RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 PAWRQ96IZ0 340 aaKnown RBP11.67□□□□□ -0.54
NOD1-201ENST00000222823 BCAS3Q9H6U6 928 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 CNGB3Q9NQW8 809 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 STARD13Q9Y3M8 1113 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 PTCH2Q9Y6C5 1203 aa11.67□□□□□ -0.54
NOD1-201ENST00000222823 PMM2O15305 246 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 RGS5O15539 181 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 ZBTB14O43829 449 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 CCDC166P0CW27 439 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 FRG1Q14331 258 aaKnown RBP11.66□□□□□ -0.54
NOD1-201ENST00000222823 CRYMQ14894 314 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 PLCL1Q15111 1095 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 SAMD4BQ5PRF9 694 aaKnown RBP11.66□□□□□ -0.54
NOD1-201ENST00000222823 CYP2R1Q6VVX0 501 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 LBX2Q6XYB7 198 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 LRRC49Q8IUZ0 686 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 APLFQ8IW19 511 aaPredicted RBP11.66□□□□□ -0.54
NOD1-201ENST00000222823 JOSD2Q8TAC2 188 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 SPPL2AQ8TCT8 520 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 HELQQ8TDG4 1101 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 FIG4Q92562 907 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 MMADHCQ9H3L0 296 aaPredicted RBP11.66□□□□□ -0.54
NOD1-201ENST00000222823 CATSPERZQ9NTU4 200 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 ZMYM5Q9UJ78 669 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 MYH14Q7Z406 1995 aaKnown RBP11.66□□□□□ -0.54
NOD1-201ENST00000222823 SF3B1O75533 1304 aaKnown RBP eCLIP11.66□□□□□ -0.544e-6■■■■■ 120.3
NOD1-201ENST00000222823 DOCK2Q92608 1830 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 LDLRP01130 860 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 DARSP14868 501 aaKnown RBP11.66□□□□□ -0.54
NOD1-201ENST00000222823 ALDH9A1P49189 494 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 PSEN1P49768 467 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 BST1Q10588 318 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 PFKFB4Q16877 469 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 NOMO2Q5JPE7 1267 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 TPGS1Q6ZTW0 290 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 EXOC3L1Q86VI1 746 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 DAW1Q8N136 415 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 SERAC1Q96JX3 654 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 TMEM79Q9BSE2 394 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 ALG9Q9H6U8 611 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 OPTCQ9UBM4 332 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 LRCH1Q9Y2L9 728 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 GRIN2DO15399 1336 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 C15orf38-AP3S2A0A0A6YYH1 394 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 ALOX15BO15296 676 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 B4GALT4O60513 344 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 SMNDC1O75940 238 aaKnown RBP eCLIP11.66□□□□□ -0.54
NOD1-201ENST00000222823 LTA4HP09960 611 aaKnown RBP11.66□□□□□ -0.54
NOD1-201ENST00000222823 HDCP19113 662 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 CAPZA2P47755 286 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 TGM3Q08188 693 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 EIF2B5Q13144 721 aaKnown RBP11.66□□□□□ -0.54
NOD1-201ENST00000222823 PTPN20Q4JDL3 420 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 ARPINQ7Z6K5 226 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 OSCP1Q8WVF1 389 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 MYLPFQ96A32 169 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 ZFP42Q96MM3 310 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 UROC1Q96N76 676 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 ANKRD27Q96NW4 1050 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 SEMA3CQ99985 751 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 ZYG11BQ9C0D3 744 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 ARL15Q9NXU5 204 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 NR2E1Q9Y466 385 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 MYH1P12882 1939 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 A0A087X1B8 175 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 CCDC154A6NI56 674 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 SCAMP3O14828 347 aaKnown RBP11.66□□□□□ -0.54
NOD1-201ENST00000222823 XYLBO75191 536 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 AMHP03971 560 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 PPP2R1BP30154 601 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 CD52P31358 61 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 PIK3CGP48736 1102 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 MRPS5P82675 430 aaKnown RBP11.66□□□□□ -0.54
NOD1-201ENST00000222823 PDK4Q16654 411 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 PPM1LQ5SGD2 360 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 LLGL2Q6P1M3 1020 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 CYP4Z1Q86W10 505 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 PRCCQ92733 491 aaPredicted RBP11.66□□□□□ -0.54
NOD1-201ENST00000222823 MLPHQ9BV36 600 aaPredicted RBP11.66□□□□□ -0.54
NOD1-201ENST00000222823 NXF3Q9H4D5 531 aaKnown RBP11.66□□□□□ -0.54
NOD1-201ENST00000222823 IL1RAPL1Q9NZN1 696 aa11.66□□□□□ -0.54
NOD1-201ENST00000222823 WRAP73Q9P2S5 460 aaPredicted RBP11.66□□□□□ -0.54
NOD1-201ENST00000222823 NOCTQ9UK39 431 aaKnown RBP11.66□□□□□ -0.54
NOD1-201ENST00000222823 FAM237BA0A1B0GVD1 139 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 CLDN5O00501 218 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 PAX3P23760 479 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 ACSM2AQ08AH3 577 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 DUSP28Q4G0W2 176 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 TREML2Q5T2D2 321 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 ACSM2BQ68CK6 577 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 C10orf53Q8N6V4 93 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 ACMSDQ8TDX5 336 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 STK32AQ8WU08 396 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 RNF145Q96MT1 663 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 ZMAT2Q96NC0 199 aaKnown RBP11.65□□□□□ -0.54
NOD1-201ENST00000222823 ROGDIQ9GZN7 287 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 FAM105AQ9NUU6 356 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 COL20A1Q9P218 1284 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 LIMD1Q9UGP4 676 aa11.65□□□□□ -0.54
NOD1-201ENST00000222823 ZNF112Q9UJU3 913 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms