RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 LRRC14BA6NHZ5 514 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 IQCF5A8MTL0 148 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 USP1O94782 785 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 ZFXP17010 805 aaPredicted RBP9.24□□□□□ -0.93
CKAP2-201ENST00000258607 WNT3AP56704 352 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 GRIK3Q13003 919 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 RASA2Q15283 850 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 PDK4Q16654 411 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 TEX44Q53QW1 395 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 PIK3R6Q5UE93 754 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 TAS2R42Q7RTR8 314 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 EIF1ADQ8N9N8 165 aaKnown RBP9.24□□□□□ -0.93
CKAP2-201ENST00000258607 TMEM174Q8WUU8 243 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 BCL7CQ8WUZ0 217 aaPredicted RBP9.24□□□□□ -0.93
CKAP2-201ENST00000258607 NSMCE1Q8WV22 266 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 TBATAQ96M53 351 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 SMG5Q9UPR3 1016 aaKnown RBP9.24□□□□□ -0.93
CKAP2-201ENST00000258607 PCDHB5Q9Y5E4 795 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 HMX2A2RU54 273 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 K7ERQ8 282 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 TYROBPO43914 113 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 C2P06681 752 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 CSF2RAP15509 400 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 MPSTP25325 297 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 SERPINB6P35237 376 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 ELF3P78545 371 aaPredicted RBP9.24□□□□□ -0.93
CKAP2-201ENST00000258607 BTG3Q14201 252 aaPredicted RBP9.24□□□□□ -0.93
CKAP2-201ENST00000258607 POLD3Q15054 466 aaPredicted RBP9.24□□□□□ -0.93
CKAP2-201ENST00000258607 ANKRD20A4Q4UJ75 823 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 CROCCP2Q86T23 111 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 PSTKQ8IV42 348 aaKnown RBP9.24□□□□□ -0.93
CKAP2-201ENST00000258607 NUP93Q8N1F7 819 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 TTC39CQ8N584 583 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 ARL14EPQ8N8R7 260 aaPredicted RBP9.24□□□□□ -0.93
CKAP2-201ENST00000258607 LPCAT1Q8NF37 534 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 NXNL1Q96CM4 212 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 TMEM169Q96HH4 297 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 VPS39Q96JC1 886 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 TNKS2Q9H2K2 1166 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 TMEM39AQ9NV64 488 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 USH1CQ9Y6N9 552 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 FRYLO94915 3013 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 BCLAF3A2AJT9 711 aaKnown RBP9.24□□□□□ -0.93
CKAP2-201ENST00000258607 KRT87PA6NCN2 255 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 TXNDC9O14530 226 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 PER2O15055 1255 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 RFPL1O75677 317 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 MBL2P11226 248 aaPredicted RBP9.24□□□□□ -0.93
CKAP2-201ENST00000258607 MYL4P12829 197 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 DEFB103AP81534 67 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 MARC1Q5VT66 337 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 ING5Q8WYH8 240 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 CATSPER2Q96P56 530 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 NUDCD1Q96RS6 583 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 YME1L1Q96TA2 773 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 TBC1D10AQ9BXI6 508 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 CDH22Q9UJ99 828 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 DSEQ9UL01 958 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 PTGDR2Q9Y5Y4 395 aa9.24□□□□□ -0.93
CKAP2-201ENST00000258607 GABRDO14764 452 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 SCAMP1O15126 338 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 IRAK2O43187 625 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 NQO1P15559 274 aaKnown RBP9.23□□□□□ -0.93
CKAP2-201ENST00000258607 PIK3CGP48736 1102 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 CDKN1CP49918 316 aaPredicted RBP9.23□□□□□ -0.93
CKAP2-201ENST00000258607 CUL3Q13618 768 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 TMC7Q7Z402 723 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 PIGWQ7Z7B1 504 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 TMA16Q96EY4 203 aaKnown RBP9.23□□□□□ -0.93
CKAP2-201ENST00000258607 TLE6Q9H808 572 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 XAB2Q9HCS7 855 aaKnown RBP9.23□□□□□ -0.93
CKAP2-201ENST00000258607 SLC24A2Q9UI40 661 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 ARHGAP10A1A4S6 786 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 A6NNZ2 444 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 H0Y626 953 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 ENPP3O14638 875 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 TRIM24O15164 1050 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 RAMP2O60895 175 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 ENO3P13929 434 aaPredicted RBP9.23□□□□□ -0.93
CKAP2-201ENST00000258607 SGSHP51688 502 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 ARSDP51689 593 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 PKNOX1P55347 436 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 TUBB8Q3ZCM7 444 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 RALGPS1Q5JS13 557 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 C6orf89Q6UWU4 347 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 ZNF781Q8N8C0 355 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 ANKLE1Q8NAG6 615 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 ARNTL2Q8WYA1 636 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 ACBD6Q9BR61 282 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 ALG9Q9H6U8 611 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 ARHGEF38Q9NXL2 777 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 XPR1Q9UBH6 696 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 FCF1Q9Y324 198 aaKnown RBP9.23□□□□□ -0.93
CKAP2-201ENST00000258607 OPHN1O60890 802 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 ZWINTO95229 277 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 RALBP11234 206 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 HOXD10P28358 340 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 ACAP1Q15027 740 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 SGO1Q5FBB7 561 aa9.23□□□□□ -0.93
CKAP2-201ENST00000258607 PPM1LQ5SGD2 360 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms