RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 RTKNQ9BST9 563 aa14.38□□□□□ -0.11
PCDHB3-201ENST00000231130 POLR1BQ9H9Y6 1135 aa14.38□□□□□ -0.11
PCDHB3-201ENST00000231130 VTA1Q9NP79 307 aa14.38□□□□□ -0.11
PCDHB3-201ENST00000231130 DNAJC28Q9NX36 388 aa14.38□□□□□ -0.11
PCDHB3-201ENST00000231130 TRPC5Q9UL62 973 aaPredicted RBP14.38□□□□□ -0.11
PCDHB3-201ENST00000231130 CARD8Q9Y2G2 431 aa14.38□□□□□ -0.11
PCDHB3-201ENST00000231130 RNF11Q9Y3C5 154 aa14.38□□□□□ -0.11
PCDHB3-201ENST00000231130 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.38□□□□□ -0.11
PCDHB3-201ENST00000231130 ZNF195O14628 629 aa14.38□□□□□ -0.11
PCDHB3-201ENST00000231130 DPP6P42658 865 aa14.38□□□□□ -0.11
PCDHB3-201ENST00000231130 LAMTOR4Q0VGL1 99 aa14.38□□□□□ -0.11
PCDHB3-201ENST00000231130 MTX3Q5HYI7 312 aa14.38□□□□□ -0.11
PCDHB3-201ENST00000231130 PITRM1Q5JRX3 1037 aa14.38□□□□□ -0.11
PCDHB3-201ENST00000231130 AARS2Q5JTZ9 985 aaKnown RBP14.38□□□□□ -0.11
PCDHB3-201ENST00000231130 RDM1Q8NG50 284 aa14.38□□□□□ -0.11
PCDHB3-201ENST00000231130 NAA50Q9GZZ1 169 aaKnown RBP14.38□□□□□ -0.11
PCDHB3-201ENST00000231130 ILKAPQ9H0C8 392 aaPredicted RBP14.38□□□□□ -0.11
PCDHB3-201ENST00000231130 CLK4Q9HAZ1 481 aaKnown RBP14.38□□□□□ -0.11
PCDHB3-201ENST00000231130 MOCS1Q9NZB8 636 aa14.38□□□□□ -0.11
PCDHB3-201ENST00000231130 ZNHIT2Q9UHR6 403 aa14.38□□□□□ -0.11
PCDHB3-201ENST00000231130 SIX4Q9UIU6 781 aa14.38□□□□□ -0.11
PCDHB3-201ENST00000231130 HCRTO43612 131 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 BAIAP3O94812 1187 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 ME2P23368 584 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 CLCN3P51790 818 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 JADE1Q6IE81 842 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 C16orf89Q6UX73 402 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 GPR180Q86V85 440 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 LHX5Q9H2C1 402 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 IL1RL2Q9HB29 575 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 CORINQ9Y5Q5 1042 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 RGSL1A5PLK6 1076 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 LACTBL1A8MY62 500 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 AQP9O43315 295 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 PLA2G6O60733 806 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 RPL26P61254 145 aaKnown RBP14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 ATF7IP2Q5U623 682 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 RSBN1LQ6PCB5 846 aaPredicted RBP14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 GK5Q6ZS86 529 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 CHST15Q7LFX5 561 aaPredicted RBP14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 HTR3CQ8WXA8 447 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 NOL6Q9H6R4 1146 aaKnown RBP14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 NRBP2Q9NSY0 501 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 SCHIP1Q9P0W5 487 aaPredicted RBP14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 SLX4Q8IY92 1834 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 KPNA4O00629 521 aaPredicted RBP14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 MYO1DO94832 1006 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 PRKCGP05129 697 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 GARSP41250 739 aaKnown RBP14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 PTK2BQ14289 1009 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 ZNF460Q14592 562 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 TIGD2Q4W5G0 525 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 PPP2R2DQ66LE6 453 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 SEL1L3Q68CR1 1132 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 EPGNQ6UW88 154 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 RPS27LQ71UM5 84 aaKnown RBP14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 LRRC39Q96DD0 335 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 MFSD3Q96ES6 412 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 HPDLQ96IR7 371 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 CPB2Q96IY4 423 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 RANBP9Q96S59 729 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 MTG1Q9BT17 334 aaPredicted RBP14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 ZNF229Q9UJW7 825 aa14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 CPSF3Q9UKF6 684 aaKnown RBP14.37□□□□□ -0.11
PCDHB3-201ENST00000231130 BCLAF3A2AJT9 711 aaKnown RBP14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 C7orf72A4D263 438 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 SAC3D1A6NKF1 404 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 FAM47E-STBD1D6RA91 191 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 TRIM13O60858 407 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 CYP3A5P20815 502 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 ADORA2BP29275 332 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 DNASE1L3Q13609 305 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 ARL13AQ5H913 290 aaPredicted RBP14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 FSTL4Q6MZW2 842 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 ZBTB49Q6ZSB9 765 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 HEATR4Q86WZ0 1026 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 RNF135Q8IUD6 432 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 USP33Q8TEY7 942 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 APBA2Q99767 749 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 FRMD8Q9BZ67 464 aaPredicted RBP14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 HIPK3Q9H422 1215 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 NOL11Q9H8H0 719 aaKnown RBP14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 GTSE1Q9NYZ3 720 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 AP4E1Q9UPM8 1137 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 AP4S1Q9Y587 144 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 PCDHGA3Q9Y5H0 932 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 TRIP11Q15643 1979 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 A0A087WXM4 84 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 PLOD2O00469 737 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 TGM2P21980 687 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 NME5P56597 212 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 PPP1R26Q5T8A7 1209 aaPredicted RBP14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 CCDC185Q8N715 623 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 CYGBQ8WWM9 190 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 MRPL46Q9H2W6 279 aaKnown RBP14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 CNGB3Q9NQW8 809 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 GGA3Q9NZ52 723 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 DTLQ9NZJ0 730 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 SYNPO2Q9UMS6 1093 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 RABL2BQ9UNT1 228 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms