RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 RPL10LQ96L21 214 aaKnown RBP21.1■□□□□ 0.97
RTCA-201ENST00000260563 LRRC1Q9BTT6 524 aa21.1■□□□□ 0.97
RTCA-201ENST00000260563 SP110Q9HB58 689 aa21.1■□□□□ 0.97
RTCA-201ENST00000260563 FEZ2Q9UHY8 353 aaPredicted RBP21.1■□□□□ 0.97
RTCA-201ENST00000260563 HCN2Q9UL51 889 aa21.1■□□□□ 0.97
RTCA-201ENST00000260563 ZNF148Q9UQR1 794 aa21.1■□□□□ 0.97
RTCA-201ENST00000260563 ZSCAN5CA6NGD5 496 aaPredicted RBP21.09■□□□□ 0.97
RTCA-201ENST00000260563 H7C0C1 242 aa21.09■□□□□ 0.97
RTCA-201ENST00000260563 RAD51CO43502 376 aa21.09■□□□□ 0.97
RTCA-201ENST00000260563 CHRM1P11229 460 aaPredicted RBP21.09■□□□□ 0.97
RTCA-201ENST00000260563 NNMTP40261 264 aa21.09■□□□□ 0.97
RTCA-201ENST00000260563 ATP5OP48047 213 aa21.09■□□□□ 0.97
RTCA-201ENST00000260563 STK19P49842 368 aaPredicted RBP21.09■□□□□ 0.97
RTCA-201ENST00000260563 CLCN5P51795 746 aa21.09■□□□□ 0.97
RTCA-201ENST00000260563 GEMIN4P57678 1058 aaKnown RBP21.09■□□□□ 0.97
RTCA-201ENST00000260563 LMNB2Q03252 620 aa21.09■□□□□ 0.97
RTCA-201ENST00000260563 PDK1Q15118 436 aa21.09■□□□□ 0.97
RTCA-201ENST00000260563 HSF5Q4G112 596 aaPredicted RBP21.09■□□□□ 0.97
RTCA-201ENST00000260563 DARS2Q6PI48 645 aaKnown RBP21.09■□□□□ 0.97
RTCA-201ENST00000260563 SERPINA13PQ6UXR4 307 aa21.09■□□□□ 0.97
RTCA-201ENST00000260563 BMP8AQ7Z5Y6 402 aa21.09■□□□□ 0.97
RTCA-201ENST00000260563 ALLCQ8N6M5 410 aa21.09■□□□□ 0.97
RTCA-201ENST00000260563 IL17RCQ8NAC3 791 aa21.09■□□□□ 0.97
RTCA-201ENST00000260563 SLCO2A1Q92959 643 aa21.09■□□□□ 0.97
RTCA-201ENST00000260563 CHRDQ9H2X0 955 aa21.09■□□□□ 0.97
RTCA-201ENST00000260563 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.09■□□□□ 0.97
RTCA-201ENST00000260563 V9GYY5 206 aaPredicted RBP21.09■□□□□ 0.97
RTCA-201ENST00000260563 CXorf51AA0A1B0GTR3 108 aa21.09■□□□□ 0.97
RTCA-201ENST00000260563 HACD1B0YJ81 288 aa21.09■□□□□ 0.97
RTCA-201ENST00000260563 PPP1R12AO14974 1030 aaPredicted RBP21.09■□□□□ 0.97
RTCA-201ENST00000260563 ZMPSTE24O75844 475 aa21.09■□□□□ 0.97
RTCA-201ENST00000260563 KLF8O95600 359 aaPredicted RBP21.09■□□□□ 0.97
RTCA-201ENST00000260563 ECEL1O95672 775 aa21.09■□□□□ 0.97
RTCA-201ENST00000260563 MX2P20592 715 aa21.09■□□□□ 0.97
RTCA-201ENST00000260563 IL12RB1P42701 662 aa21.09■□□□□ 0.97
RTCA-201ENST00000260563 PTGIRP43119 386 aa21.09■□□□□ 0.97
RTCA-201ENST00000260563 MRPS25P82663 173 aaKnown RBP21.09■□□□□ 0.97
RTCA-201ENST00000260563 GALNT2Q10471 571 aa21.09■□□□□ 0.97
RTCA-201ENST00000260563 SDE2Q6IQ49 451 aa21.09■□□□□ 0.97
RTCA-201ENST00000260563 LINGO4Q6UY18 593 aa21.09■□□□□ 0.97
RTCA-201ENST00000260563 CDKL3Q8IVW4 592 aaPredicted RBP21.09■□□□□ 0.97
RTCA-201ENST00000260563 TFB1MQ8WVM0 346 aaKnown RBP21.09■□□□□ 0.97
RTCA-201ENST00000260563 MRGPRX3Q96LB0 322 aa21.09■□□□□ 0.97
RTCA-201ENST00000260563 TMEM121Q9BTD3 319 aa21.09■□□□□ 0.97
RTCA-201ENST00000260563 IER2Q9BTL4 223 aa21.09■□□□□ 0.97
RTCA-201ENST00000260563 CACNA2D2Q9NY47 1150 aa21.09■□□□□ 0.97
RTCA-201ENST00000260563 HS3ST2Q9Y278 367 aa21.09■□□□□ 0.97
RTCA-201ENST00000260563 FAM86C2PA6NEL3 165 aa21.08■□□□□ 0.96
RTCA-201ENST00000260563 TTI1O43156 1089 aa21.08■□□□□ 0.96
RTCA-201ENST00000260563 PI15O43692 258 aa21.08■□□□□ 0.96
RTCA-201ENST00000260563 ATG13O75143 517 aa21.08■□□□□ 0.96
RTCA-201ENST00000260563 RHOXF2BP0C7M4 288 aa21.08■□□□□ 0.96
RTCA-201ENST00000260563 NTSR1P30989 418 aa21.08■□□□□ 0.96
RTCA-201ENST00000260563 GARSP41250 739 aaKnown RBP21.08■□□□□ 0.96
RTCA-201ENST00000260563 SERPINH1P50454 418 aaKnown RBP21.08■□□□□ 0.96
RTCA-201ENST00000260563 SLC45A4Q5BKX6 768 aa21.08■□□□□ 0.96
RTCA-201ENST00000260563 ARHGAP36Q6ZRI8 547 aa21.08■□□□□ 0.96
RTCA-201ENST00000260563 B4GALNT4Q76KP1 1039 aa21.08■□□□□ 0.96
RTCA-201ENST00000260563 LRRC49Q8IUZ0 686 aa21.08■□□□□ 0.96
RTCA-201ENST00000260563 FBXL6Q8N531 539 aa21.08■□□□□ 0.96
RTCA-201ENST00000260563 SH2D3CQ8N5H7 860 aa21.08■□□□□ 0.96
RTCA-201ENST00000260563 ATP11CQ8NB49 1132 aa21.08■□□□□ 0.96
RTCA-201ENST00000260563 KDM1BQ8NB78 822 aa21.08■□□□□ 0.96
RTCA-201ENST00000260563 TXNDC5Q8NBS9 432 aaKnown RBP21.08■□□□□ 0.96
RTCA-201ENST00000260563 MYO19Q96H55 970 aa21.08■□□□□ 0.96
RTCA-201ENST00000260563 QKIQ96PU8 341 aaKnown RBP eCLIP21.08■□□□□ 0.96
RTCA-201ENST00000260563 ACOX2Q99424 681 aa21.08■□□□□ 0.96
RTCA-201ENST00000260563 RHOXF2Q9BQY4 288 aa21.08■□□□□ 0.96
RTCA-201ENST00000260563 C10orf88Q9H8K7 445 aa21.08■□□□□ 0.96
RTCA-201ENST00000260563 IPO11Q9UI26 975 aaKnown RBP21.08■□□□□ 0.96
RTCA-201ENST00000260563 SLC8A2Q9UPR5 921 aa21.08■□□□□ 0.96
RTCA-201ENST00000260563 BCLAF3A2AJT9 711 aaKnown RBP21.07■□□□□ 0.96
RTCA-201ENST00000260563 CHURC1-FNTBB4DL54 471 aa21.07■□□□□ 0.96
RTCA-201ENST00000260563 PRAMEF11O60813 436 aa21.07■□□□□ 0.96
RTCA-201ENST00000260563 GAS8O95995 478 aa21.07■□□□□ 0.96
RTCA-201ENST00000260563 VASPP50552 380 aaPredicted RBP21.07■□□□□ 0.96
RTCA-201ENST00000260563 CLCN6P51797 869 aa21.07■□□□□ 0.96
RTCA-201ENST00000260563 IL10RBQ08334 325 aa21.07■□□□□ 0.96
RTCA-201ENST00000260563 ERCC6LQ2NKX8 1250 aa21.07■□□□□ 0.96
RTCA-201ENST00000260563 EOGTQ5NDL2 527 aa21.07■□□□□ 0.96
RTCA-201ENST00000260563 PKN3Q6P5Z2 889 aa21.07■□□□□ 0.96
RTCA-201ENST00000260563 GSTA5Q7RTV2 222 aa21.07■□□□□ 0.96
RTCA-201ENST00000260563 JAMLQ86YT9 394 aa21.07■□□□□ 0.96
RTCA-201ENST00000260563 LRRN4Q8WUT4 740 aa21.07■□□□□ 0.96
RTCA-201ENST00000260563 HDAC11Q96DB2 347 aa21.07■□□□□ 0.96
RTCA-201ENST00000260563 LGMNQ99538 433 aa21.07■□□□□ 0.96
RTCA-201ENST00000260563 BRD8Q9H0E9 1235 aa21.07■□□□□ 0.96
RTCA-201ENST00000260563 PDFQ9HBH1 243 aa21.07■□□□□ 0.96
RTCA-201ENST00000260563 DLGAP2Q9P1A6 1054 aa21.07■□□□□ 0.96
RTCA-201ENST00000260563 UBA2Q9UBT2 640 aaPredicted RBP21.07■□□□□ 0.96
RTCA-201ENST00000260563 MMP17Q9ULZ9 603 aa21.07■□□□□ 0.96
RTCA-201ENST00000260563 STON1Q9Y6Q2 735 aa21.07■□□□□ 0.96
RTCA-201ENST00000260563 CFAP69A5D8W1 941 aa21.06■□□□□ 0.96
RTCA-201ENST00000260563 FAM187AA6NFU0 413 aa21.06■□□□□ 0.96
RTCA-201ENST00000260563 J3KR12 359 aa21.06■□□□□ 0.96
RTCA-201ENST00000260563 SGK1O00141 431 aa21.06■□□□□ 0.96
RTCA-201ENST00000260563 SRCP12931 536 aa21.06■□□□□ 0.96
RTCA-201ENST00000260563 RBL1P28749 1068 aa21.06■□□□□ 0.96
RTCA-201ENST00000260563 WASP42768 502 aa21.06■□□□□ 0.96
RTCA-201ENST00000260563 SLC20A2Q08357 652 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms