RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 HAS1Q92839 578 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 KAT5Q92993 513 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 SLC4A9Q96Q91 983 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 RNPEPQ9H4A4 650 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 BATF3Q9NR55 127 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 SLC27A6Q9Y2P4 619 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 ATP9AO75110 1047 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 ATP4AP20648 1035 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 KELP23276 732 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 FAM180AQ6UWF9 173 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 ACTRT2Q8TDY3 377 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.18■□□□□ 0.66
SMPD3-201ENST00000219334 ADAM28Q9UKQ2 775 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 PHGDHO43175 533 aaKnown RBP19.18■□□□□ 0.66
SMPD3-201ENST00000219334 BUD23O43709 281 aaKnown RBP19.18■□□□□ 0.66
SMPD3-201ENST00000219334 BRCC3P46736 316 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 SULT2A1Q06520 285 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 DEFB107AQ8IZN7 70 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 EFCAB3Q8N7B9 438 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 ZFP28Q8NHY6 868 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 WDR36Q8NI36 951 aaKnown RBP19.18■□□□□ 0.66
SMPD3-201ENST00000219334 MTFMTQ96DP5 389 aaKnown RBP19.18■□□□□ 0.66
SMPD3-201ENST00000219334 CAPNS2Q96L46 248 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 DNAJC18Q9H819 358 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 NINJ2Q9NZG7 142 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 TMCO1Q9UM00 188 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 PREX1Q8TCU6 1659 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 MRASO14807 208 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 OPLAHO14841 1288 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 ERN1O75460 977 aaKnown RBP19.18■□□□□ 0.66
SMPD3-201ENST00000219334 CES1P23141 567 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 RTP1P59025 263 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 CEP78Q5JTW2 689 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 EPHX4Q8IUS5 362 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 EID3Q8N140 333 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 FAM45AQ8TCE6 357 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 SEMA4BQ9NPR2 832 aaPredicted RBP19.18■□□□□ 0.66
SMPD3-201ENST00000219334 CNGB3Q9NQW8 809 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 C15orf38-AP3S2A0A0A6YYH1 394 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 BTBD19C9JJ37 291 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 B4GALT5O43286 388 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 EPN2O95208 641 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 ATG7O95352 703 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 LTA4HP09960 611 aaKnown RBP19.18■□□□□ 0.66
SMPD3-201ENST00000219334 SLC35G4P0C7Q5 338 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 SERPINB1P30740 379 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 ATAT1Q5SQI0 421 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 LRRC38Q5VT99 294 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 ARPINQ7Z6K5 226 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 CD99L2Q8TCZ2 262 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 CLIP3Q96DZ5 547 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 BDH2Q9BUT1 245 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 RSPH9Q9H1X1 276 aaPredicted RBP19.18■□□□□ 0.66
SMPD3-201ENST00000219334 LIMD1Q9UGP4 676 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 ZNF232Q9UNY5 417 aa19.18■□□□□ 0.66
SMPD3-201ENST00000219334 WTIPA6NIX2 430 aaPredicted RBP19.17■□□□□ 0.66
SMPD3-201ENST00000219334 H3BN98 237 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 MAGEC1O60732 1142 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 ETS1P14921 441 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 IL5RAQ01344 420 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 GPR141Q7Z602 305 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 FAM35AQ86V20 835 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 DSELQ8IZU8 1212 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 MAB21L3Q8N8X9 362 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 L2HGDHQ9H9P8 463 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 IL1RAPL1Q9NZN1 696 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 KIAA1522Q9P206 1035 aaPredicted RBP19.17■□□□□ 0.66
SMPD3-201ENST00000219334 A0A087X0B3 334 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 CHADO15335 359 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 HSMCR30P0CW71 290 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 ZBTB48P10074 688 aaPredicted RBP19.17■□□□□ 0.66
SMPD3-201ENST00000219334 ZNF24P17028 368 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 TALDO1P37837 337 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 FAAP100Q0VG06 881 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 PPIGQ13427 754 aaKnown RBP eCLIP19.17■□□□□ 0.66
SMPD3-201ENST00000219334 FOXR1Q6PIV2 292 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 CPA6Q8N4T0 437 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 FBXO22Q8NEZ5 403 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 SLC40A1Q9NP59 571 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 SALL3Q9BXA9 1300 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 CHURC1-FNTBB4DL54 471 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 GPR158Q5T848 1215 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 SLC24A5Q71RS6 500 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 SMG7Q92540 1137 aaKnown RBP19.17■□□□□ 0.66
SMPD3-201ENST00000219334 RNFT2Q96EX2 444 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 SIKE1Q9BRV8 207 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 SLC39A8Q9C0K1 460 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 AGO1Q9UL18 857 aaKnown RBP19.17■□□□□ 0.66
SMPD3-201ENST00000219334 ISM1B1AKI9 464 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 APODP05090 189 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 MMP3P08254 477 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 ITGB5P18084 799 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 EEF1DP3Q658K8 133 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 FAM20CQ8IXL6 584 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 ALG9Q9H6U8 611 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 BPIFA1Q9NP55 256 aa19.17■□□□□ 0.66
SMPD3-201ENST00000219334 TBC1D3DA0A087WVF3 549 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 TBC1D3IA0A087WXS9 549 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 TBC1D3EA0A087X179 549 aa19.16■□□□□ 0.66
SMPD3-201ENST00000219334 TBC1D3KA0A087X1G2 549 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms