RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 AGAP4Q96P64 663 aa9.36□□□□□ -0.91
PDGFC-201ENST00000274071 ADI1Q9BV57 179 aa9.36□□□□□ -0.91
PDGFC-201ENST00000274071 GON7Q9BXV9 100 aa9.36□□□□□ -0.91
PDGFC-201ENST00000274071 ZHX3Q9H4I2 956 aa9.36□□□□□ -0.91
PDGFC-201ENST00000274071 FBXO8Q9NRD0 319 aa9.36□□□□□ -0.91
PDGFC-201ENST00000274071 APEX2Q9UBZ4 518 aa9.36□□□□□ -0.91
PDGFC-201ENST00000274071 DNPEPQ9ULA0 475 aa9.36□□□□□ -0.91
PDGFC-201ENST00000274071 PCDHGA10Q9Y5H3 936 aa9.36□□□□□ -0.91
PDGFC-201ENST00000274071 CYP2D7A0A087X1C5 515 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 FAM155BO75949 473 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 CBLP22681 906 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 CD40LGP29965 261 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 KRT20P35900 424 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 SEPHS1P49903 392 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 PLA2G16P53816 162 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 EN1Q05925 392 aaPredicted RBP9.35□□□□□ -0.91
PDGFC-201ENST00000274071 ZNF33BQ06732 778 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 BST2Q10589 180 aaKnown RBP9.35□□□□□ -0.91
PDGFC-201ENST00000274071 ILF2Q12905 390 aaKnown RBP9.35□□□□□ -0.91
PDGFC-201ENST00000274071 SLC10A2Q12908 348 aaPredicted RBP9.35□□□□□ -0.91
PDGFC-201ENST00000274071 PON2Q15165 354 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 C5orf22Q49AR2 442 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 ESCO2Q56NI9 601 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 LINC00299Q6ZSB3 139 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 LINC00518Q8N0U6 118 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 POC5Q8NA72 575 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 FLCNQ8NFG4 579 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 ZNF384Q8TF68 577 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 SLC44A1Q8WWI5 657 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 MARC2Q969Z3 335 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 SLCO4A1Q96BD0 722 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 USB1Q9BQ65 265 aaKnown RBP9.35□□□□□ -0.91
PDGFC-201ENST00000274071 LPIN3Q9BQK8 851 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 TTYH2Q9BSA4 534 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 BRIP1Q9BX63 1249 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 IFT22Q9H7X7 185 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 ABCB10Q9NRK6 738 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 HOMER2Q9NSB8 354 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 PNPOQ9NVS9 261 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 COPG2Q9UBF2 871 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 ATP6V1HQ9UI12 483 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 ZNF195O14628 629 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 CLIC2O15247 247 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 UGT2B11O75310 529 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 TOM1L1O75674 476 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 SERPINB2P05120 415 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 INHBAP08476 426 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 SNRPAP09012 282 aaKnown RBP9.35□□□□□ -0.91
PDGFC-201ENST00000274071 TMEM191BP0C7N4 346 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 AKR1B1P15121 316 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 JUNBP17275 347 aaPredicted RBP9.35□□□□□ -0.91
PDGFC-201ENST00000274071 EEF1B2P24534 225 aaKnown RBP9.35□□□□□ -0.91
PDGFC-201ENST00000274071 FMO4P31512 558 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 TNNI2P48788 182 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 HLCSP50747 726 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 LAPTM5Q13571 262 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 SLC36A3Q495N2 470 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 CBWD6Q4V339 395 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 CBWD3Q5JTY5 395 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 CBWD5Q5RIA9 395 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 XAF1Q6GPH4 301 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 TXNRD3Q86VQ6 643 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 RHPN2Q8IUC4 686 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 OFCC1Q8IZS5 231 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 PAF1Q8N7H5 531 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 IL17RDQ8NFM7 739 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 NXPE3Q969Y0 559 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 FBXL20Q96IG2 436 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 DMRTB1Q96MA1 342 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 GDF15Q99988 308 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 TCF7L2Q9NQB0 619 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 IL37Q9NZH6 218 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 SHOC2Q9UQ13 582 aa9.35□□□□□ -0.91
PDGFC-201ENST00000274071 KDM3AQ9Y4C1 1321 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 ISPDA4D126 451 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 TRIM49D1C9J1S8 452 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 B4GAT1O43505 415 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 SLITRK3O94933 977 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 SLITRK5O94991 958 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 TDP2O95551 362 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 NR3C1P04150 777 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 CYP2D6P10635 497 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 MAGP20916 626 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 FMO5P49326 533 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 ETV1P50549 477 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 PPP5CP53041 499 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 SRP54P61011 504 aaKnown RBP9.34□□□□□ -0.91
PDGFC-201ENST00000274071 DYNLL1P63167 89 aaKnown RBP9.34□□□□□ -0.91
PDGFC-201ENST00000274071 IKQ13123 557 aaPredicted RBP9.34□□□□□ -0.91
PDGFC-201ENST00000274071 GALNT3Q14435 633 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 CALCRLQ16602 461 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 KCNT1Q5JUK3 1230 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 TEDDM1Q5T9Z0 273 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 ABRAXAS1Q6UWZ7 409 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 SH3BP5LQ7L8J4 393 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 TFAP2DQ7Z6R9 452 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 MFSD2AQ8NA29 543 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 TBCKQ8TEA7 893 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 GTF2H4Q92759 462 aa9.34□□□□□ -0.91
PDGFC-201ENST00000274071 MARK4Q96L34 752 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms