.05
HMGN3-201ENST00000275036 CREB3O43889 395 aa14.72□□□□□ -0.05
HMGN3-201ENST00000275036 FTH1P19P0C7X4 201 aa14.72□□□□□ -0.05
HMGN3-201ENST00000275036 PSMA2P25787 234 aa14.72□□□□□ -0.05
HMGN3-201ENST00000275036 CCR5P51681 352 aa14.72□□□□□ -0.05
HMGN3-201ENST00000275036 TAS2R38P59533 333 aa14.72□□□□□ -0.05
HMGN3-201ENST00000275036 RACK1P63244 317 aaKnown RBP14.72□□□□□ -0.05
HMGN3-201ENST00000275036 IL9RQ01113 521 aa14.72□□□□□ -0.05
HMGN3-201ENST00000275036 CA9Q16790 459 aa14.72□□□□□ -0.05
HMGN3-201ENST00000275036 ZNF423Q2M1K9 1284 aa14.72□□□□□ -0.05
HMGN3-201ENST00000275036 EFHC2Q5JST6 749 aa14.72□□□□□ -0.05
HMGN3-201ENST00000275036 PRAMEF14Q5SWL7 426 aa14.72□□□□□ -0.05
HMGN3-201ENST00000275036 PIP5KL1Q5T9C9 394 aa14.72□□□□□ -0.05
HMGN3-201ENST00000275036 FAM46CQ5VWP2 391 aa14.72□□□□□ -0.05
HMGN3-201ENST00000275036 RETSATQ6NUM9 610 aa14.72□□□□□ -0.05
HMGN3-201ENST00000275036 UNQ6494/PRO21346Q6UXR6 183 aa14.72□□□□□ -0.05
HMGN3-201ENST00000275036 LEKR1Q6ZMV7 388 aa14.72□□□□□ -0.05
HMGN3-201ENST00000275036 CYP4V2Q6ZWL3 525 aaPredicted RBP14.72□□□□□ -0.05
HMGN3-201ENST00000275036 CHCHD4Q8N4Q1 142 aa14.72□□□□□ -0.05
HMGN3-201ENST00000275036 PNPLA1Q8N8W4 532 aa14.72□□□□□ -0.05
HMGN3-201ENST00000275036 CPLX3Q8WVH0 158 aa14.72□□□□□ -0.05
HMGN3-201ENST00000275036 VOPP1Q96AW1 172 aa14.72□□□□□ -0.05
HMGN3-201ENST00000275036 ZNF653Q96CK0 615 aa14.72□□□□□ -0.05
HMGN3-201ENST00000275036 KLC2Q9H0B6 622 aa14.72□□□□□ -0.05
HMGN3-201ENST00000275036 ISCUQ9H1K1 167 aa14.72□□□□□ -0.05
HMGN3-201ENST00000275036 RETREG1Q9H6L5 497 aa14.72□□□□□ -0.05
HMGN3-201ENST00000275036 CNOT8Q9UFF9 292 aaKnown RBP14.72□□□□□ -0.05
HMGN3-201ENST00000275036 CAPN11Q9UMQ6 739 aa14.72□□□□□ -0.05
HMGN3-201ENST00000275036 WASF2Q9Y6W5 498 aa14.72□□□□□ -0.05
HMGN3-201ENST00000275036 TBC1D3DA0A087WVF3 549 aa14.71□□□□□ -0.05
HMGN3-201ENST00000275036 TBC1D3IA0A087WXS9 549 aa14.71□□□□□ -0.05
HMGN3-201ENST00000275036 TBC1D3EA0A087X179 549 aa14.71□□□□□ -0.05
HMGN3-201ENST00000275036 TBC1D3KA0A087X1G2 549 aa14.71□□□□□ -0.05
HMGN3-201ENST00000275036 TBC1D3FA6NER0 549 aaPredicted RBP14.71□□□□□ -0.05
HMGN3-201ENST00000275036 TBC1D3LB9A6J9 549 aa14.71□□□□□ -0.05
HMGN3-201ENST00000275036 VILLO15195 856 aa14.71□□□□□ -0.05
HMGN3-201ENST00000275036 SLC7A4O43246 635 aa14.71□□□□□ -0.05
HMGN3-201ENST00000275036 GYPCP04921 128 aa14.71□□□□□ -0.05
HMGN3-201ENST00000275036 TBC1D3HP0C7X1 549 aa14.71□□□□□ -0.05
HMGN3-201ENST00000275036 EPHB2P29323 1055 aa14.71□□□□□ -0.05
HMGN3-201ENST00000275036 SLC20A2Q08357 652 aa14.71□□□□□ -0.05
HMGN3-201ENST00000275036 SHBQ15464 509 aa14.71□□□□□ -0.05
HMGN3-201ENST00000275036 TEAD4Q15561 434 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms