RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 GNAO1P09471 354 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 ALOX5P09917 674 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 MIPP30301 263 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 PDK2Q15119 407 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 ZNF699Q32M78 642 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 ZBTB41Q5SVQ8 909 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 AGAP7PQ5VUJ5 663 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 DENND1BQ6P3S1 775 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 CAND1Q86VP6 1230 aaKnown RBP13.32□□□□□ -0.28
NUP54-201ENST00000264883 HERC6Q8IVU3 1022 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 IQCF2Q8IXL9 164 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.32□□□□□ -0.28
NUP54-201ENST00000264883 TMA16Q96EY4 203 aaKnown RBP13.32□□□□□ -0.28
NUP54-201ENST00000264883 CALN1Q9BXU9 219 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 NIFKQ9BYG3 293 aaKnown RBP13.32□□□□□ -0.28
NUP54-201ENST00000264883 CEP44Q9C0F1 390 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 EFCAB1Q9HAE3 211 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 C20orf96Q9NUD7 363 aaPredicted RBP13.32□□□□□ -0.28
NUP54-201ENST00000264883 COPG2Q9UBF2 871 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 TMA7Q9Y2S6 64 aaKnown RBP13.32□□□□□ -0.28
NUP54-201ENST00000264883 PCDHB12Q9Y5F1 795 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 H7C0C1 242 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 TPP1O14773 563 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 GMNNO75496 209 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 GCATO75600 419 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 MYO1DO94832 1006 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 CST3P01034 146 aaPredicted RBP13.32□□□□□ -0.28
NUP54-201ENST00000264883 CKMT2P17540 419 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 MYF6P23409 242 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 EPHX2P34913 555 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 GRM5P41594 1212 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 ATP5OP48047 213 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 MAPK10P53779 464 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 OAZ1P54368 228 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 ASB9Q96DX5 294 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 MCRS1Q96EZ8 462 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 ACO2Q99798 780 aaKnown RBP13.32□□□□□ -0.28
NUP54-201ENST00000264883 MRPL4Q9BYD3 311 aaKnown RBP13.32□□□□□ -0.28
NUP54-201ENST00000264883 NANOGQ9H9S0 305 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 RNF146Q9NTX7 359 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 ADA2Q9NZK5 511 aa13.32□□□□□ -0.28
NUP54-201ENST00000264883 NXF1Q9UBU9 619 aaKnown RBP13.32□□□□□ -0.28
NUP54-201ENST00000264883 MAFBQ9Y5Q3 323 aaPredicted RBP13.32□□□□□ -0.28
NUP54-201ENST00000264883 ZNF487B1APH4 448 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 SPATA31C2B4DYI2 1134 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 SOCS2O14508 198 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 OGTO15294 1046 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 MGEA5O60502 916 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 RSL1D1O76021 490 aaKnown RBP13.31□□□□□ -0.28
NUP54-201ENST00000264883 AMHP03971 560 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 TPSB2P20231 275 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 PROZP22891 400 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 ASPAP45381 313 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 HMGCS2P54868 508 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 RHDQ02161 417 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 NAB1Q13506 487 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 BAATQ14032 418 aaPredicted RBP13.31□□□□□ -0.28
NUP54-201ENST00000264883 VGLL4Q14135 290 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 PTK2BQ14289 1009 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 RFTN1Q14699 578 aaPredicted RBP13.31□□□□□ -0.28
NUP54-201ENST00000264883 TPSAB1Q15661 275 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 PERM1Q5SV97 790 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 HMBOX1Q6NT76 420 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 PPP4R4Q6NUP7 873 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 FAM117BQ6P1L5 589 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 KCTD8Q6ZWB6 473 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 MINDY2Q8NBR6 621 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 PDPRQ8NCN5 879 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 AGR3Q8TD06 166 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 TMEM143Q96AN5 459 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 MTMR12Q9C0I1 747 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 ZNF302Q9NR11 478 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 ANKMY1Q9P2S6 941 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 ADAMTS5Q9UNA0 930 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 CARD8Q9Y2G2 431 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 ST14Q9Y5Y6 855 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 C9IYK1 514 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 TNFRSF10AO00220 468 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 NEMP1O14524 444 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 TNNC2P02585 160 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 ALDOAP04075 364 aaKnown RBP13.31□□□□□ -0.28
NUP54-201ENST00000264883 ZNF143P52747 638 aaPredicted RBP13.31□□□□□ -0.28
NUP54-201ENST00000264883 GRSF1Q12849 480 aaKnown RBP eCLIP13.31□□□□□ -0.28
NUP54-201ENST00000264883 SELENBP1Q13228 472 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 NEDD8Q15843 81 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 FAM209AQ5JX71 171 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 CHSY3Q70JA7 882 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 KIAA0319LQ8IZA0 1049 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 TDRD5Q8NAT2 981 aaKnown RBP13.31□□□□□ -0.28
NUP54-201ENST00000264883 REPS2Q8NFH8 660 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 SLCO4A1Q96BD0 722 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 PPWD1Q96BP3 646 aaKnown RBP13.31□□□□□ -0.28
NUP54-201ENST00000264883 PGBD4Q96DM1 585 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 ZNF347Q96SE7 839 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 CNPY3Q9BT09 278 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 SMARCAD1Q9H4L7 1026 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 WDR55Q9H6Y2 383 aaPredicted RBP13.31□□□□□ -0.28
NUP54-201ENST00000264883 SMOXQ9NWM0 555 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 ATP11BQ9Y2G3 1177 aa13.31□□□□□ -0.28
NUP54-201ENST00000264883 A8MU76 341 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms