RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 EFCAB3Q8N7B9 438 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 LINC00469Q8N7U9 141 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 BANPQ8N9N5 519 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 FEZF2Q8TBJ5 459 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 GRK7Q8WTQ7 553 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 SLC29A1Q99808 456 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 CLPBQ9H078 707 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 XYLT2Q9H1B5 865 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 MROH8Q9H579 483 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 VPS37BQ9H9H4 285 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 PPCSQ9HAB8 311 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 PARVAQ9NVD7 372 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 GMIPQ9P107 970 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 TXNDC16Q9P2K2 825 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 USTQ9Y2C2 406 aa13.85□□□□□ -0.19
GABPB1-201ENST00000220429 WEE2P0C1S8 567 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 IQCF3P0C7M6 154 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 ZNF182P17025 639 aaPredicted RBP13.84□□□□□ -0.19
GABPB1-201ENST00000220429 PRKACAP17612 351 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 MAN1A1P33908 653 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 HPCAL1P37235 193 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 SLC26A2P50443 739 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 MBTD1Q05BQ5 628 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 SURF1Q15526 300 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 IZUMO3Q5VZ72 239 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 SCARA5Q6ZMJ2 495 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 KATNAL2Q8IYT4 538 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 TP53INP1Q96A56 240 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 TTC17Q96AE7 1141 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 CDK5RAP1Q96SZ6 601 aaKnown RBP13.84□□□□□ -0.19
GABPB1-201ENST00000220429 RNPEPQ9H4A4 650 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 COPS7BQ9H9Q2 264 aaPredicted RBP13.84□□□□□ -0.19
GABPB1-201ENST00000220429 NEK6Q9HC98 313 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 SEPT10Q9P0V9 454 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 ZSWIM8A7E2V4 1837 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 HBP1O60381 514 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 MYCP01106 439 aaPredicted RBP13.84□□□□□ -0.19
GABPB1-201ENST00000220429 ATP5BP06576 529 aaKnown RBP13.84□□□□□ -0.19
GABPB1-201ENST00000220429 MCF2P10911 925 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 TGM1P22735 817 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 ASPAP45381 313 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 STX1BP61266 288 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 B2MP61769 119 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 C19orf57Q0VDD7 668 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 TRPC3Q13507 836 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 TTLL4Q14679 1199 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 INAVAQ3KP66 663 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 NXNQ6DKJ4 435 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 AGMOQ6ZNB7 445 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 DSG4Q86SJ6 1040 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 GLRX5Q86SX6 157 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 CARM1Q86X55 608 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 ARID3BQ8IVW6 561 aaPredicted RBP13.84□□□□□ -0.19
GABPB1-201ENST00000220429 TMEM192Q8IY95 271 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 DEFB107AQ8IZN7 70 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 ZUFSPQ96AP4 578 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 ALKBH8Q96BT7 664 aaKnown RBP13.84□□□□□ -0.19
GABPB1-201ENST00000220429 UQCC2Q9BRT2 126 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 SORCS3Q9UPU3 1222 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 TCRBV5S1A1TA0A578 114 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 TMEM191BP0C7N4 346 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 DHRS4L1P0CG22 281 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 CYP2C8P10632 490 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 TCF4P15884 667 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 TTKP33981 857 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 GJC1P36383 396 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 AQP5P55064 265 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 EIF3EP60228 445 aaKnown RBP13.84□□□□□ -0.19
GABPB1-201ENST00000220429 ZNF252P-AS1Q0IIN9 211 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 TFDP1Q14186 410 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 ZNF699Q32M78 642 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 C9orf131Q5VYM1 1079 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 TMEM130Q8N3G9 435 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 ZCCHC9Q8N567 271 aaKnown RBP13.84□□□□□ -0.19
GABPB1-201ENST00000220429 WDTC1Q8N5D0 677 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 TFAP2BQ92481 460 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 ZNF347Q96SE7 839 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 CDT1Q9H211 546 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 DNMT3BQ9UBC3 853 aaKnown RBP13.84□□□□□ -0.19
GABPB1-201ENST00000220429 KLQ9UEF7 1012 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 STRIP2Q9ULQ0 834 aa13.84□□□□□ -0.19
GABPB1-201ENST00000220429 TMEM191CA6NGB0 347 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 C22orf31O95567 290 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 ERBB2P04626 1255 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 CXCL8P10145 99 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 NFATC3Q12968 1075 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 TMEM26Q6ZUK4 368 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 GALNT7Q86SF2 657 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 CCDC28AQ8IWP9 274 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 FIBCD1Q8N539 461 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 NPLOC4Q8TAT6 608 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 FEM1CQ96JP0 617 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 YME1L1Q96TA2 773 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 KLF6Q99612 283 aaPredicted RBP13.83□□□□□ -0.2
GABPB1-201ENST00000220429 FAM118BQ9BPY3 351 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 FOXP3Q9BZS1 431 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 THG1LQ9NWX6 298 aaKnown RBP13.83□□□□□ -0.2
GABPB1-201ENST00000220429 ABI2Q9NYB9 513 aaPredicted RBP13.83□□□□□ -0.2
GABPB1-201ENST00000220429 STMN3Q9NZ72 180 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 ATPIF1Q9UII2 106 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms