RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 C14orf80Q86SX3 495 aa16.43■□□□□ 0.22
UBE3D-201ENST00000237186 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.43■□□□□ 0.22
UBE3D-201ENST00000237186 ARHGAP18Q8N392 663 aa16.43■□□□□ 0.22
UBE3D-201ENST00000237186 TMEM151AQ8N4L1 468 aa16.43■□□□□ 0.22
UBE3D-201ENST00000237186 SREK1Q8WXA9 508 aaKnown RBP16.43■□□□□ 0.22
UBE3D-201ENST00000237186 RSRC1Q96IZ7 334 aaKnown RBP16.43■□□□□ 0.22
UBE3D-201ENST00000237186 C1QTNF1Q9BXJ1 281 aa16.43■□□□□ 0.22
UBE3D-201ENST00000237186 FBXO44Q9H4M3 255 aa16.43■□□□□ 0.22
UBE3D-201ENST00000237186 TBC1D13Q9NVG8 400 aa16.43■□□□□ 0.22
UBE3D-201ENST00000237186 PNPOQ9NVS9 261 aa16.43■□□□□ 0.22
UBE3D-201ENST00000237186 OSER1Q9NX31 292 aa16.43■□□□□ 0.22
UBE3D-201ENST00000237186 TLR6Q9Y2C9 796 aa16.43■□□□□ 0.22
UBE3D-201ENST00000237186 CDY1Q9Y6F8 540 aa16.43■□□□□ 0.22
UBE3D-201ENST00000237186 ZNF638Q14966 1978 aaKnown RBP16.42■□□□□ 0.22
UBE3D-201ENST00000237186 FAM92AA1XBS5 289 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 F8W8V4 182 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 TRIM13O60858 407 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 IBSPP21815 317 aaPredicted RBP16.42■□□□□ 0.22
UBE3D-201ENST00000237186 PRKAA2P54646 552 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 GRM3Q14832 879 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 NOMO2Q5JPE7 1267 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 CLLU1OSQ5K130 101 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 TNS4Q8IZW8 715 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 UMODL1-AS1Q8N2C9 162 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 ACVR1CQ8NER5 493 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 GIMAP7Q8NHV1 300 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 ATXN7L3BQ96GX2 97 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 CAB39LQ9H9S4 337 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 ARNT2Q9HBZ2 717 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 RBM22Q9NW64 420 aaKnown RBP eCLIP16.42■□□□□ 0.22
UBE3D-201ENST00000237186 OXSMQ9NWU1 459 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 DONSONQ9NYP3 566 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 SYN3O14994 580 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 TM7SF2O76062 418 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 PEX11BO96011 259 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 AHSGP02765 367 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 HLA-DQB2P05538 268 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 OR4Q2P0C623 313 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 CKBP12277 381 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 GABRB3P28472 473 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 GMPRP36959 345 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 MAGEA11P43364 429 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 PAPOLAP51003 745 aaKnown RBP16.42■□□□□ 0.22
UBE3D-201ENST00000237186 NDST2P52849 883 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 IRF9Q00978 393 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 CMPK2Q5EBM0 449 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 ACSBG2Q5FVE4 666 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 RNF180Q86T96 592 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 SCN4BQ8IWT1 228 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 REM2Q8IYK8 340 aaPredicted RBP16.42■□□□□ 0.22
UBE3D-201ENST00000237186 ZNF683Q8IZ20 524 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 IPMKQ8NFU5 416 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 TREX1Q9NSU2 369 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 IPO11Q9UI26 975 aaKnown RBP16.42■□□□□ 0.22
UBE3D-201ENST00000237186 TLK1Q9UKI8 766 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 TCAF1Q9Y4C2 921 aa16.42■□□□□ 0.22
UBE3D-201ENST00000237186 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.41■□□□□ 0.22
UBE3D-201ENST00000237186 MYCNP04198 464 aaPredicted RBP16.41■□□□□ 0.22
UBE3D-201ENST00000237186 RHOQP17081 205 aa16.41■□□□□ 0.22
UBE3D-201ENST00000237186 ARNTP27540 789 aa16.41■□□□□ 0.22
UBE3D-201ENST00000237186 ACLYP53396 1101 aa16.41■□□□□ 0.22
UBE3D-201ENST00000237186 HNRNPDQ14103 355 aaKnown RBP16.41■□□□□ 0.22
UBE3D-201ENST00000237186 UBAP2LQ14157 1087 aaKnown RBP16.41■□□□□ 0.22
UBE3D-201ENST00000237186 KPNB1Q14974 876 aaKnown RBP16.41■□□□□ 0.22
UBE3D-201ENST00000237186 PIK3R6Q5UE93 754 aa16.41■□□□□ 0.22
UBE3D-201ENST00000237186 NAPRTQ6XQN6 538 aa16.41■□□□□ 0.22
UBE3D-201ENST00000237186 MAB21L3Q8N8X9 362 aa16.41■□□□□ 0.22
UBE3D-201ENST00000237186 PPHLN1Q8NEY8 458 aaKnown RBP16.41■□□□□ 0.22
UBE3D-201ENST00000237186 STON2Q8WXE9 905 aa16.41■□□□□ 0.22
UBE3D-201ENST00000237186 MRGPRX2Q96LB1 330 aa16.41■□□□□ 0.22
UBE3D-201ENST00000237186 FICDQ9BVA6 458 aa16.41■□□□□ 0.22
UBE3D-201ENST00000237186 SLC25A51Q9H1U9 297 aa16.41■□□□□ 0.22
UBE3D-201ENST00000237186 NOL6Q9H6R4 1146 aaKnown RBP16.41■□□□□ 0.22
UBE3D-201ENST00000237186 PRDM5Q9NQX1 630 aaPredicted RBP16.41■□□□□ 0.22
UBE3D-201ENST00000237186 RNF186Q9NXI6 227 aa16.41■□□□□ 0.22
UBE3D-201ENST00000237186 STOML1Q9UBI4 398 aa16.41■□□□□ 0.22
UBE3D-201ENST00000237186 SLC39A10Q9ULF5 831 aa16.41■□□□□ 0.22
UBE3D-201ENST00000237186 MAGED2Q9UNF1 606 aaPredicted RBP16.41■□□□□ 0.22
UBE3D-201ENST00000237186 GOLGA8TH3BQL2 631 aa16.4■□□□□ 0.22
UBE3D-201ENST00000237186 COL6A1P12109 1028 aa16.4■□□□□ 0.22
UBE3D-201ENST00000237186 ELNP15502 786 aa16.4■□□□□ 0.22
UBE3D-201ENST00000237186 ELF1P32519 619 aa16.4■□□□□ 0.22
UBE3D-201ENST00000237186 CPOXP36551 454 aa16.4■□□□□ 0.22
UBE3D-201ENST00000237186 CPA2P48052 419 aa16.4■□□□□ 0.22
UBE3D-201ENST00000237186 KDSRQ06136 332 aa16.4■□□□□ 0.22
UBE3D-201ENST00000237186 TNK2Q07912 1038 aa16.4■□□□□ 0.22
UBE3D-201ENST00000237186 SLC12A1Q13621 1099 aa16.4■□□□□ 0.22
UBE3D-201ENST00000237186 MBTPS1Q14703 1052 aa16.4■□□□□ 0.22
UBE3D-201ENST00000237186 MAP3K21Q5TCX8 1036 aa16.4■□□□□ 0.22
UBE3D-201ENST00000237186 METTL21CQ5VZV1 264 aa16.4■□□□□ 0.22
UBE3D-201ENST00000237186 KIAA0930Q6ICG6 404 aaPredicted RBP16.4■□□□□ 0.22
UBE3D-201ENST00000237186 ESRP1Q6NXG1 681 aaKnown RBP16.4■□□□□ 0.22
UBE3D-201ENST00000237186 EPGNQ6UW88 154 aa16.4■□□□□ 0.22
UBE3D-201ENST00000237186 ZYG11AQ6WRX3 759 aa16.4■□□□□ 0.22
UBE3D-201ENST00000237186 NET1Q7Z628 596 aaPredicted RBP16.4■□□□□ 0.22
UBE3D-201ENST00000237186 FBXO27Q8NI29 283 aa16.4■□□□□ 0.22
UBE3D-201ENST00000237186 WDR60Q8WVS4 1066 aa16.4■□□□□ 0.22
UBE3D-201ENST00000237186 LINC01599Q8WXQ3 324 aa16.4■□□□□ 0.22
UBE3D-201ENST00000237186 ZNF570Q96NI8 536 aa16.4■□□□□ 0.22
UBE3D-201ENST00000237186 PRKD2Q9BZL6 878 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms