RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 ETS1P14921 441 aa14.29□□□□□ -0.12
SEC61B-201ENST00000223641 IVDP26440 423 aa14.29□□□□□ -0.12
SEC61B-201ENST00000223641 CD68P34810 354 aaPredicted RBP14.29□□□□□ -0.12
SEC61B-201ENST00000223641 RPL22P35268 128 aaKnown RBP14.29□□□□□ -0.12
SEC61B-201ENST00000223641 CTSOP43234 321 aaPredicted RBP14.29□□□□□ -0.12
SEC61B-201ENST00000223641 TNFRSF4P43489 277 aa14.29□□□□□ -0.12
SEC61B-201ENST00000223641 NUMBP49757 651 aa14.29□□□□□ -0.12
SEC61B-201ENST00000223641 SLC44A4Q53GD3 710 aa14.29□□□□□ -0.12
SEC61B-201ENST00000223641 TMEM196Q5HYL7 178 aa14.29□□□□□ -0.12
SEC61B-201ENST00000223641 C8orf74Q6P047 294 aa14.29□□□□□ -0.12
SEC61B-201ENST00000223641 LINGO4Q6UY18 593 aa14.29□□□□□ -0.12
SEC61B-201ENST00000223641 C4orf22Q6V702 233 aa14.29□□□□□ -0.12
SEC61B-201ENST00000223641 GSTA5Q7RTV2 222 aa14.29□□□□□ -0.12
SEC61B-201ENST00000223641 PRUNE1Q86TP1 453 aa14.29□□□□□ -0.12
SEC61B-201ENST00000223641 RNF135Q8IUD6 432 aa14.29□□□□□ -0.12
SEC61B-201ENST00000223641 KLHDC8BQ8IXV7 354 aa14.29□□□□□ -0.12
SEC61B-201ENST00000223641 SH2D3CQ8N5H7 860 aa14.29□□□□□ -0.12
SEC61B-201ENST00000223641 CCDC110Q8TBZ0 833 aa14.29□□□□□ -0.12
SEC61B-201ENST00000223641 NSMCE1Q8WV22 266 aa14.29□□□□□ -0.12
SEC61B-201ENST00000223641 SEC14L1Q92503 715 aa14.29□□□□□ -0.12
SEC61B-201ENST00000223641 EZH1Q92800 747 aaPredicted RBP14.29□□□□□ -0.12
SEC61B-201ENST00000223641 ISG20Q96AZ6 181 aaKnown RBP14.29□□□□□ -0.12
SEC61B-201ENST00000223641 RBM22Q9NW64 420 aaKnown RBP eCLIP14.29□□□□□ -0.12
SEC61B-201ENST00000223641 PAK5Q9P286 719 aa14.29□□□□□ -0.12
SEC61B-201ENST00000223641 HCN2Q9UL51 889 aa14.29□□□□□ -0.12
SEC61B-201ENST00000223641 ERVW-1Q9UQF0 538 aa14.29□□□□□ -0.12
SEC61B-201ENST00000223641 MYO18AQ92614 2054 aaKnown RBP14.29□□□□□ -0.12
SEC61B-201ENST00000223641 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.28□□□□□ -0.12
SEC61B-201ENST00000223641 K7EQS6 105 aa14.28□□□□□ -0.12
SEC61B-201ENST00000223641 MUSKO15146 869 aa14.28□□□□□ -0.12
SEC61B-201ENST00000223641 ZBTB24O43167 697 aaPredicted RBP14.28□□□□□ -0.12
SEC61B-201ENST00000223641 SMAD6O43541 496 aaKnown RBP14.28□□□□□ -0.12
SEC61B-201ENST00000223641 ATP9BO43861 1147 aa14.28□□□□□ -0.12
SEC61B-201ENST00000223641 ZNF821O75541 412 aaPredicted RBP14.28□□□□□ -0.12
SEC61B-201ENST00000223641 STK10O94804 968 aaKnown RBP14.28□□□□□ -0.12
SEC61B-201ENST00000223641 TMCC1O94876 653 aa14.28□□□□□ -0.12
SEC61B-201ENST00000223641 IFNB1P01574 187 aa14.28□□□□□ -0.12
SEC61B-201ENST00000223641 APODP05090 189 aa14.28□□□□□ -0.12
SEC61B-201ENST00000223641 HLA-DQB2P05538 268 aa14.28□□□□□ -0.12
SEC61B-201ENST00000223641 ZSCAN5DPP0CG00 497 aa14.28□□□□□ -0.12
SEC61B-201ENST00000223641 CR2P20023 1033 aa14.28□□□□□ -0.12
SEC61B-201ENST00000223641 MMP13P45452 471 aa14.28□□□□□ -0.12
SEC61B-201ENST00000223641 DRG2P55039 364 aaKnown RBP14.28□□□□□ -0.12
SEC61B-201ENST00000223641 KDSRQ06136 332 aa14.28□□□□□ -0.12
SEC61B-201ENST00000223641 NSUN2Q08J23 767 aaKnown RBP eCLIP14.28□□□□□ -0.12
SEC61B-201ENST00000223641 LEKR1Q6ZMV7 388 aa14.28□□□□□ -0.12
SEC61B-201ENST00000223641 NUDT18Q6ZVK8 323 aa14.28□□□□□ -0.12
SEC61B-201ENST00000223641 PID1Q7Z2X4 250 aa14.28□□□□□ -0.12
SEC61B-201ENST00000223641 SFTPA1Q8IWL2 248 aa14.28□□□□□ -0.12
SEC61B-201ENST00000223641 PGBD5Q8N414 524 aa14.28□□□□□ -0.12
SEC61B-201ENST00000223641 CCDC89Q8N998 374 aa14.28□□□□□ -0.12
SEC61B-201ENST00000223641 TSEN2Q8NCE0 465 aaKnown RBP14.28□□□□□ -0.12
SEC61B-201ENST00000223641 CCHCR1Q8TD31 782 aa14.28□□□□□ -0.12
SEC61B-201ENST00000223641 EXOC4Q96A65 974 aa14.28□□□□□ -0.12
SEC61B-201ENST00000223641 RPL10LQ96L21 214 aaKnown RBP14.28□□□□□ -0.12
SEC61B-201ENST00000223641 MGME1Q9BQP7 344 aa14.28□□□□□ -0.12
SEC61B-201ENST00000223641 ERP44Q9BS26 406 aa14.28□□□□□ -0.12
SEC61B-201ENST00000223641 CEP41Q9BYV8 373 aa14.28□□□□□ -0.12
SEC61B-201ENST00000223641 CEP44Q9C0F1 390 aa14.28□□□□□ -0.12
SEC61B-201ENST00000223641 WNT16Q9UBV4 365 aa14.28□□□□□ -0.12
SEC61B-201ENST00000223641 SEPT3Q9UH03 358 aa14.28□□□□□ -0.12
SEC61B-201ENST00000223641 DMGDHQ9UI17 866 aaKnown RBP14.28□□□□□ -0.12
SEC61B-201ENST00000223641 SLCO3A1Q9UIG8 710 aa14.28□□□□□ -0.12
SEC61B-201ENST00000223641 SLC25A13Q9UJS0 675 aa14.28□□□□□ -0.12
SEC61B-201ENST00000223641 TBC1D3BA6NDS4 549 aa14.27□□□□□ -0.13
SEC61B-201ENST00000223641 K7ERQ8 282 aa14.27□□□□□ -0.13
SEC61B-201ENST00000223641 HNRNPLP14866 589 aaKnown RBP eCLIP14.27□□□□□ -0.13
SEC61B-201ENST00000223641 DRD1P21728 446 aa14.27□□□□□ -0.13
SEC61B-201ENST00000223641 HSPA9P38646 679 aaKnown RBP14.27□□□□□ -0.13
SEC61B-201ENST00000223641 KIR2DL1P43626 348 aaPredicted RBP14.27□□□□□ -0.13
SEC61B-201ENST00000223641 STK19P49842 368 aaPredicted RBP14.27□□□□□ -0.13
SEC61B-201ENST00000223641 MRPS25P82663 173 aaKnown RBP14.27□□□□□ -0.13
SEC61B-201ENST00000223641 ENPP2Q13822 863 aa14.27□□□□□ -0.13
SEC61B-201ENST00000223641 PPP1R7Q15435 360 aa14.27□□□□□ -0.13
SEC61B-201ENST00000223641 MLF2Q15773 248 aaPredicted RBP14.27□□□□□ -0.13
SEC61B-201ENST00000223641 KCTD19Q17RG1 926 aaPredicted RBP14.27□□□□□ -0.13
SEC61B-201ENST00000223641 PARP6Q2NL67 630 aa14.27□□□□□ -0.13
SEC61B-201ENST00000223641 FAM182AQ5T1J6 154 aa14.27□□□□□ -0.13
SEC61B-201ENST00000223641 DUPD1Q68J44 220 aa14.27□□□□□ -0.13
SEC61B-201ENST00000223641 FSTL4Q6MZW2 842 aa14.27□□□□□ -0.13
SEC61B-201ENST00000223641 PLPP6Q8IY26 295 aa14.27□□□□□ -0.13
SEC61B-201ENST00000223641 UBALD2Q8IYN6 164 aa14.27□□□□□ -0.13
SEC61B-201ENST00000223641 BBS5Q8N3I7 341 aa14.27□□□□□ -0.13
SEC61B-201ENST00000223641 ATP11CQ8NB49 1132 aa14.27□□□□□ -0.13
SEC61B-201ENST00000223641 ARRDC2Q8TBH0 407 aa14.27□□□□□ -0.13
SEC61B-201ENST00000223641 KCNV2Q8TDN2 545 aa14.27□□□□□ -0.13
SEC61B-201ENST00000223641 USP33Q8TEY7 942 aa14.27□□□□□ -0.13
SEC61B-201ENST00000223641 FRS2Q8WU20 508 aa14.27□□□□□ -0.13
SEC61B-201ENST00000223641 CYB5D2Q8WUJ1 264 aa14.27□□□□□ -0.13
SEC61B-201ENST00000223641 SORCS1Q8WY21 1168 aa14.27□□□□□ -0.13
SEC61B-201ENST00000223641 TADA1Q96BN2 335 aa14.27□□□□□ -0.13
SEC61B-201ENST00000223641 AGAP3Q96P47 875 aa14.27□□□□□ -0.13
SEC61B-201ENST00000223641 FCRL5Q96RD9 977 aa14.27□□□□□ -0.13
SEC61B-201ENST00000223641 TRIM51Q9BSJ1 452 aa14.27□□□□□ -0.13
SEC61B-201ENST00000223641 CIPCQ9C0C6 399 aa14.27□□□□□ -0.13
SEC61B-201ENST00000223641 GBA3Q9H227 469 aa14.27□□□□□ -0.13
SEC61B-201ENST00000223641 GLOD4Q9HC38 313 aa14.27□□□□□ -0.13
SEC61B-201ENST00000223641 CD320Q9NPF0 282 aa14.27□□□□□ -0.13
SEC61B-201ENST00000223641 SEPT10Q9P0V9 454 aa14.27□□□□□ -0.13
SEC61B-201ENST00000223641 KLHL8Q9P2G9 620 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms