RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 ZNF222Q9UK12 451 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 PIAS1O75925 651 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 ATG14Q6ZNE5 492 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 NDNQ99608 321 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 RRAGCQ9HB90 399 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 APOC4-APOC2K7ER74 178 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 APOC2P02655 101 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 SPIRE1Q08AE8 756 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 NAB1Q13506 487 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 KLHL12Q53G59 568 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 FBXW8Q8N3Y1 598 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 SPACA7Q96KW9 195 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 FBXO44Q9H4M3 255 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 TRIM39Q9HCM9 518 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 MRPS7Q9Y2R9 242 aaKnown RBP18.21■□□□□ 0.51
COL5A3-201ENST00000264828 ZBTB14O43829 449 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 MAPTP10636 758 aaKnown RBP18.21■□□□□ 0.51
COL5A3-201ENST00000264828 RARRES1P49788 294 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 FAM171A1Q5VUB5 890 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 EIF3MQ7L2H7 374 aaKnown RBP18.21■□□□□ 0.51
COL5A3-201ENST00000264828 KRT74Q7RTS7 529 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 PSMA8Q8TAA3 256 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 DLG3Q92796 817 aa18.21■□□□□ 0.51
COL5A3-201ENST00000264828 CDK5RAP1Q96SZ6 601 aaKnown RBP18.21■□□□□ 0.51
COL5A3-201ENST00000264828 PPIEQ9UNP9 301 aaKnown RBP18.21■□□□□ 0.51
COL5A3-201ENST00000264828 VIL1P09327 827 aaKnown RBP18.21■□□□□ 0.5
COL5A3-201ENST00000264828 FGRP09769 529 aa18.21■□□□□ 0.5
COL5A3-201ENST00000264828 BCL2L1Q07817 233 aa18.21■□□□□ 0.5
COL5A3-201ENST00000264828 RIOX1Q9H6W3 641 aa18.21■□□□□ 0.5
COL5A3-201ENST00000264828 COL3A1P02461 1466 aaPredicted RBP18.21■□□□□ 0.5
COL5A3-201ENST00000264828 BDNFP23560 247 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 FAM187BQ17R55 369 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 WDR59Q6PJI9 974 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 IKBIPQ70UQ0 350 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 KATNAL2Q8IYT4 538 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 SPATA6LQ8N4H0 392 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 SLC35C1Q96A29 364 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 FFAR3O14843 346 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 GPR42O15529 346 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 HOXA2O43364 376 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 IGSF6O95976 241 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 ATP5BP06576 529 aaKnown RBP18.2■□□□□ 0.5
COL5A3-201ENST00000264828 SLC12A3P55017 1021 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 ITGB3BPQ13352 177 aaPredicted RBP18.2■□□□□ 0.5
COL5A3-201ENST00000264828 RETSATQ6NUM9 610 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 SERPINB11Q96P15 392 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 ABCG8Q9H221 673 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 ZDHHC6Q9H6R6 413 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 ACP6Q9NPH0 428 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 UBA2Q9UBT2 640 aaPredicted RBP18.2■□□□□ 0.5
COL5A3-201ENST00000264828 SALL1Q9NSC2 1324 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 H3BRB1 525 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 BMP10O95393 424 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 TKTP29401 623 aaKnown RBP18.2■□□□□ 0.5
COL5A3-201ENST00000264828 SFSWAPQ12872 951 aaKnown RBP18.2■□□□□ 0.5
COL5A3-201ENST00000264828 MZT2BQ6NZ67 158 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 PMF1Q6P1K2 205 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 MZT2AQ6P582 158 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 NLNQ9BYT8 704 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 TUT1Q9H6E5 874 aaKnown RBP18.2■□□□□ 0.5
COL5A3-201ENST00000264828 GBA2Q9HCG7 927 aaPredicted RBP18.2■□□□□ 0.5
COL5A3-201ENST00000264828 CDH9Q9ULB4 789 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 ENTPD4Q9Y227 616 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 ARIH1Q9Y4X5 557 aaPredicted RBP18.2■□□□□ 0.5
COL5A3-201ENST00000264828 IDH3BO43837 385 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 CCDC166P0CW27 439 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 ANPEPP15144 967 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 CHKAP35790 457 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 SCIMPQ6UWF3 145 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 GCNT7Q6ZNI0 430 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 CAMK1DQ8IU85 385 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 RRN3Q9NYV6 651 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 GSTK1Q9Y2Q3 226 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 GMPPBQ9Y5P6 360 aa18.2■□□□□ 0.5
COL5A3-201ENST00000264828 ADCY6O43306 1168 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 ENTPD5O75356 428 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 EPORP19235 508 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 CCNA2P20248 432 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 GCNT1Q02742 428 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 ACSM2AQ08AH3 577 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 ACSM2BQ68CK6 577 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 RBM44Q6ZP01 1051 aaKnown RBP18.19■□□□□ 0.5
COL5A3-201ENST00000264828 ITIH5Q86UX2 942 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 OFCC1Q8IZS5 231 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 POC5Q8NA72 575 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 VCPIP1Q96JH7 1222 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 OMDQ99983 421 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 FAM126AQ9BYI3 521 aaPredicted RBP18.19■□□□□ 0.5
COL5A3-201ENST00000264828 IKZF3Q9UKT9 509 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 AK9Q5TCS8 1911 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 LTA4HP09960 611 aaKnown RBP18.19■□□□□ 0.5
COL5A3-201ENST00000264828 GRIA4P48058 902 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 BTN2A1Q7KYR7 527 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 ALYREFQ86V81 257 aaKnown RBP18.19■□□□□ 0.5
COL5A3-201ENST00000264828 CROCCP3Q8IVE0 287 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 ZNF540Q8NDQ6 660 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 SELENOMQ8WWX9 145 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 COL26A1Q96A83 441 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 BPIFA1Q9NP55 256 aa18.19■□□□□ 0.5
COL5A3-201ENST00000264828 FBXO10Q9UK96 956 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms