RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 PAPOLAP51003 745 aaKnown RBP12.93□□□□□ -0.34
LSM5-201ENST00000223084 CLCN6P51797 869 aa12.93□□□□□ -0.34
LSM5-201ENST00000223084 CDH6P55285 790 aa12.93□□□□□ -0.34
LSM5-201ENST00000223084 SERINC3Q13530 473 aa12.93□□□□□ -0.34
LSM5-201ENST00000223084 KRT81Q14533 505 aa12.93□□□□□ -0.34
LSM5-201ENST00000223084 SF3A2Q15428 464 aaKnown RBP12.93□□□□□ -0.34
LSM5-201ENST00000223084 TCEAL6Q6IPX3 200 aa12.93□□□□□ -0.34
LSM5-201ENST00000223084 DPY19L3Q6ZPD9 716 aa12.93□□□□□ -0.34
LSM5-201ENST00000223084 TMTC1Q8IUR5 882 aa12.93□□□□□ -0.34
LSM5-201ENST00000223084 ARHGAP12Q8IWW6 846 aa12.93□□□□□ -0.34
LSM5-201ENST00000223084 RHOT2Q8IXI1 618 aa12.93□□□□□ -0.34
LSM5-201ENST00000223084 HDDC3Q8N4P3 179 aa12.93□□□□□ -0.34
LSM5-201ENST00000223084 AADATQ8N5Z0 425 aa12.93□□□□□ -0.34
LSM5-201ENST00000223084 PIP4K2CQ8TBX8 421 aa12.93□□□□□ -0.34
LSM5-201ENST00000223084 TCEAL3Q969E4 200 aa12.93□□□□□ -0.34
LSM5-201ENST00000223084 ZNF419Q96HQ0 510 aaPredicted RBP12.93□□□□□ -0.34
LSM5-201ENST00000223084 CSPG4P5Q96PW8 444 aa12.93□□□□□ -0.34
LSM5-201ENST00000223084 OMDQ99983 421 aa12.93□□□□□ -0.34
LSM5-201ENST00000223084 TM6SF2Q9BZW4 377 aa12.93□□□□□ -0.34
LSM5-201ENST00000223084 NEUROG2Q9H2A3 272 aa12.93□□□□□ -0.34
LSM5-201ENST00000223084 C6orf106Q9H6K1 298 aaPredicted RBP12.93□□□□□ -0.34
LSM5-201ENST00000223084 PPM1HQ9ULR3 514 aa12.93□□□□□ -0.34
LSM5-201ENST00000223084 HYOU1Q9Y4L1 999 aa12.93□□□□□ -0.34
LSM5-201ENST00000223084 PCDHGA5Q9Y5G8 931 aa12.93□□□□□ -0.34
LSM5-201ENST00000223084 CACNA1BQ00975 2339 aa12.93□□□□□ -0.34
LSM5-201ENST00000223084 RCCD1A6NED2 376 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 FAM47DPA6NHR8 397 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 PATE3B3GLJ2 98 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 J3KR12 359 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 DFFAO00273 331 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 MTA2O94776 668 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 NDUFA10O95299 355 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 ADH1BP00325 375 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 C5AR1P21730 350 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 IL4RP24394 825 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 CHRNA3P32297 505 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 MAN1A1P33908 653 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 RECQLP46063 649 aaPredicted RBP12.92□□□□□ -0.34
LSM5-201ENST00000223084 NOP2P46087 812 aaKnown RBP12.92□□□□□ -0.34
LSM5-201ENST00000223084 ARSEP51690 589 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 ZNF135P52742 658 aaPredicted RBP12.92□□□□□ -0.34
LSM5-201ENST00000223084 NDST2P52849 883 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 SPA17Q15506 151 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 CSRP2Q16527 193 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 PARP15Q460N3 678 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 CARD16Q5EG05 197 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 ARSIQ5FYB1 569 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 SPDYCQ5MJ68 293 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 PLA2G2CQ5R387 149 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 ATXN7L2Q5T6C5 722 aaPredicted RBP12.92□□□□□ -0.34
LSM5-201ENST00000223084 AFMIDQ63HM1 303 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.92□□□□□ -0.34
LSM5-201ENST00000223084 ARHGAP36Q6ZRI8 547 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 PRR23CQ6ZRP0 262 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 USP30Q70CQ3 517 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 DSG4Q86SJ6 1040 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 TMEM139Q8IV31 216 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 PCDH20Q8N6Y1 951 aaKnown RBP12.92□□□□□ -0.34
LSM5-201ENST00000223084 OR6K2Q8NGY2 324 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 GRIN3AQ8TCU5 1115 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 TSC1Q92574 1164 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 CEP44Q9C0F1 390 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 BTBD1Q9H0C5 482 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 IMPACTQ9P2X3 320 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 SCML1Q9UN30 329 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 NCKAP1Q9Y2A7 1128 aa12.92□□□□□ -0.34
LSM5-201ENST00000223084 REXO2Q9Y3B8 237 aaKnown RBP12.92□□□□□ -0.34
LSM5-201ENST00000223084 FARP1Q9Y4F1 1045 aaPredicted RBP12.92□□□□□ -0.34
LSM5-201ENST00000223084 EPN1Q9Y6I3 576 aaPredicted RBP12.92□□□□□ -0.34
LSM5-201ENST00000223084 KNL1Q8NG31 2342 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 CEP250Q9BV73 2442 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 ARHGAP42A6NI28 874 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 METTL12A8MUP2 240 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 MEI4A8MW99 385 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 ALOX15BO15296 676 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 GDF9O60383 454 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 LRP3O75074 770 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 TMCC1O94876 653 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 SEMA4FO95754 770 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 ZNF806P0C7X5 589 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 TNNT1P13805 278 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 GKP32189 559 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 DRD3P35462 400 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 ARHGAP25P42331 645 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 CCNHP51946 323 aaPredicted RBP12.91□□□□□ -0.34
LSM5-201ENST00000223084 DPYSL3Q14195 570 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 CYTH1Q15438 398 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 ZFYVE27Q5T4F4 411 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 DCAF12L1Q5VU92 463 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 FAM46CQ5VWP2 391 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 SYT12Q8IV01 421 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 RGL4Q8IZJ4 473 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 RYBPQ8N488 228 aaPredicted RBP12.91□□□□□ -0.34
LSM5-201ENST00000223084 KCTD6Q8NC69 237 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 ACRBPQ8NEB7 543 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 FAM71BQ8TC56 605 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 SNX19Q92543 992 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 ARRDC3Q96B67 414 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 CCDC114Q96M63 670 aa12.91□□□□□ -0.34
LSM5-201ENST00000223084 BAG1Q99933 345 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms