RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 ADSSP30520 456 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 FNDC3BQ53EP0 1204 aaKnown RBP14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 BHMG1C9JSJ3 638 aaPredicted RBP14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 SERPINF2P08697 491 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 RXRBP28702 533 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 PSME3P61289 254 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 FAPQ12884 760 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 ZNF549Q6P9A3 640 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 TTLL2Q9BWV7 592 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 MED28Q9H204 178 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 CYP2F1P24903 491 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 FMO4P31512 558 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 KCNF1Q9H3M0 494 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 PHF24Q9UPV7 400 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 GYPCP04921 128 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 ZNF7P17097 686 aaPredicted RBP14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 PFKFB4Q16877 469 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 TNFAIP8L3Q5GJ75 292 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 SYNE4Q8N205 404 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 ZNF433Q8N7K0 673 aaPredicted RBP14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 CKAP2Q8WWK9 683 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 PHF20Q9BVI0 1012 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 CEP41Q9BYV8 373 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 RBM22Q9NW64 420 aaKnown RBP eCLIP14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 TBX20Q9UMR3 447 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 ST3GAL5Q9UNP4 418 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 MAPKBP1O60336 1514 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 FAM240BA0A1B0GVZ2 78 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 A0A1W2PQJ5 194 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 MRASO14807 208 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 ECHS1P30084 290 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 MECP2P51608 486 aaKnown RBP14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 AP2S1P53680 142 aaPredicted RBP14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 WDR59Q6PJI9 974 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 RNF180Q86T96 592 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 CHST4Q8NCG5 386 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 TSEN15Q8WW01 171 aaKnown RBP14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 CATSPERZQ9NTU4 200 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 TTC34A8MYJ7 566 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 TMEM253P0C7T8 217 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 FDX1P10109 184 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 FOSL1P15407 271 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 MSR1P21757 451 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 ACAP2Q15057 778 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 TTC7BQ86TV6 843 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 RGL4Q8IZJ4 473 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 ZNF563Q8TA94 476 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 DNAJA4Q8WW22 397 aaPredicted RBP14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 INTS10Q9NVR2 710 aaKnown RBP14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 RNF181Q9P0P0 153 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 CORO2BQ9UQ03 480 aa14.78□□□□□ -0.04
SPTLC2-201ENST00000216484 GATBO75879 557 aaKnown RBP14.77□□□□□ -0.04
SPTLC2-201ENST00000216484 TCF7P36402 384 aaPredicted RBP14.77□□□□□ -0.04
SPTLC2-201ENST00000216484 DEFA5Q01523 94 aa14.77□□□□□ -0.04
SPTLC2-201ENST00000216484 BMPR2Q13873 1038 aa14.77□□□□□ -0.04
SPTLC2-201ENST00000216484 SAMD4AQ9UPU9 718 aaKnown RBP14.77□□□□□ -0.04
SPTLC2-201ENST00000216484 RPH3AQ9Y2J0 694 aaPredicted RBP14.77□□□□□ -0.04
SPTLC2-201ENST00000216484 SLC12A8A0AV02 714 aa14.77□□□□□ -0.04
SPTLC2-201ENST00000216484 AMD1P17707 334 aa14.77□□□□□ -0.04
SPTLC2-201ENST00000216484 KLRC1P26715 233 aa14.77□□□□□ -0.04
SPTLC2-201ENST00000216484 CYP4F8P98187 520 aa14.77□□□□□ -0.04
SPTLC2-201ENST00000216484 INSCQ1MX18 579 aa14.77□□□□□ -0.04
SPTLC2-201ENST00000216484 LPCAT1Q8NF37 534 aa14.77□□□□□ -0.04
SPTLC2-201ENST00000216484 FCRL4Q96PJ5 515 aa14.77□□□□□ -0.04
SPTLC2-201ENST00000216484 TOR3AQ9H497 397 aa14.77□□□□□ -0.04
SPTLC2-201ENST00000216484 ZFP14Q9HCL3 533 aa14.77□□□□□ -0.04
SPTLC2-201ENST00000216484 CPDO75976 1380 aa14.77□□□□□ -0.04
SPTLC2-201ENST00000216484 ATF6P18850 670 aa14.77□□□□□ -0.04
SPTLC2-201ENST00000216484 S100A12P80511 92 aa14.77□□□□□ -0.04
SPTLC2-201ENST00000216484 MADCAM1Q13477 382 aa14.77□□□□□ -0.04
SPTLC2-201ENST00000216484 TYSND1Q2T9J0 566 aa14.77□□□□□ -0.04
SPTLC2-201ENST00000216484 SPANXN3Q5MJ09 141 aa14.77□□□□□ -0.04
SPTLC2-201ENST00000216484 TCP10LQ8TDR4 215 aa14.77□□□□□ -0.04
SPTLC2-201ENST00000216484 DPF2Q92785 391 aa14.77□□□□□ -0.04
SPTLC2-201ENST00000216484 RNF31Q96EP0 1072 aa14.77□□□□□ -0.04
SPTLC2-201ENST00000216484 DCP1AQ9NPI6 582 aaPredicted RBP14.77□□□□□ -0.04
SPTLC2-201ENST00000216484 ARHGEF12Q9NZN5 1544 aa14.77□□□□□ -0.04
SPTLC2-201ENST00000216484 MOXD2PA6NHM9 499 aa14.77□□□□□ -0.05
SPTLC2-201ENST00000216484 MYMKA6NI61 221 aa14.77□□□□□ -0.05
SPTLC2-201ENST00000216484 ERVV-1B6SEH8 477 aa14.77□□□□□ -0.05
SPTLC2-201ENST00000216484 KDM4BO94953 1096 aa14.77□□□□□ -0.05
SPTLC2-201ENST00000216484 CST1P01037 141 aa14.77□□□□□ -0.05
SPTLC2-201ENST00000216484 DNAJB14Q8TBM8 379 aa14.77□□□□□ -0.05
SPTLC2-201ENST00000216484 OMDQ99983 421 aa14.77□□□□□ -0.05
SPTLC2-201ENST00000216484 C2CD2Q9Y426 696 aa14.77□□□□□ -0.05
SPTLC2-201ENST00000216484 ZNF780BQ9Y6R6 833 aa14.77□□□□□ -0.05
SPTLC2-201ENST00000216484 A0A087WZ62 844 aa14.77□□□□□ -0.05
SPTLC2-201ENST00000216484 C17orf102A2RUQ5 167 aa14.77□□□□□ -0.05
SPTLC2-201ENST00000216484 ITGA2P17301 1181 aa14.77□□□□□ -0.05
SPTLC2-201ENST00000216484 GRK5P34947 590 aa14.77□□□□□ -0.05
SPTLC2-201ENST00000216484 TNK2Q07912 1038 aa14.77□□□□□ -0.05
SPTLC2-201ENST00000216484 OGFRL1Q5TC84 451 aaPredicted RBP14.77□□□□□ -0.05
SPTLC2-201ENST00000216484 ANKRD26P1Q6NSI1 321 aa14.77□□□□□ -0.05
SPTLC2-201ENST00000216484 SLC47A2Q86VL8 602 aa14.77□□□□□ -0.05
SPTLC2-201ENST00000216484 C12orf56Q8IXR9 622 aa14.77□□□□□ -0.05
SPTLC2-201ENST00000216484 KLHL5Q96PQ7 755 aa14.77□□□□□ -0.05
SPTLC2-201ENST00000216484 TPK1Q9H3S4 243 aa14.77□□□□□ -0.05
SPTLC2-201ENST00000216484 PLEKHA1Q9HB21 404 aa14.77□□□□□ -0.05
SPTLC2-201ENST00000216484 PRDM8Q9NQV8 689 aa14.77□□□□□ -0.05
SPTLC2-201ENST00000216484 RGSL1A5PLK6 1076 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms