RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 FZD8Q9H461 694 aa12.16□□□□□ -0.46
USHBP1-201ENST00000252597 POMKQ9H5K3 350 aa12.16□□□□□ -0.46
USHBP1-201ENST00000252597 FBRSL1Q9HCM7 1045 aaKnown RBP12.16□□□□□ -0.46
USHBP1-201ENST00000252597 E7ENX8 843 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 CASQ2O14958 399 aaPredicted RBP12.15□□□□□ -0.46
USHBP1-201ENST00000252597 TMCC1O94876 653 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 RPS12P25398 132 aaKnown RBP12.15□□□□□ -0.46
USHBP1-201ENST00000252597 YAP1P46937 504 aaKnown RBP12.15□□□□□ -0.46
USHBP1-201ENST00000252597 SNX16P57768 344 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 PSME3P61289 254 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 LAMC2Q13753 1193 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 RBBP8Q99708 897 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 RTKNQ9BST9 563 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 CYP3A43Q9HB55 503 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 ARHGEF38Q9NXL2 777 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 THEGQ9P2T0 379 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 AP4S1Q9Y587 144 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 SMIM31A0A1B0GVY4 71 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 TTC24A2A3L6 582 aaPredicted RBP12.15□□□□□ -0.46
USHBP1-201ENST00000252597 HUS1O60921 280 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 USP17L7P0C7H9 530 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 TPSB2P20231 275 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 CNTFP26441 200 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 DPP6P42658 865 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 CHRNA4P43681 627 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 CSE1LP55060 971 aaKnown RBP12.15□□□□□ -0.46
USHBP1-201ENST00000252597 TNFAIP2Q03169 654 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 ADGRE1Q14246 886 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 CAPRIN1Q14444 709 aaKnown RBP12.15□□□□□ -0.46
USHBP1-201ENST00000252597 TPSAB1Q15661 275 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 TAZQ16635 292 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 GRTP1Q5TC63 336 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 ZNF470Q6ECI4 717 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 EPGNQ6UW88 154 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 SCIMPQ6UWF3 145 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 FAM110BQ8TC76 370 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 HASPINQ8TF76 798 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 LPGAT1Q92604 370 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 CNDP1Q96KN2 507 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 FSD1LQ9BXM9 530 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 DNAAF2Q9NVR5 837 aaKnown RBP12.15□□□□□ -0.46
USHBP1-201ENST00000252597 DNAJC28Q9NX36 388 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 SORCS3Q9UPU3 1222 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 ACOT9Q9Y305 439 aa12.15□□□□□ -0.46
USHBP1-201ENST00000252597 NR5A2O00482 541 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 NRP1O14786 923 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 HBP1O60381 514 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 CRCPO75575 148 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 BEST1O76090 585 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 PPARGP37231 505 aaPredicted RBP12.14□□□□□ -0.47
USHBP1-201ENST00000252597 TKTL1P51854 596 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 FOXD4Q12950 439 aaPredicted RBP12.14□□□□□ -0.47
USHBP1-201ENST00000252597 ATP1A4Q13733 1029 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 CCDC153Q494R4 210 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 DCBLD1Q8N8Z6 715 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 PDZD8Q8NEN9 1154 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 PAIP1Q9H074 479 aaKnown RBP12.14□□□□□ -0.47
USHBP1-201ENST00000252597 ERAP1Q9NZ08 941 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 BCAP29Q9UHQ4 241 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 COPG1Q9Y678 874 aaKnown RBP12.14□□□□□ -0.47
USHBP1-201ENST00000252597 COMMD10Q9Y6G5 202 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 FZD9O00144 591 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 VILLO15195 856 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 TRMUO75648 421 aaKnown RBP12.14□□□□□ -0.47
USHBP1-201ENST00000252597 IGFBP6P24592 240 aaPredicted RBP12.14□□□□□ -0.47
USHBP1-201ENST00000252597 YWHAQP27348 245 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 FASTKQ14296 549 aaKnown RBP12.14□□□□□ -0.47
USHBP1-201ENST00000252597 PLCL1Q15111 1095 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 FAM83EQ2M2I3 478 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 CELF3Q5SZQ8 465 aaKnown RBP12.14□□□□□ -0.47
USHBP1-201ENST00000252597 OTUD3Q5T2D3 398 aaPredicted RBP12.14□□□□□ -0.47
USHBP1-201ENST00000252597 ESRP1Q6NXG1 681 aaKnown RBP12.14□□□□□ -0.47
USHBP1-201ENST00000252597 TTC33Q6PID6 262 aaPredicted RBP12.14□□□□□ -0.47
USHBP1-201ENST00000252597 PARP8Q8N3A8 854 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 KHSRPQ92945 711 aaKnown RBP eCLIP12.14□□□□□ -0.47
USHBP1-201ENST00000252597 THAP11Q96EK4 314 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 SGIP1Q9BQI5 828 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 FAM96AQ9H5X1 160 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 PLEKHA5Q9HAU0 1116 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 MTMR10Q9NXD2 777 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 SLC2A6Q9UGQ3 507 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 CROCCQ5TZA2 2017 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 TMX2-CTNND1H3BSU7 103 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 XPOTO43592 962 aaKnown RBP12.14□□□□□ -0.47
USHBP1-201ENST00000252597 RECQL4O94761 1208 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 MCF2P10911 925 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 SLC7A2P52569 658 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 BST2Q10589 180 aaKnown RBP12.14□□□□□ -0.47
USHBP1-201ENST00000252597 ZIK1Q3SY52 487 aaPredicted RBP12.14□□□□□ -0.47
USHBP1-201ENST00000252597 PGM2L1Q6PCE3 622 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 TRIM74Q86UV6 250 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 TRIM73Q86UV7 250 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 HERC6Q8IVU3 1022 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 APPL2Q8NEU8 664 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 BEST2Q8NFU1 509 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 SEPHS2Q99611 448 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 FICDQ9BVA6 458 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 RHOBTB2Q9BYZ6 727 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 ULBP1Q9BZM6 244 aa12.14□□□□□ -0.47
USHBP1-201ENST00000252597 CDHR5Q9HBB8 845 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms