RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 MDH1P40925 334 aaKnown RBP24.19■■□□□ 1.46
RRP9-201ENST00000232888 ATP1A2P50993 1020 aa24.19■■□□□ 1.46
RRP9-201ENST00000232888 OXCT1P55809 520 aa24.19■■□□□ 1.46
RRP9-201ENST00000232888 ZXDBP98169 803 aa24.19■■□□□ 1.46
RRP9-201ENST00000232888 NAB1Q13506 487 aa24.19■■□□□ 1.46
RRP9-201ENST00000232888 TMED2Q15363 201 aa24.19■■□□□ 1.46
RRP9-201ENST00000232888 KBTBD12Q3ZCT8 623 aa24.19■■□□□ 1.46
RRP9-201ENST00000232888 IL31Q6EBC2 164 aa24.19■■□□□ 1.46
RRP9-201ENST00000232888 FAM109BQ6ICB4 259 aaPredicted RBP24.19■■□□□ 1.46
RRP9-201ENST00000232888 LRRC6Q86X45 466 aa24.19■■□□□ 1.46
RRP9-201ENST00000232888 SYBUQ9NX95 663 aa24.19■■□□□ 1.46
RRP9-201ENST00000232888 CFAP97Q9P2B7 532 aa24.19■■□□□ 1.46
RRP9-201ENST00000232888 DNMT3BQ9UBC3 853 aaKnown RBP24.19■■□□□ 1.46
RRP9-201ENST00000232888 DENND4CQ5VZ89 1909 aa24.18■■□□□ 1.46
RRP9-201ENST00000232888 E2F8A0AVK6 867 aa24.18■■□□□ 1.46
RRP9-201ENST00000232888 FAM159BA6NKW6 160 aa24.18■■□□□ 1.46
RRP9-201ENST00000232888 TSPAN3O60637 253 aa24.18■■□□□ 1.46
RRP9-201ENST00000232888 C1QAP02745 245 aa24.18■■□□□ 1.46
RRP9-201ENST00000232888 RHOP08100 348 aa24.18■■□□□ 1.46
RRP9-201ENST00000232888 EPCAMP16422 314 aa24.18■■□□□ 1.46
RRP9-201ENST00000232888 ADRA1AP35348 466 aa24.18■■□□□ 1.46
RRP9-201ENST00000232888 SGSHP51688 502 aa24.18■■□□□ 1.46
RRP9-201ENST00000232888 SLC14A2Q15849 920 aa24.18■■□□□ 1.46
RRP9-201ENST00000232888 GPR158Q5T848 1215 aa24.18■■□□□ 1.46
RRP9-201ENST00000232888 SPRED2Q7Z698 418 aa24.18■■□□□ 1.46
RRP9-201ENST00000232888 SLC26A11Q86WA9 606 aa24.18■■□□□ 1.46
RRP9-201ENST00000232888 CYP4X1Q8N118 509 aa24.18■■□□□ 1.46
RRP9-201ENST00000232888 SPATA22Q8NHS9 363 aa24.18■■□□□ 1.46
RRP9-201ENST00000232888 DCAKDQ8WVC6 231 aa24.18■■□□□ 1.46
RRP9-201ENST00000232888 PRKD2Q9BZL6 878 aa24.18■■□□□ 1.46
RRP9-201ENST00000232888 TBK1Q9UHD2 729 aa24.18■■□□□ 1.46
RRP9-201ENST00000232888 A0A0D9SEW6 157 aa24.17■■□□□ 1.46
RRP9-201ENST00000232888 FAM237BA0A1B0GVD1 139 aa24.17■■□□□ 1.46
RRP9-201ENST00000232888 ZNF197O14709 1029 aa24.17■■□□□ 1.46
RRP9-201ENST00000232888 TBL1XO60907 577 aa24.17■■□□□ 1.46
RRP9-201ENST00000232888 RFPL2O75678 378 aa24.17■■□□□ 1.46
RRP9-201ENST00000232888 CSPG5O95196 566 aa24.17■■□□□ 1.46
RRP9-201ENST00000232888 INHBAP08476 426 aa24.17■■□□□ 1.46
RRP9-201ENST00000232888 LGSNQ5TDP6 509 aa24.17■■□□□ 1.46
RRP9-201ENST00000232888 ALG1LQ6GMV1 187 aa24.17■■□□□ 1.46
RRP9-201ENST00000232888 TRABD2AQ86V40 505 aa24.17■■□□□ 1.46
RRP9-201ENST00000232888 PTCD2Q8WV60 388 aaKnown RBP24.17■■□□□ 1.46
RRP9-201ENST00000232888 TADA1Q96BN2 335 aa24.17■■□□□ 1.46
RRP9-201ENST00000232888 CENPTQ96BT3 561 aa24.17■■□□□ 1.46
RRP9-201ENST00000232888 POLR1EQ9GZS1 481 aaKnown RBP24.17■■□□□ 1.46
RRP9-201ENST00000232888 ARNT2Q9HBZ2 717 aa24.17■■□□□ 1.46
RRP9-201ENST00000232888 HCFC1R1Q9NWW0 138 aa24.17■■□□□ 1.46
RRP9-201ENST00000232888 UBP1Q9NZI7 540 aa24.17■■□□□ 1.46
RRP9-201ENST00000232888 SEPT3Q9UH03 358 aa24.17■■□□□ 1.46
RRP9-201ENST00000232888 IQANK1A0A1B0GTG1 560 aa24.16■■□□□ 1.46
RRP9-201ENST00000232888 SRRM3A6NNA2 597 aaPredicted RBP24.16■■□□□ 1.46
RRP9-201ENST00000232888 LEFTY2O00292 366 aa24.16■■□□□ 1.46
RRP9-201ENST00000232888 USP12O75317 370 aa24.16■■□□□ 1.46
RRP9-201ENST00000232888 USP1O94782 785 aa24.16■■□□□ 1.46
RRP9-201ENST00000232888 LUC7L3O95232 432 aaKnown RBP24.16■■□□□ 1.46
RRP9-201ENST00000232888 MT-CYBP00156 380 aaPredicted RBP24.16■■□□□ 1.46
RRP9-201ENST00000232888 CES1P23141 567 aa24.16■■□□□ 1.46
RRP9-201ENST00000232888 AVPR1AP37288 418 aa24.16■■□□□ 1.46
RRP9-201ENST00000232888 CCR2P41597 374 aa24.16■■□□□ 1.46
RRP9-201ENST00000232888 ZNF235Q14590 738 aa24.16■■□□□ 1.46
RRP9-201ENST00000232888 MPPE1Q53F39 396 aa24.16■■□□□ 1.46
RRP9-201ENST00000232888 CXorf57Q6NSI4 855 aaKnown RBP24.16■■□□□ 1.46
RRP9-201ENST00000232888 KDELC1Q6UW63 502 aa24.16■■□□□ 1.46
RRP9-201ENST00000232888 RANBP10Q6VN20 620 aa24.16■■□□□ 1.46
RRP9-201ENST00000232888 PRPF39Q86UA1 669 aaKnown RBP24.16■■□□□ 1.46
RRP9-201ENST00000232888 TMEM135Q86UB9 458 aa24.16■■□□□ 1.46
RRP9-201ENST00000232888 CMTM8Q8IZV2 173 aa24.16■■□□□ 1.46
RRP9-201ENST00000232888 IPMKQ8NFU5 416 aa24.16■■□□□ 1.46
RRP9-201ENST00000232888 OR7D4Q8NG98 312 aa24.16■■□□□ 1.46
RRP9-201ENST00000232888 CDKL2Q92772 493 aa24.16■■□□□ 1.46
RRP9-201ENST00000232888 SPON2Q9BUD6 331 aa24.16■■□□□ 1.46
RRP9-201ENST00000232888 FSD1LQ9BXM9 530 aa24.16■■□□□ 1.46
RRP9-201ENST00000232888 ATP13A1Q9HD20 1204 aa24.16■■□□□ 1.46
RRP9-201ENST00000232888 UBA2Q9UBT2 640 aaPredicted RBP24.16■■□□□ 1.46
RRP9-201ENST00000232888 YBX2Q9Y2T7 364 aaKnown RBP24.16■■□□□ 1.46
RRP9-201ENST00000232888 CHD5Q8TDI0 1954 aa24.16■■□□□ 1.46
RRP9-201ENST00000232888 H0Y626 953 aa24.16■■□□□ 1.46
RRP9-201ENST00000232888 PAPLNO95428 1278 aa24.16■■□□□ 1.46
RRP9-201ENST00000232888 KRT15P19012 456 aa24.16■■□□□ 1.46
RRP9-201ENST00000232888 ITKQ08881 620 aa24.16■■□□□ 1.46
RRP9-201ENST00000232888 CRYMQ14894 314 aa24.16■■□□□ 1.46
RRP9-201ENST00000232888 EFTUD2Q15029 972 aaKnown RBP eCLIP24.16■■□□□ 1.462e-7■■■■■ 37.5
RRP9-201ENST00000232888 POTEHQ6S545 545 aa24.16■■□□□ 1.46
RRP9-201ENST00000232888 FICDQ9BVA6 458 aa24.16■■□□□ 1.46
RRP9-201ENST00000232888 SSU72Q9NP77 194 aaKnown RBP24.16■■□□□ 1.46
RRP9-201ENST00000232888 SOX13Q9UN79 622 aa24.16■■□□□ 1.46
RRP9-201ENST00000232888 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.15■■□□□ 1.46
RRP9-201ENST00000232888 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.15■■□□□ 1.46
RRP9-201ENST00000232888 MOSPD3O75425 235 aa24.15■■□□□ 1.46
RRP9-201ENST00000232888 GJA1P17302 382 aa24.15■■□□□ 1.46
RRP9-201ENST00000232888 SLC18A1P54219 525 aa24.15■■□□□ 1.46
RRP9-201ENST00000232888 WNT3AP56704 352 aa24.15■■□□□ 1.46
RRP9-201ENST00000232888 RAB30Q15771 203 aa24.15■■□□□ 1.46
RRP9-201ENST00000232888 RNF219Q5W0B1 726 aaPredicted RBP24.15■■□□□ 1.46
RRP9-201ENST00000232888 TDRD5Q8NAT2 981 aaKnown RBP24.15■■□□□ 1.46
RRP9-201ENST00000232888 OR52K2Q8NGK3 314 aa24.15■■□□□ 1.46
RRP9-201ENST00000232888 ARRDC2Q8TBH0 407 aa24.15■■□□□ 1.46
RRP9-201ENST00000232888 MRGPRX2Q96LB1 330 aa24.15■■□□□ 1.46
RRP9-201ENST00000232888 PSKH2Q96QS6 385 aa24.15■■□□□ 1.46
RRP9-201ENST00000232888 SELENOSQ9BQE4 189 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms