RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 PMLP29590 882 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 NPY2RP49146 381 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 WDR4P57081 412 aaKnown RBP8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 ACCSLQ4AC99 568 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 ANKRD20A4Q4UJ75 823 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 SPANXN3Q5MJ09 141 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 BEND5Q7L4P6 421 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 PTAR1Q7Z6K3 402 aaPredicted RBP8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 SCML4Q8N228 414 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 KLHL23Q8NBE8 558 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 DPF3Q92784 378 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 CENPTQ96BT3 561 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 APOPT1Q96IL0 206 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 RILPQ96NA2 401 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 MLPHQ9BV36 600 aaPredicted RBP8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 POLR1EQ9GZS1 481 aaKnown RBP8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 CERS4Q9HA82 394 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 USP15Q9Y4E8 981 aaPredicted RBP8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 INSL5Q9Y5Q6 135 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 CPQQ9Y646 472 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 A0A1W2PRU2 124 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 AP3B1O00203 1094 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 DRD4P21917 467 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 NMBRP28336 390 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 RFC2P35250 354 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 GP5P40197 560 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 GLRBP48167 497 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 CTBP1Q13363 440 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 TPGS2Q68CL5 300 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 PACS1Q6VY07 963 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 ZNF534Q76KX8 674 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 SPATS2Q86XZ4 545 aaKnown RBP8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 ARHGAP12Q8IWW6 846 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 AGGF1Q8N302 714 aaeCLIP8.84□□□□□ -0.999e-6■■□□□ 11.6
CALCOCO2-201ENST00000258947 AGR3Q8TD06 166 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 SPATA17Q96L03 361 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 MECRQ9BV79 373 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 PHACTR1Q9C0D0 580 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 MANSC1Q9H8J5 431 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 CAB39LQ9H9S4 337 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 EIF2B3Q9NR50 452 aaKnown RBP8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 CPSF2Q9P2I0 782 aaKnown RBP8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 UBA2Q9UBT2 640 aaPredicted RBP8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 HBS1LQ9Y450 684 aaKnown RBP8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 BACE2Q9Y5Z0 518 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 PSAT1Q9Y617 370 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 TOP3BO95985 862 aaKnown RBP8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 C1RP00736 705 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 SERPINF2P08697 491 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 FPGSQ05932 587 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 GALNT3Q14435 633 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 LBRQ14739 615 aaKnown RBP8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 PABPC1LQ4VXU2 614 aaKnown RBP8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 PPM1LQ5SGD2 360 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 RNF219Q5W0B1 726 aaPredicted RBP8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 ZNF470Q6ECI4 717 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 MSANTD2Q6P1R3 559 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 ZCCHC23Q6ZST2 131 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 HERC6Q8IVU3 1022 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 TSSK1BQ9BXA7 367 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 MTIF3Q9H2K0 278 aaKnown RBP8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 SHROOM3Q8TF72 1996 aa8.84□□□□□ -0.99
CALCOCO2-201ENST00000258947 ITGA2BP08514 1039 aa8.83□□□□□ -1
CALCOCO2-201ENST00000258947 SP100P23497 879 aaPredicted RBP8.83□□□□□ -1
CALCOCO2-201ENST00000258947 WEE1P30291 646 aa8.83□□□□□ -1
CALCOCO2-201ENST00000258947 HTR7P34969 479 aa8.83□□□□□ -1
CALCOCO2-201ENST00000258947 DSG1Q02413 1049 aa8.83□□□□□ -1
CALCOCO2-201ENST00000258947 GNA12Q03113 381 aa8.83□□□□□ -1
CALCOCO2-201ENST00000258947 HNRNPDQ14103 355 aaKnown RBP8.83□□□□□ -1
CALCOCO2-201ENST00000258947 CHI3L2Q15782 390 aa8.83□□□□□ -1
CALCOCO2-201ENST00000258947 TAF1BQ53T94 588 aaPredicted RBP8.83□□□□□ -1
CALCOCO2-201ENST00000258947 CFAP157Q5JU67 520 aa8.83□□□□□ -1
CALCOCO2-201ENST00000258947 ZSCAN18Q8TBC5 510 aaPredicted RBP8.83□□□□□ -1
CALCOCO2-201ENST00000258947 MTBPQ96DY7 904 aa8.83□□□□□ -1
CALCOCO2-201ENST00000258947 C1orf74Q96LT6 269 aa8.83□□□□□ -1
CALCOCO2-201ENST00000258947 ZNF778Q96MU6 729 aa8.83□□□□□ -1
CALCOCO2-201ENST00000258947 EMILIN2Q9BXX0 1053 aa8.83□□□□□ -1
CALCOCO2-201ENST00000258947 TM6SF2Q9BZW4 377 aa8.83□□□□□ -1
CALCOCO2-201ENST00000258947 SMG9Q9H0W8 520 aaKnown RBP8.83□□□□□ -1
CALCOCO2-201ENST00000258947 ACTL7AQ9Y615 435 aa8.83□□□□□ -1
CALCOCO2-201ENST00000258947 LAMA2P24043 3122 aaKnown RBP8.83□□□□□ -1
CALCOCO2-201ENST00000258947 UBA6A0AVT1 1052 aaPredicted RBP8.83□□□□□ -1
CALCOCO2-201ENST00000258947 MAGEB16A2A368 324 aa8.83□□□□□ -1
CALCOCO2-201ENST00000258947 PHGDHO43175 533 aaKnown RBP8.83□□□□□ -1
CALCOCO2-201ENST00000258947 GLUD1P00367 558 aa8.83□□□□□ -1
CALCOCO2-201ENST00000258947 IGLV3-25P01717 112 aa8.83□□□□□ -1
CALCOCO2-201ENST00000258947 GSTA2P09210 222 aa8.83□□□□□ -1
CALCOCO2-201ENST00000258947 CNPP09543 421 aaKnown RBP8.83□□□□□ -1
CALCOCO2-201ENST00000258947 EN2P19622 333 aaPredicted RBP8.83□□□□□ -1
CALCOCO2-201ENST00000258947 SERPINB4P48594 390 aa8.83□□□□□ -1
CALCOCO2-201ENST00000258947 NDST2P52849 883 aa8.83□□□□□ -1
CALCOCO2-201ENST00000258947 PPIGQ13427 754 aaKnown RBP eCLIP8.83□□□□□ -1
CALCOCO2-201ENST00000258947 PPM1JQ5JR12 505 aa8.83□□□□□ -1
CALCOCO2-201ENST00000258947 PCID2Q5JVF3 399 aa8.83□□□□□ -1
CALCOCO2-201ENST00000258947 ESRP1Q6NXG1 681 aaKnown RBP8.83□□□□□ -1
CALCOCO2-201ENST00000258947 BNIPLQ7Z465 357 aa8.83□□□□□ -1
CALCOCO2-201ENST00000258947 SRLQ86TD4 932 aa8.83□□□□□ -1
CALCOCO2-201ENST00000258947 MFN1Q8IWA4 741 aa8.83□□□□□ -1
CALCOCO2-201ENST00000258947 OR6K2Q8NGY2 324 aa8.83□□□□□ -1
CALCOCO2-201ENST00000258947 EXT2Q93063 718 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms