RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 AP5B1Q2VPB7 878 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 DACT2Q5SW24 774 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 SCIMPQ6UWF3 145 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 ZNF605Q86T29 641 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 SAPCD2Q86UD0 394 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 RGL4Q8IZJ4 473 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 DGCR6LQ9BY27 220 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 UGT2B28Q9BY64 529 aa12.26□□□□□ -0.45
COL8A1-201ENST00000261037 RPN2P04844 631 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 ALOX12P18054 663 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 EPORP19235 508 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 DGKAP23743 735 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 MRPS22P82650 360 aaKnown RBP12.25□□□□□ -0.45
COL8A1-201ENST00000261037 LRRC74BQ6ZQY2 392 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 C16orf62Q7Z3J2 963 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 ZC3H7AQ8IWR0 971 aaKnown RBP12.25□□□□□ -0.45
COL8A1-201ENST00000261037 CYP4X1Q8N118 509 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 FLCNQ8NFG4 579 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 ATXN2LQ8WWM7 1075 aaKnown RBP12.25□□□□□ -0.45
COL8A1-201ENST00000261037 VCPIP1Q96JH7 1222 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 APOL4Q9BPW4 351 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 VPS51Q9UID3 782 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 VPS4BO75351 444 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 BMP10O95393 424 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 BCL10O95999 233 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 PIRTP0C851 137 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 CTPS1P17812 591 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 EIF4BP23588 611 aaKnown RBP12.25□□□□□ -0.45
COL8A1-201ENST00000261037 RPL14P50914 215 aaKnown RBP12.25□□□□□ -0.45
COL8A1-201ENST00000261037 RRP1BQ14684 758 aaKnown RBP12.25□□□□□ -0.45
COL8A1-201ENST00000261037 SLC45A4Q5BKX6 768 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 IRAK1BP1Q5VVH5 260 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 RAET1GQ6H3X3 334 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 DSG4Q86SJ6 1040 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 PSTKQ8IV42 348 aaKnown RBP12.25□□□□□ -0.45
COL8A1-201ENST00000261037 ASB8Q9H765 288 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 A0A0B4J269 797 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 FAM237BA0A1B0GVD1 139 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 NTRK1P04629 796 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 SLURP2P0DP57 97 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 ALADP13716 330 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 HNF4AP41235 474 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 TUFMP49411 452 aaKnown RBP12.25□□□□□ -0.45
COL8A1-201ENST00000261037 IL2P60568 153 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 GRIK5Q16478 980 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 FOXR1Q6PIV2 292 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 ACTRT2Q8TDY3 377 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 UBASH3BQ8TF42 649 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 AENQ8WTP8 325 aaKnown RBP12.25□□□□□ -0.45
COL8A1-201ENST00000261037 WNT8BQ93098 351 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 SLC4A5Q9BY07 1137 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 CYP1A1P04798 512 aaPredicted RBP12.25□□□□□ -0.45
COL8A1-201ENST00000261037 IFNA16P05015 189 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 CCDC166P0CW27 439 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 MYL12AP19105 171 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 ATP5C1P36542 298 aaKnown RBP12.25□□□□□ -0.45
COL8A1-201ENST00000261037 WASHC2DQ5SRD0 308 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 KIAA1324Q6UXG2 1013 aaKnown RBP12.25□□□□□ -0.45
COL8A1-201ENST00000261037 GPC2Q8N158 579 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 LNX1Q8TBB1 728 aaPredicted RBP12.25□□□□□ -0.45
COL8A1-201ENST00000261037 ETNPPLQ8TBG4 499 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 PWWP2AQ96N64 755 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 SIK3Q9Y2K2 1263 aa12.25□□□□□ -0.45
COL8A1-201ENST00000261037 PEX11AO75192 247 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 IKBKEQ14164 716 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 TAF5Q15542 800 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 SH3BP5LQ7L8J4 393 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 FAM20CQ8IXL6 584 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 IZUMO1Q8IYV9 350 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 TMEM86AQ8N2M4 240 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 SVOPQ8N4V2 548 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 EXOC2Q96KP1 924 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 WDR18Q9BV38 432 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 PCDH12Q9NPG4 1184 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 FAM198AQ9UFP1 575 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 STARD13Q9Y3M8 1113 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 SMIM31A0A1B0GVY4 71 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 ME2P23368 584 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 CDC25CP30307 473 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 NTSP30990 170 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 MAXP61244 160 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 TTMPQ5BVD1 217 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 NOL9Q5SY16 702 aaKnown RBP12.24□□□□□ -0.45
COL8A1-201ENST00000261037 KLHL17Q6TDP4 642 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 SELENOMQ8WWX9 145 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 C19orf60Q96EN9 201 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 BCL2L14Q9BZR8 327 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 ZNF624Q9P2J8 865 aaPredicted RBP12.24□□□□□ -0.45
COL8A1-201ENST00000261037 ARHGAP28Q9P2N2 729 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 ASTN1O14525 1302 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 TRAV19A0A0A6YYK7 116 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 LTA4HP09960 611 aaKnown RBP12.24□□□□□ -0.45
COL8A1-201ENST00000261037 MRPS6P82932 125 aaKnown RBP12.24□□□□□ -0.45
COL8A1-201ENST00000261037 ACSM2AQ08AH3 577 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 KRR1Q13601 381 aaKnown RBP12.24□□□□□ -0.45
COL8A1-201ENST00000261037 PCID2Q5JVF3 399 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 ACSM2BQ68CK6 577 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 C1orf186Q6ZWK4 172 aa12.24□□□□□ -0.45
COL8A1-201ENST00000261037 PTGR2Q8N8N7 351 aaPredicted RBP12.24□□□□□ -0.45
COL8A1-201ENST00000261037 GPR156Q8NFN8 814 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms