RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 INTS6Q9UL03 887 aaKnown RBP12.79□□□□□ -0.36
CLNS1A-201ENST00000263309 REXO2Q9Y3B8 237 aaKnown RBP12.79□□□□□ -0.36
CLNS1A-201ENST00000263309 JRKLQ9Y4A0 524 aa12.79□□□□□ -0.36
CLNS1A-201ENST00000263309 HYOU1Q9Y4L1 999 aa12.79□□□□□ -0.36
CLNS1A-201ENST00000263309 CFAP54Q96N23 3096 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 GOLGA6CA6NDK9 693 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 GOLGA6BA6NDN3 693 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 LRRC72A6NJI9 287 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 SHISA7A6NL88 538 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 ESPNB1AK53 854 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 WASH3PC4AMC7 463 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 I6L893 689 aaPredicted RBP12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 KRIT1O00522 736 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 CST8O60676 142 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 PRAMEF11O60813 436 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 GOLGA6DP0CG33 693 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 HLA-EP13747 358 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 CHRNA3P32297 505 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 SLC8A1P32418 973 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 ACVRL1P37023 503 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 FNTBP49356 437 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 NSUN2Q08J23 767 aaKnown RBP eCLIP12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 AP1B1Q10567 949 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 TCF15Q12870 199 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 HNRNPDQ14103 355 aaKnown RBP12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 LBRQ14739 615 aaKnown RBP12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 PTPRNQ16849 979 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 LINGO4Q6UY18 593 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 PRR23BQ6ZRT6 265 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 USP30Q70CQ3 517 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 RABEPKQ7Z6M1 372 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 NT5DC3Q86UY8 548 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 OR2AP1Q8NGE2 309 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 TFB1MQ8WVM0 346 aaKnown RBP12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 RAPGEF5Q92565 580 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 HMCESQ96FZ2 354 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 LMLNQ96KR4 655 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 PPP1R2P1Q96PQ5 205 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 ACOX2Q99424 681 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 FRMD8P1Q9BZ68 369 aaPredicted RBP12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 BTBD1Q9H0C5 482 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 LRRC19Q9H756 370 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 SGK2Q9HBY8 427 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 PRSS16Q9NQE7 514 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 KLHL11Q9NVR0 708 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 GOLGA6AQ9NYA3 693 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 GMEB2Q9UKD1 530 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 OR51B4Q9Y5P0 310 aa12.78□□□□□ -0.36
CLNS1A-201ENST00000263309 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.78□□□□□ -0.363e-8■■■□□ 15.7
CLNS1A-201ENST00000263309 GRID2IPA4D2P6 1211 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 RCCD1A6NED2 376 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 HACD1B0YJ81 288 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 H7C0C1 242 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 KPNA3O00505 521 aaPredicted RBP12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 NEMP1O14524 444 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 DCLK1O15075 740 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 MATN3O15232 486 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 FOXD2O60548 495 aaPredicted RBP12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 SNAP91O60641 907 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 ADAM23O75077 832 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 SIN3BO75182 1162 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 RNASEH2AO75792 299 aaKnown RBP12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 FTCDO95954 541 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 PRKCHP24723 683 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 SERPINA4P29622 427 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 GARSP41250 739 aaKnown RBP12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 CTSOP43234 321 aaPredicted RBP12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 MMP13P45452 471 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 ATP5OP48047 213 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 STK19P49842 368 aaPredicted RBP12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 IRAK1P51617 712 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 SUOXP51687 545 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 DYNLT1P63172 113 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 MMRN1Q13201 1228 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 PRPSAP1Q14558 356 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 WDR45BQ5MNZ6 344 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 C22orf39Q6P5X5 142 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 FBXL19Q6PCT2 694 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 TSSK4Q6SA08 328 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 MMAAQ8IVH4 418 aaKnown RBP12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 CCDC13Q8IYE1 715 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 PCDH19Q8TAB3 1148 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 HCAR2Q8TDS4 363 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 GAB3Q8WWW8 586 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 TSC1Q92574 1164 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 ALG14Q96F25 216 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 VAT1Q99536 393 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 MAGEB5Q9BZ81 275 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 OSBPL8Q9BZF1 889 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 RSPH9Q9H1X1 276 aaPredicted RBP12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 ATP13A3Q9H7F0 1226 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 SCUBE2Q9NQ36 999 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 ITM2CQ9NQX7 267 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 FBXL12Q9NXK8 326 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 TFR2Q9UP52 801 aa12.77□□□□□ -0.37
CLNS1A-201ENST00000263309 MYO15AQ9UKN7 3530 aa12.76□□□□□ -0.37
CLNS1A-201ENST00000263309 A0A1W2PQF6 199 aa12.76□□□□□ -0.37
CLNS1A-201ENST00000263309 SLC7A4O43246 635 aa12.76□□□□□ -0.37
CLNS1A-201ENST00000263309 TUBB4AP04350 444 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms