RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 METTL6Q8TCB7 284 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 PPP1R10Q96QC0 940 aaKnown RBP13.9□□□□□ -0.18
NPC1-201ENST00000269228 SOX13Q9UN79 622 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 AVILO75366 819 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 C1RP00736 705 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 CNTN1Q12860 1018 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 ILF2Q12905 390 aaKnown RBP13.9□□□□□ -0.18
NPC1-201ENST00000269228 FBXO22Q8NEZ5 403 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 IRGQQ8WZA9 623 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 B3GALT6Q96L58 329 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 KCTD15Q96SI1 283 aaPredicted RBP13.9□□□□□ -0.18
NPC1-201ENST00000269228 OXCT2Q9BYC2 517 aaPredicted RBP13.9□□□□□ -0.18
NPC1-201ENST00000269228 RMND5AQ9H871 391 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 BRD9Q9H8M2 597 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 ZMYM5Q9UJ78 669 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 PCDHA11Q9Y5I1 949 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 BAIAP3O94812 1187 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 POLE2P56282 527 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 GBE1Q04446 702 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 NFYCQ13952 458 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 RASA2Q15283 850 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 ATP6AP1LQ52LC2 224 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 METTL3Q86U44 580 aaKnown RBP13.9□□□□□ -0.18
NPC1-201ENST00000269228 FAM9CQ8IZT9 166 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 ARNTL2Q8WYA1 636 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 ZNF516Q92618 1163 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 CASP10Q92851 521 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 PARVBQ9HBI1 364 aa13.9□□□□□ -0.18
NPC1-201ENST00000269228 CRYBG1Q9Y4K1 1723 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 ASPAP45381 313 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 GPR1P46091 355 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 CYLC2Q14093 348 aaPredicted RBP13.89□□□□□ -0.19
NPC1-201ENST00000269228 AGKQ53H12 422 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 MILR1Q7Z6M3 343 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 SRLQ86TD4 932 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 GPSM1Q86YR5 675 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 TMEM139Q8IV31 216 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 SLC41A1Q8IVJ1 513 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 PGM2Q96G03 612 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 TCF7L2Q9NQB0 619 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 CLTBP09497 229 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 DGKAP23743 735 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 CHI3L1P36222 383 aaPredicted RBP13.89□□□□□ -0.19
NPC1-201ENST00000269228 DUPD1Q68J44 220 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 ZNF513Q8N8E2 541 aaPredicted RBP13.89□□□□□ -0.19
NPC1-201ENST00000269228 FNIP1Q8TF40 1166 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 ING5Q8WYH8 240 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 ELMO1Q92556 727 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 POMKQ9H5K3 350 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 ALG9Q9H6U8 611 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 ZNF556Q9HAH1 456 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 NOCTQ9UK39 431 aaKnown RBP13.89□□□□□ -0.19
NPC1-201ENST00000269228 R3HDM2Q9Y2K5 976 aaKnown RBP13.89□□□□□ -0.19
NPC1-201ENST00000269228 SH3BGRLO75368 114 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 FGF19O95750 216 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 CYTH1Q15438 398 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 CYP51A1Q16850 503 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 SOWAHAQ2M3V2 549 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 GALNT4Q8N4A0 578 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 OR56A4Q8NGH8 313 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 ART4Q93070 314 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.89□□□□□ -0.19
NPC1-201ENST00000269228 F2P00734 622 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 PIGRP01833 764 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 SHBGP04278 402 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 HSPA1AP0DMV8 641 aaKnown RBP13.89□□□□□ -0.19
NPC1-201ENST00000269228 HSPA1BP0DMV9 641 aaKnown RBP13.89□□□□□ -0.19
NPC1-201ENST00000269228 TACR2P21452 398 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 NOMO1Q15155 1222 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 ATAT1Q5SQI0 421 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 FBXW10Q5XX13 1052 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 MTSS1LQ765P7 747 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 TAC4Q86UU9 113 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 MIER2Q8N344 545 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 TNIP2Q8NFZ5 429 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 SKA1Q96BD8 255 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 NDNQ99608 321 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 EBNA1BP2Q99848 306 aaKnown RBP13.89□□□□□ -0.19
NPC1-201ENST00000269228 COQ4Q9Y3A0 265 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 C4BP0C0L5 1744 aa13.89□□□□□ -0.19
NPC1-201ENST00000269228 HNRNPCL2B2RXH8 293 aa13.88□□□□□ -0.19
NPC1-201ENST00000269228 E9PAM4 449 aa13.88□□□□□ -0.19
NPC1-201ENST00000269228 H3BMM5 538 aa13.88□□□□□ -0.19
NPC1-201ENST00000269228 NRP1O14786 923 aa13.88□□□□□ -0.19
NPC1-201ENST00000269228 MFSD11O43934 449 aa13.88□□□□□ -0.19
NPC1-201ENST00000269228 TBC1D4O60343 1298 aa13.88□□□□□ -0.19
NPC1-201ENST00000269228 CCDC166P0CW27 439 aa13.88□□□□□ -0.19
NPC1-201ENST00000269228 CDH2P19022 906 aaPredicted RBP13.88□□□□□ -0.19
NPC1-201ENST00000269228 KCNA3P22001 575 aa13.88□□□□□ -0.19
NPC1-201ENST00000269228 PTPRNQ16849 979 aa13.88□□□□□ -0.19
NPC1-201ENST00000269228 PATL1Q86TB9 770 aaKnown RBP13.88□□□□□ -0.19
NPC1-201ENST00000269228 HORMAD1Q86X24 394 aa13.88□□□□□ -0.19
NPC1-201ENST00000269228 SHISA4Q96DD7 197 aa13.88□□□□□ -0.19
NPC1-201ENST00000269228 MCRS1Q96EZ8 462 aa13.88□□□□□ -0.19
NPC1-201ENST00000269228 CATSPER2Q96P56 530 aa13.88□□□□□ -0.19
NPC1-201ENST00000269228 FAM126AQ9BYI3 521 aaPredicted RBP13.88□□□□□ -0.19
NPC1-201ENST00000269228 ADNPQ9H2P0 1102 aa13.88□□□□□ -0.19
NPC1-201ENST00000269228 THAP1Q9NVV9 213 aa13.88□□□□□ -0.19
NPC1-201ENST00000269228 SYBUQ9NX95 663 aa13.88□□□□□ -0.19
NPC1-201ENST00000269228 DDX3YO15523 660 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms