RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 PTPRDP23468 1912 aa19.01■□□□□ 0.63
PDLIM4-201ENST00000253754 SERPINE1P05121 402 aa19.01■□□□□ 0.63
PDLIM4-201ENST00000253754 SAT1P21673 171 aa19.01■□□□□ 0.63
PDLIM4-201ENST00000253754 CCNCP24863 283 aa19.01■□□□□ 0.63
PDLIM4-201ENST00000253754 COG7P83436 770 aa19.01■□□□□ 0.63
PDLIM4-201ENST00000253754 BEND5Q7L4P6 421 aa19.01■□□□□ 0.63
PDLIM4-201ENST00000253754 TTC9BQ8N6N2 239 aa19.01■□□□□ 0.63
PDLIM4-201ENST00000253754 PIWIL2Q8TC59 973 aaKnown RBP19.01■□□□□ 0.63
PDLIM4-201ENST00000253754 TSGA13Q96PP4 275 aa19.01■□□□□ 0.63
PDLIM4-201ENST00000253754 FICDQ9BVA6 458 aa19.01■□□□□ 0.63
PDLIM4-201ENST00000253754 ADAM28Q9UKQ2 775 aa19.01■□□□□ 0.63
PDLIM4-201ENST00000253754 E9PAM4 449 aa19■□□□□ 0.63
PDLIM4-201ENST00000253754 CACNG3O60359 315 aa19■□□□□ 0.63
PDLIM4-201ENST00000253754 HLA-DQB2P05538 268 aa19■□□□□ 0.63
PDLIM4-201ENST00000253754 HOXC13P31276 330 aa19■□□□□ 0.63
PDLIM4-201ENST00000253754 USP46P62068 366 aa19■□□□□ 0.63
PDLIM4-201ENST00000253754 KDSRQ06136 332 aa19■□□□□ 0.63
PDLIM4-201ENST00000253754 INSCQ1MX18 579 aa19■□□□□ 0.63
PDLIM4-201ENST00000253754 NSMCE1Q8WV22 266 aa19■□□□□ 0.63
PDLIM4-201ENST00000253754 MOCOSQ96EN8 888 aa19■□□□□ 0.63
PDLIM4-201ENST00000253754 VPS39Q96JC1 886 aa19■□□□□ 0.63
PDLIM4-201ENST00000253754 B3GALT6Q96L58 329 aa19■□□□□ 0.63
PDLIM4-201ENST00000253754 NUDCD1Q96RS6 583 aa19■□□□□ 0.63
PDLIM4-201ENST00000253754 TBL1YQ9BQ87 522 aa19■□□□□ 0.63
PDLIM4-201ENST00000253754 LBHD1Q9BQE6 289 aaPredicted RBP19■□□□□ 0.63
PDLIM4-201ENST00000253754 MCMBPQ9BTE3 642 aa19■□□□□ 0.63
PDLIM4-201ENST00000253754 TUBB6Q9BUF5 446 aa19■□□□□ 0.63
PDLIM4-201ENST00000253754 TRIM62Q9BVG3 475 aa19■□□□□ 0.63
PDLIM4-201ENST00000253754 ATXN3LQ9H3M9 355 aa19■□□□□ 0.63
PDLIM4-201ENST00000253754 RNPEPL1Q9HAU8 725 aa19■□□□□ 0.63
PDLIM4-201ENST00000253754 ACSS2Q9NR19 701 aa19■□□□□ 0.63
PDLIM4-201ENST00000253754 C15orf41Q9Y2V0 281 aa19■□□□□ 0.63
PDLIM4-201ENST00000253754 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19■□□□□ 0.63
PDLIM4-201ENST00000253754 PRR5-ARHGAP8B1AHC4 643 aa19■□□□□ 0.63
PDLIM4-201ENST00000253754 RALBP11234 206 aa19■□□□□ 0.63
PDLIM4-201ENST00000253754 CPA3P15088 417 aa19■□□□□ 0.63
PDLIM4-201ENST00000253754 ARHGAP8P85298 464 aa19■□□□□ 0.63
PDLIM4-201ENST00000253754 GLOD4Q9HC38 313 aa19■□□□□ 0.63
PDLIM4-201ENST00000253754 SLC39A10Q9ULF5 831 aa19■□□□□ 0.63
PDLIM4-201ENST00000253754 TANC1Q9C0D5 1861 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 MAGEB16A2A368 324 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 KCNU1A8MYU2 1149 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 PMPCBO75439 489 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 SOAT2O75908 522 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 C2P06681 752 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 PAX3P23760 479 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 TUBB3Q13509 450 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 FRG1Q14331 258 aaKnown RBP18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 GRM3Q14832 879 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 VWA5B1Q5TIE3 1220 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 PIK3R6Q5UE93 754 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 FAM91A1Q658Y4 838 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 DENND5AQ6IQ26 1287 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 TEX9Q8N6V9 391 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 PAWRQ96IZ0 340 aaKnown RBP18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 CASD1Q96PB1 797 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 IL12RB2Q99665 862 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 KIFC1Q9BW19 673 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 CCDC106Q9BWC9 280 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 ZCWPW1Q9H0M4 648 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 CATSPERBQ9H7T0 1116 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 CPSF2Q9P2I0 782 aaKnown RBP18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 SLC2A6Q9UGQ3 507 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 MATN3O15232 486 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 FGF10O15520 208 aaPredicted RBP18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 CXCL10P02778 98 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 GJA8P48165 433 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 PAPOLAP51003 745 aaKnown RBP18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 DBN1Q16643 649 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 NAPRTQ6XQN6 538 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 TFAP2DQ7Z6R9 452 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 CLEC14AQ86T13 490 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 WDR75Q8IWA0 830 aaKnown RBP18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 MCUR1Q96AQ8 359 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 FCRL5Q96RD9 977 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 MCOLN1Q9GZU1 580 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 TMEM39AQ9NV64 488 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 RBM22Q9NW64 420 aaKnown RBP eCLIP18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 HCSTQ9UBK5 93 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 PATJQ8NI35 1801 aa18.99■□□□□ 0.63
PDLIM4-201ENST00000253754 B2RBV5 119 aa18.98■□□□□ 0.63
PDLIM4-201ENST00000253754 G3V2L1 256 aa18.98■□□□□ 0.63
PDLIM4-201ENST00000253754 GABRB3P28472 473 aa18.98■□□□□ 0.63
PDLIM4-201ENST00000253754 AVPR1AP37288 418 aa18.98■□□□□ 0.63
PDLIM4-201ENST00000253754 CHRNA4P43681 627 aa18.98■□□□□ 0.63
PDLIM4-201ENST00000253754 NUMBP49757 651 aa18.98■□□□□ 0.63
PDLIM4-201ENST00000253754 KHDC1Q4VXA5 237 aaKnown RBP18.98■□□□□ 0.63
PDLIM4-201ENST00000253754 C1orf53Q5VUE5 145 aa18.98■□□□□ 0.63
PDLIM4-201ENST00000253754 SPNS2Q8IVW8 549 aa18.98■□□□□ 0.63
PDLIM4-201ENST00000253754 DENND6AQ8IWF6 608 aa18.98■□□□□ 0.63
PDLIM4-201ENST00000253754 ARMC5Q96C12 935 aa18.98■□□□□ 0.63
PDLIM4-201ENST00000253754 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.98■□□□□ 0.63
PDLIM4-201ENST00000253754 AAR2Q9Y312 384 aaKnown RBP18.98■□□□□ 0.63
PDLIM4-201ENST00000253754 PHGDHO43175 533 aaKnown RBP18.98■□□□□ 0.63
PDLIM4-201ENST00000253754 TADA2AO75478 443 aa18.98■□□□□ 0.63
PDLIM4-201ENST00000253754 TBX18O95935 607 aa18.98■□□□□ 0.63
PDLIM4-201ENST00000253754 ABCE1P61221 599 aaKnown RBP18.98■□□□□ 0.63
PDLIM4-201ENST00000253754 MPP1Q00013 466 aa18.98■□□□□ 0.63
PDLIM4-201ENST00000253754 ZNF33AQ06730 810 aa18.98■□□□□ 0.63
PDLIM4-201ENST00000253754 CDK18Q07002 472 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms