RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 CLIP3Q96DZ5 547 aa20.75■□□□□ 0.91
RARA-201ENST00000254066 NSMCE3Q96MG7 304 aa20.75■□□□□ 0.91
RARA-201ENST00000254066 UPF3AQ9H1J1 476 aaKnown RBP20.75■□□□□ 0.91
RARA-201ENST00000254066 NXF1Q9UBU9 619 aaKnown RBP20.75■□□□□ 0.91
RARA-201ENST00000254066 ADAMTSL1Q8N6G6 1762 aa20.75■□□□□ 0.91
RARA-201ENST00000254066 AMHP03971 560 aa20.75■□□□□ 0.91
RARA-201ENST00000254066 HSPA8P11142 646 aaKnown RBP20.75■□□□□ 0.91
RARA-201ENST00000254066 TFEBP19484 476 aa20.75■□□□□ 0.91
RARA-201ENST00000254066 TCF7P36402 384 aaPredicted RBP20.75■□□□□ 0.91
RARA-201ENST00000254066 IREB2P48200 963 aaKnown RBP20.75■□□□□ 0.91
RARA-201ENST00000254066 FSTL1Q12841 308 aa20.75■□□□□ 0.91
RARA-201ENST00000254066 TRAF2Q12933 501 aa20.75■□□□□ 0.91
RARA-201ENST00000254066 ZNF846Q147U1 533 aa20.75■□□□□ 0.91
RARA-201ENST00000254066 BOLA3Q53S33 107 aa20.75■□□□□ 0.91
RARA-201ENST00000254066 AGAP7PQ5VUJ5 663 aa20.75■□□□□ 0.91
RARA-201ENST00000254066 LRRC49Q8IUZ0 686 aa20.75■□□□□ 0.91
RARA-201ENST00000254066 ANKRD13AQ8IZ07 590 aa20.75■□□□□ 0.91
RARA-201ENST00000254066 GOLM1Q8NBJ4 401 aa20.75■□□□□ 0.91
RARA-201ENST00000254066 OR13F1Q8NGS4 319 aa20.75■□□□□ 0.91
RARA-201ENST00000254066 USP33Q8TEY7 942 aa20.75■□□□□ 0.91
RARA-201ENST00000254066 SEPT8Q92599 483 aa20.75■□□□□ 0.91
RARA-201ENST00000254066 FEM1CQ96JP0 617 aa20.75■□□□□ 0.91
RARA-201ENST00000254066 NPAS2Q99743 824 aa20.75■□□□□ 0.91
RARA-201ENST00000254066 PARVBQ9HBI1 364 aa20.75■□□□□ 0.91
RARA-201ENST00000254066 CD300AQ9UGN4 299 aa20.75■□□□□ 0.91
RARA-201ENST00000254066 TMX2Q9Y320 296 aa20.75■□□□□ 0.91
RARA-201ENST00000254066 FAM47E-STBD1D6RA91 191 aa20.74■□□□□ 0.91
RARA-201ENST00000254066 DLGAP1O14490 977 aa20.74■□□□□ 0.91
RARA-201ENST00000254066 NEMP1O14524 444 aa20.74■□□□□ 0.91
RARA-201ENST00000254066 SPRP35270 261 aaPredicted RBP20.74■□□□□ 0.91
RARA-201ENST00000254066 TCP10Q12799 353 aa20.74■□□□□ 0.91
RARA-201ENST00000254066 WDR49Q8IV35 697 aa20.74■□□□□ 0.91
RARA-201ENST00000254066 CPNE9Q8IYJ1 553 aa20.74■□□□□ 0.91
RARA-201ENST00000254066 PQLC3Q8N755 202 aa20.74■□□□□ 0.91
RARA-201ENST00000254066 RAB2BQ8WUD1 216 aa20.74■□□□□ 0.91
RARA-201ENST00000254066 PTCD2Q8WV60 388 aaKnown RBP20.74■□□□□ 0.91
RARA-201ENST00000254066 PPWD1Q96BP3 646 aaKnown RBP20.74■□□□□ 0.91
RARA-201ENST00000254066 CYTH4Q9UIA0 394 aa20.74■□□□□ 0.91
RARA-201ENST00000254066 DAPK2Q9UIK4 370 aa20.74■□□□□ 0.91
RARA-201ENST00000254066 TCAF1Q9Y4C2 921 aa20.74■□□□□ 0.91
RARA-201ENST00000254066 SNX9Q9Y5X1 595 aa20.74■□□□□ 0.91
RARA-201ENST00000254066 COPG1Q9Y678 874 aaKnown RBP20.74■□□□□ 0.91
RARA-201ENST00000254066 PRPSAP2O60256 369 aa20.74■□□□□ 0.91
RARA-201ENST00000254066 IL4RP24394 825 aa20.74■□□□□ 0.91
RARA-201ENST00000254066 MPSTP25325 297 aa20.74■□□□□ 0.91
RARA-201ENST00000254066 PCYT1AP49585 367 aa20.74■□□□□ 0.91
RARA-201ENST00000254066 CCT8P50990 548 aa20.74■□□□□ 0.91
RARA-201ENST00000254066 MRPS9P82933 396 aaKnown RBP20.74■□□□□ 0.91
RARA-201ENST00000254066 KCTD8Q6ZWB6 473 aa20.74■□□□□ 0.91
RARA-201ENST00000254066 TTC30BQ8N4P2 665 aa20.74■□□□□ 0.91
RARA-201ENST00000254066 FAM156AQ8NDB6 213 aa20.74■□□□□ 0.91
RARA-201ENST00000254066 IL31RAQ8NI17 732 aa20.74■□□□□ 0.91
RARA-201ENST00000254066 PGBD4Q96DM1 585 aa20.74■□□□□ 0.91
RARA-201ENST00000254066 ALPK1Q96QP1 1244 aa20.74■□□□□ 0.91
RARA-201ENST00000254066 CPXM1Q96SM3 734 aa20.74■□□□□ 0.91
RARA-201ENST00000254066 C9orf16Q9BUW7 83 aa20.74■□□□□ 0.91
RARA-201ENST00000254066 EIF2B3Q9NR50 452 aaKnown RBP20.74■□□□□ 0.91
RARA-201ENST00000254066 ERVK-11Q9UQG0 969 aa20.74■□□□□ 0.91
RARA-201ENST00000254066 PSME4Q14997 1843 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 ZNF839A8K0R7 811 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 PIK3R2O00459 728 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 HMGCRP04035 888 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 CKMT2P17540 419 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 HOXD10P28358 340 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 SAMD4BQ5PRF9 694 aaKnown RBP20.73■□□□□ 0.91
RARA-201ENST00000254066 LIPMQ5VYY2 423 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 GALNT18Q6P9A2 607 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 HACE1Q8IYU2 909 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 TNS4Q8IZW8 715 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 MSTO1Q9BUK6 570 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 DNAI2Q9GZS0 605 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 NMRAL1Q9HBL8 299 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 SPAG4Q9NPE6 437 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 PSME2Q9UL46 239 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 PSAT1Q9Y617 370 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 LRRC37AA6NMS7 1700 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 E7ENX8 843 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 CCNE2O96020 404 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 CST3P01034 146 aaPredicted RBP20.73■□□□□ 0.91
RARA-201ENST00000254066 ZNF182P17025 639 aaPredicted RBP20.73■□□□□ 0.91
RARA-201ENST00000254066 GPD1P21695 349 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 HLCSP50747 726 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 KCNJ8Q15842 424 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 DCLK2Q8N568 766 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 ZUFSPQ96AP4 578 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 MAELQ96JY0 434 aaKnown RBP20.73■□□□□ 0.91
RARA-201ENST00000254066 RBBP8Q99708 897 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 HAPLN2Q9GZV7 340 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 PCDHAC1Q9H158 963 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 NANOGQ9H9S0 305 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 RRAGCQ9HB90 399 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 ZNF358Q9NW07 568 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 TJP2Q9UDY2 1190 aa20.73■□□□□ 0.91
RARA-201ENST00000254066 LRP8Q14114 963 aa20.72■□□□□ 0.91
RARA-201ENST00000254066 CASC4Q6P4E1 433 aa20.72■□□□□ 0.91
RARA-201ENST00000254066 HACD2Q6Y1H2 254 aa20.72■□□□□ 0.91
RARA-201ENST00000254066 TBCBQ99426 244 aa20.72■□□□□ 0.91
RARA-201ENST00000254066 ZNF670Q9BS34 389 aa20.72■□□□□ 0.91
RARA-201ENST00000254066 FTHL17Q9BXU8 183 aa20.72■□□□□ 0.91
RARA-201ENST00000254066 WDR12Q9GZL7 423 aaKnown RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms