RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 COPS7BQ9H9Q2 264 aaPredicted RBP16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 MKS1Q9NXB0 559 aa16.24■□□□□ 0.19
MAP1LC3B-201ENST00000268607 UNC80Q8N2C7 3258 aa16.23■□□□□ 0.19
MAP1LC3B-201ENST00000268607 PAPSS1O43252 624 aaPredicted RBP16.23■□□□□ 0.19
MAP1LC3B-201ENST00000268607 LCP1P13796 627 aa16.23■□□□□ 0.19
MAP1LC3B-201ENST00000268607 PRKCHP24723 683 aa16.23■□□□□ 0.19
MAP1LC3B-201ENST00000268607 CRYBB1P53674 252 aaPredicted RBP16.23■□□□□ 0.19
MAP1LC3B-201ENST00000268607 ROR1Q01973 937 aa16.23■□□□□ 0.19
MAP1LC3B-201ENST00000268607 DCAF4L1Q3SXM0 396 aa16.23■□□□□ 0.19
MAP1LC3B-201ENST00000268607 UBXN11Q5T124 520 aa16.23■□□□□ 0.19
MAP1LC3B-201ENST00000268607 SERINC5Q86VE9 423 aa16.23■□□□□ 0.19
MAP1LC3B-201ENST00000268607 DDI1Q8WTU0 396 aa16.23■□□□□ 0.19
MAP1LC3B-201ENST00000268607 KHSRPQ92945 711 aaKnown RBP eCLIP16.23■□□□□ 0.19
MAP1LC3B-201ENST00000268607 ARMC7Q9H6L4 198 aa16.23■□□□□ 0.19
MAP1LC3B-201ENST00000268607 MGEA5O60502 916 aa16.23■□□□□ 0.19
MAP1LC3B-201ENST00000268607 APOEP02649 317 aa16.23■□□□□ 0.19
MAP1LC3B-201ENST00000268607 COX4I1P13073 169 aa16.23■□□□□ 0.19
MAP1LC3B-201ENST00000268607 CPA3P15088 417 aa16.23■□□□□ 0.19
MAP1LC3B-201ENST00000268607 HOXC8P31273 242 aa16.23■□□□□ 0.19
MAP1LC3B-201ENST00000268607 ATXN3P54252 364 aaPredicted RBP16.23■□□□□ 0.19
MAP1LC3B-201ENST00000268607 SOX4Q06945 474 aaPredicted RBP16.23■□□□□ 0.19
MAP1LC3B-201ENST00000268607 CYTH1Q15438 398 aa16.23■□□□□ 0.19
MAP1LC3B-201ENST00000268607 C9orf57Q5W0N0 161 aa16.23■□□□□ 0.19
MAP1LC3B-201ENST00000268607 BEST2Q8NFU1 509 aa16.23■□□□□ 0.19
MAP1LC3B-201ENST00000268607 GLT1D1Q96MS3 346 aa16.23■□□□□ 0.19
MAP1LC3B-201ENST00000268607 KCNK16Q96T55 309 aa16.23■□□□□ 0.19
MAP1LC3B-201ENST00000268607 MAN1C1Q9NR34 630 aa16.23■□□□□ 0.19
MAP1LC3B-201ENST00000268607 IPPQ9Y573 584 aa16.23■□□□□ 0.19
MAP1LC3B-201ENST00000268607 A0A1W2PQ45 241 aaPredicted RBP16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 A0A1W2PQY0 241 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 FUOMA2VDF0 154 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 H7C0C1 242 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 MATN2O00339 956 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 NFKBIAP25963 317 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 ARRB2P32121 409 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 ATP5OP48047 213 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 ZBTB6Q15916 424 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 TAZQ16635 292 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 UNC5AQ6ZN44 842 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 CAND1Q86VP6 1230 aaKnown RBP16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 SMG8Q8ND04 991 aaKnown RBP16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 VPS50Q96JG6 964 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 RNF208Q9H0X6 261 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 KIAA1522Q9P206 1035 aaPredicted RBP16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 HESX1Q9UBX0 185 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 ARHGAP26Q9UNA1 814 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 SMIM28A0A1B0GU29 152 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 M0QZ92 97 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 CHADO15335 359 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 PAN2Q504Q3 1202 aaKnown RBP16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 N4BP2L1Q5TBK1 243 aaPredicted RBP16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 SLC35F5Q8WV83 523 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 COX4I2Q96KJ9 171 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 SORT1Q99523 831 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 STN1Q9H668 368 aaKnown RBP16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 RSAD1Q9HA92 442 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 STARD7Q9NQZ5 370 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 ZNHIT2Q9UHR6 403 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 EMCNQ9ULC0 261 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 PADI3Q9ULW8 664 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 FADS3Q9Y5Q0 445 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 TRDMT1O14717 391 aaKnown RBP16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 ZBTB14O43829 449 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 KLHL41O60662 606 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 APRTP07741 180 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 IL4RP24394 825 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 ADGRE1Q14246 886 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 ITPRIPL1Q6GPH6 555 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 SLC2A7Q6PXP3 512 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 LPCAT2Q7L5N7 544 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 LILRA2Q8N149 483 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 NETO2Q8NC67 525 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 CCT7Q99832 543 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 OSBPL6Q9BZF3 934 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 ITGB1BP2Q9UKP3 347 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 COQ6Q9Y2Z9 468 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 TSC22D4Q9Y3Q8 395 aa16.22■□□□□ 0.19
MAP1LC3B-201ENST00000268607 AIM2O14862 343 aa16.21■□□□□ 0.19
MAP1LC3B-201ENST00000268607 STAMBPO95630 424 aa16.21■□□□□ 0.19
MAP1LC3B-201ENST00000268607 SDC4P31431 198 aa16.21■□□□□ 0.19
MAP1LC3B-201ENST00000268607 TMED10P49755 219 aaKnown RBP16.21■□□□□ 0.19
MAP1LC3B-201ENST00000268607 RABGGTBP53611 331 aa16.21■□□□□ 0.19
MAP1LC3B-201ENST00000268607 SLC6A3Q01959 620 aa16.21■□□□□ 0.19
MAP1LC3B-201ENST00000268607 PKDCCQ504Y2 493 aa16.21■□□□□ 0.19
MAP1LC3B-201ENST00000268607 TAF2Q6P1X5 1199 aa16.21■□□□□ 0.19
MAP1LC3B-201ENST00000268607 AGAP3Q96P47 875 aa16.21■□□□□ 0.19
MAP1LC3B-201ENST00000268607 PAAF1Q9BRP4 392 aa16.21■□□□□ 0.19
MAP1LC3B-201ENST00000268607 PLEKHA5Q9HAU0 1116 aa16.21■□□□□ 0.19
MAP1LC3B-201ENST00000268607 RIMS3Q9UJD0 308 aa16.21■□□□□ 0.19
MAP1LC3B-201ENST00000268607 KIAA1257Q9ULG3 409 aa16.21■□□□□ 0.19
MAP1LC3B-201ENST00000268607 FAM32AQ9Y421 112 aaKnown RBP16.21■□□□□ 0.19
MAP1LC3B-201ENST00000268607 NR2E3Q9Y5X4 410 aa16.21■□□□□ 0.19
MAP1LC3B-201ENST00000268607 GNL1P36915 607 aaPredicted RBP16.21■□□□□ 0.18
MAP1LC3B-201ENST00000268607 PDAP1Q13442 181 aaKnown RBP16.21■□□□□ 0.18
MAP1LC3B-201ENST00000268607 FBXO47Q5MNV8 452 aa16.21■□□□□ 0.18
MAP1LC3B-201ENST00000268607 NT5DC4Q86YG4 428 aa16.21■□□□□ 0.18
MAP1LC3B-201ENST00000268607 C10orf107Q8IVU9 208 aa16.21■□□□□ 0.18
MAP1LC3B-201ENST00000268607 MPP5Q8N3R9 675 aa16.21■□□□□ 0.18
MAP1LC3B-201ENST00000268607 PCSK9Q8NBP7 692 aaKnown RBP16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms