RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 MAPKAPK2P49137 400 aa30.17■■■□□ 2.42
PABPN1-201ENST00000216727 MARC1Q5VT66 337 aa30.17■■■□□ 2.42
PABPN1-201ENST00000216727 KIAA1841Q6NSI8 718 aa30.17■■■□□ 2.42
PABPN1-201ENST00000216727 NUDCD3Q8IVD9 361 aa30.17■■■□□ 2.42
PABPN1-201ENST00000216727 E2F7Q96AV8 911 aa30.17■■■□□ 2.42
PABPN1-201ENST00000216727 VWCEQ96DN2 955 aa30.17■■■□□ 2.42
PABPN1-201ENST00000216727 IMP4Q96G21 291 aaKnown RBP30.17■■■□□ 2.42
PABPN1-201ENST00000216727 FSD1LQ9BXM9 530 aa30.17■■■□□ 2.42
PABPN1-201ENST00000216727 J3KR12 359 aa30.16■■■□□ 2.42
PABPN1-201ENST00000216727 TYK2P29597 1187 aa30.16■■■□□ 2.42
PABPN1-201ENST00000216727 YBEYP58557 167 aaPredicted RBP30.16■■■□□ 2.42
PABPN1-201ENST00000216727 SMAD1Q15797 465 aaKnown RBP30.16■■■□□ 2.42
PABPN1-201ENST00000216727 C5orf22Q49AR2 442 aa30.16■■■□□ 2.42
PABPN1-201ENST00000216727 NADSYN1Q6IA69 706 aa30.16■■■□□ 2.42
PABPN1-201ENST00000216727 KLHDC10Q6PID8 442 aa30.16■■■□□ 2.42
PABPN1-201ENST00000216727 C7orf26Q96N11 449 aa30.16■■■□□ 2.42
PABPN1-201ENST00000216727 LRRC37BQ96QE4 947 aa30.16■■■□□ 2.42
PABPN1-201ENST00000216727 CLSTN3Q9BQT9 956 aa30.16■■■□□ 2.42
PABPN1-201ENST00000216727 MECRQ9BV79 373 aa30.16■■■□□ 2.42
PABPN1-201ENST00000216727 SP110Q9HB58 689 aa30.16■■■□□ 2.42
PABPN1-201ENST00000216727 VPS45Q9NRW7 570 aa30.16■■■□□ 2.42
PABPN1-201ENST00000216727 CHKBQ9Y259 395 aa30.16■■■□□ 2.42
PABPN1-201ENST00000216727 COL4A6Q14031 1691 aa30.16■■■□□ 2.42
PABPN1-201ENST00000216727 RAMP2O60895 175 aa30.15■■■□□ 2.42
PABPN1-201ENST00000216727 PMPCBO75439 489 aa30.15■■■□□ 2.42
PABPN1-201ENST00000216727 KDELC1Q6UW63 502 aa30.15■■■□□ 2.42
PABPN1-201ENST00000216727 DCLK2Q8N568 766 aa30.15■■■□□ 2.42
PABPN1-201ENST00000216727 ZNF778Q96MU6 729 aa30.15■■■□□ 2.42
PABPN1-201ENST00000216727 RETREG1Q9H6L5 497 aa30.15■■■□□ 2.42
PABPN1-201ENST00000216727 ARNT2Q9HBZ2 717 aa30.15■■■□□ 2.42
PABPN1-201ENST00000216727 TIMM44O43615 452 aa30.15■■■□□ 2.42
PABPN1-201ENST00000216727 ABLIM3O94929 683 aa30.15■■■□□ 2.42
PABPN1-201ENST00000216727 SOD2P04179 222 aa30.15■■■□□ 2.42
PABPN1-201ENST00000216727 TACR2P21452 398 aa30.15■■■□□ 2.42
PABPN1-201ENST00000216727 RFC2P35250 354 aa30.15■■■□□ 2.42
PABPN1-201ENST00000216727 SERPINB8P50452 374 aa30.15■■■□□ 2.42
PABPN1-201ENST00000216727 POLD3Q15054 466 aaPredicted RBP30.15■■■□□ 2.42
PABPN1-201ENST00000216727 FSTL4Q6MZW2 842 aa30.15■■■□□ 2.42
PABPN1-201ENST00000216727 PPHLN1Q8NEY8 458 aaKnown RBP30.15■■■□□ 2.42
PABPN1-201ENST00000216727 ZNF461Q8TAF7 563 aa30.15■■■□□ 2.42
PABPN1-201ENST00000216727 EMCNQ9ULC0 261 aa30.15■■■□□ 2.42
PABPN1-201ENST00000216727 TOP3BO95985 862 aaKnown RBP30.14■■■□□ 2.42
PABPN1-201ENST00000216727 SKIV2L2P42285 1042 aaKnown RBP30.14■■■□□ 2.42
PABPN1-201ENST00000216727 IL10RBQ08334 325 aa30.14■■■□□ 2.42
PABPN1-201ENST00000216727 SLC10A7Q0GE19 358 aa30.14■■■□□ 2.42
PABPN1-201ENST00000216727 OVGP1Q12889 678 aa30.14■■■□□ 2.42
PABPN1-201ENST00000216727 NSMCE1Q8WV22 266 aa30.14■■■□□ 2.42
PABPN1-201ENST00000216727 PSMG2Q969U7 264 aa30.14■■■□□ 2.42
PABPN1-201ENST00000216727 SNX15Q9NRS6 342 aa30.14■■■□□ 2.42
PABPN1-201ENST00000216727 IARS2Q9NSE4 1012 aaKnown RBP30.14■■■□□ 2.42
PABPN1-201ENST00000216727 TCAF1Q9Y4C2 921 aa30.14■■■□□ 2.42
PABPN1-201ENST00000216727 ZNF840PA6NDX5 716 aa30.13■■■□□ 2.41
PABPN1-201ENST00000216727 GSRP00390 522 aa30.13■■■□□ 2.41
PABPN1-201ENST00000216727 KCNQ1P51787 676 aa30.13■■■□□ 2.41
PABPN1-201ENST00000216727 WNT3AP56704 352 aa30.13■■■□□ 2.41
PABPN1-201ENST00000216727 POU6F1Q14863 301 aa30.13■■■□□ 2.41
PABPN1-201ENST00000216727 SPDYAQ5MJ70 313 aa30.13■■■□□ 2.41
PABPN1-201ENST00000216727 N4BP2L1Q5TBK1 243 aaPredicted RBP30.13■■■□□ 2.41
PABPN1-201ENST00000216727 TPGS2Q68CL5 300 aa30.13■■■□□ 2.41
PABPN1-201ENST00000216727 TOP1MTQ969P6 601 aa30.13■■■□□ 2.41
PABPN1-201ENST00000216727 ZNF512Q96ME7 567 aaPredicted RBP30.13■■■□□ 2.41
PABPN1-201ENST00000216727 ATP13A1Q9HD20 1204 aa30.13■■■□□ 2.41
PABPN1-201ENST00000216727 NT5MQ9NPB1 228 aa30.13■■■□□ 2.41
PABPN1-201ENST00000216727 PLIN3O60664 434 aa30.13■■■□□ 2.41
PABPN1-201ENST00000216727 HADHAP40939 763 aa30.13■■■□□ 2.41
PABPN1-201ENST00000216727 NCALDP61601 193 aa30.13■■■□□ 2.41
PABPN1-201ENST00000216727 TMPRSS15P98073 1019 aa30.13■■■□□ 2.41
PABPN1-201ENST00000216727 BST1Q10588 318 aa30.13■■■□□ 2.41
PABPN1-201ENST00000216727 SERINC3Q13530 473 aa30.13■■■□□ 2.41
PABPN1-201ENST00000216727 CHI3L2Q15782 390 aa30.13■■■□□ 2.41
PABPN1-201ENST00000216727 NLRP9Q7RTR0 991 aa30.13■■■□□ 2.41
PABPN1-201ENST00000216727 ZNF784Q8NCA9 323 aaPredicted RBP30.13■■■□□ 2.41
PABPN1-201ENST00000216727 PABPC5Q96DU9 382 aaKnown RBP30.13■■■□□ 2.41
PABPN1-201ENST00000216727 ECT2Q9H8V3 914 aa30.13■■■□□ 2.41
PABPN1-201ENST00000216727 F5H5T6 163 aa30.12■■■□□ 2.41
PABPN1-201ENST00000216727 SEC24AO95486 1093 aa30.12■■■□□ 2.41
PABPN1-201ENST00000216727 HMGA1P17096 107 aaKnown RBP30.12■■■□□ 2.41
PABPN1-201ENST00000216727 OR1E1P30953 314 aa30.12■■■□□ 2.41
PABPN1-201ENST00000216727 CNTN4Q8IWV2 1026 aa30.12■■■□□ 2.41
PABPN1-201ENST00000216727 RFWD2Q8NHY2 731 aa30.12■■■□□ 2.41
PABPN1-201ENST00000216727 ZNF689Q96CS4 500 aaPredicted RBP30.12■■■□□ 2.41
PABPN1-201ENST00000216727 MYRFLQ96LU7 910 aa30.12■■■□□ 2.41
PABPN1-201ENST00000216727 BEGAINQ9BUH8 593 aa30.12■■■□□ 2.41
PABPN1-201ENST00000216727 MYLK2Q9H1R3 596 aa30.12■■■□□ 2.41
PABPN1-201ENST00000216727 CFAP73A6NFT4 308 aa30.12■■■□□ 2.41
PABPN1-201ENST00000216727 ACSL4O60488 711 aa30.12■■■□□ 2.41
PABPN1-201ENST00000216727 RASSF9O75901 435 aa30.12■■■□□ 2.41
PABPN1-201ENST00000216727 DSG1Q02413 1049 aa30.12■■■□□ 2.41
PABPN1-201ENST00000216727 HECTD3Q5T447 861 aa30.12■■■□□ 2.41
PABPN1-201ENST00000216727 ERP27Q96DN0 273 aa30.12■■■□□ 2.41
PABPN1-201ENST00000216727 MYEOVQ96EZ4 313 aa30.12■■■□□ 2.41
PABPN1-201ENST00000216727 KLHL5Q96PQ7 755 aa30.12■■■□□ 2.41
PABPN1-201ENST00000216727 TMEM39AQ9NV64 488 aa30.12■■■□□ 2.41
PABPN1-201ENST00000216727 SNNO75324 88 aaPredicted RBP30.11■■■□□ 2.41
PABPN1-201ENST00000216727 MPOP05164 745 aa30.11■■■□□ 2.41
PABPN1-201ENST00000216727 DLDP09622 509 aaKnown RBP30.11■■■□□ 2.41
PABPN1-201ENST00000216727 OCRLQ01968 901 aa30.11■■■□□ 2.41
PABPN1-201ENST00000216727 TTC31Q49AM3 519 aaPredicted RBP30.11■■■□□ 2.41
PABPN1-201ENST00000216727 PPM1JQ5JR12 505 aa30.11■■■□□ 2.41
PABPN1-201ENST00000216727 CIR1Q86X95 450 aaPredicted RBP30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms