RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 DCDC2CA8MYV0 355 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 ASNA1O43681 348 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 EGFRP00533 1210 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 MT-ND1P03886 318 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 DBTP11182 482 aaKnown RBP13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 CRABP2P29373 138 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 MARSP56192 900 aaKnown RBP13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 MTX3Q5HYI7 312 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 MOXD1Q6UVY6 613 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 ANKS1BQ7Z6G8 1248 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 CDYL2Q8N8U2 506 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 KLHL5Q96PQ7 755 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 EMILIN2Q9BXX0 1053 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 CYP3A43Q9HB55 503 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 POPDC2Q9HBU9 364 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 OPTCQ9UBM4 332 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 FRMPD4Q14CM0 1322 aa13.78□□□□□ -0.2
TGFBR3-201ENST00000212355 FFAR2O15552 330 aa13.77□□□□□ -0.2
TGFBR3-201ENST00000212355 OR6B1O95007 311 aa13.77□□□□□ -0.2
TGFBR3-201ENST00000212355 VAV1P15498 845 aa13.77□□□□□ -0.2
TGFBR3-201ENST00000212355 SERPINH1P50454 418 aaKnown RBP13.77□□□□□ -0.2
TGFBR3-201ENST00000212355 CCL23P55773 120 aa13.77□□□□□ -0.2
TGFBR3-201ENST00000212355 SGCGQ13326 291 aa13.77□□□□□ -0.2
TGFBR3-201ENST00000212355 C1DQ13901 141 aaKnown RBP13.77□□□□□ -0.2
TGFBR3-201ENST00000212355 C1orf186Q6ZWK4 172 aa13.77□□□□□ -0.2
TGFBR3-201ENST00000212355 ZNF605Q86T29 641 aa13.77□□□□□ -0.2
TGFBR3-201ENST00000212355 CYP4X1Q8N118 509 aa13.77□□□□□ -0.2
TGFBR3-201ENST00000212355 CAMKK1Q8N5S9 505 aa13.77□□□□□ -0.2
TGFBR3-201ENST00000212355 UBA2Q9UBT2 640 aaPredicted RBP13.77□□□□□ -0.2
TGFBR3-201ENST00000212355 IPPQ9Y573 584 aa13.77□□□□□ -0.2
TGFBR3-201ENST00000212355 TMEM114B3SHH9 223 aa13.77□□□□□ -0.2
TGFBR3-201ENST00000212355 KCNH1O95259 989 aa13.77□□□□□ -0.2
TGFBR3-201ENST00000212355 IL1R1P14778 569 aa13.77□□□□□ -0.2
TGFBR3-201ENST00000212355 VCLP18206 1134 aa13.77□□□□□ -0.2
TGFBR3-201ENST00000212355 RPS12P25398 132 aaKnown RBP13.77□□□□□ -0.2
TGFBR3-201ENST00000212355 NEK3P51956 506 aa13.77□□□□□ -0.2
TGFBR3-201ENST00000212355 RPL38P63173 70 aaKnown RBP13.77□□□□□ -0.2
TGFBR3-201ENST00000212355 ACVR2BQ13705 512 aa13.77□□□□□ -0.2
TGFBR3-201ENST00000212355 BTN2A1Q7KYR7 527 aa13.77□□□□□ -0.2
TGFBR3-201ENST00000212355 RBM23Q86U06 439 aaKnown RBP13.77□□□□□ -0.2
TGFBR3-201ENST00000212355 MTMR9Q96QG7 549 aa13.77□□□□□ -0.2
TGFBR3-201ENST00000212355 ZNF184Q99676 751 aaPredicted RBP13.77□□□□□ -0.2
TGFBR3-201ENST00000212355 RBAK-RBAKDNI3L0D1 243 aa13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 MYL12BO14950 172 aa13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 PTPN1P18031 435 aaKnown RBP13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 S100A3P33764 101 aa13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 PTSQ03393 145 aa13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 SETMARQ53H47 684 aaPredicted RBP13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 GPR107Q5VW38 600 aa13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 RCN3Q96D15 328 aa13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 TCRBV7S2A1N4TA0A589 114 aa13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 IQCF5A8MTL0 148 aa13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 MSI1O43347 362 aaKnown RBP13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 NRP2O60462 931 aa13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 LGALS2P05162 132 aa13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 COX4I1P13073 169 aa13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 NR4A1P22736 598 aa13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 BTG3Q14201 252 aaPredicted RBP13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 DHRSXQ8N5I4 330 aa13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 BTBD9Q96Q07 612 aa13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 AAASQ9NRG9 546 aa13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 TBL1XO60907 577 aa13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 KRT6AP02538 564 aa13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 KRT6BP04259 564 aa13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 TALDO1P37837 337 aa13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 KRT6CP48668 564 aa13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 CDH13P55290 713 aa13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 STX4Q12846 297 aa13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 LDLRAP1Q5SW96 308 aa13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 ZNF438Q7Z4V0 828 aa13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 HIPK1Q86Z02 1210 aa13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 CD302Q8IX05 232 aa13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 ST13P5Q8NFI4 369 aaPredicted RBP13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 SPOCK2Q92563 424 aa13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 PCDHGA4Q9Y5G9 962 aa13.77□□□□□ -0.21
TGFBR3-201ENST00000212355 DIP2BQ9P265 1576 aa13.76□□□□□ -0.21
TGFBR3-201ENST00000212355 SLCO1B7G3V0H7 640 aa13.76□□□□□ -0.21
TGFBR3-201ENST00000212355 TNFAIP8O95379 198 aa13.76□□□□□ -0.21
TGFBR3-201ENST00000212355 UBA1P22314 1058 aaKnown RBP13.76□□□□□ -0.21
TGFBR3-201ENST00000212355 PSEN2P49810 448 aa13.76□□□□□ -0.21
TGFBR3-201ENST00000212355 RENBPP51606 427 aa13.76□□□□□ -0.21
TGFBR3-201ENST00000212355 FMO1Q01740 532 aa13.76□□□□□ -0.21
TGFBR3-201ENST00000212355 RAPSNQ13702 412 aa13.76□□□□□ -0.21
TGFBR3-201ENST00000212355 VGLL4Q14135 290 aa13.76□□□□□ -0.21
TGFBR3-201ENST00000212355 ARHGAP36Q6ZRI8 547 aa13.76□□□□□ -0.21
TGFBR3-201ENST00000212355 HELQQ8TDG4 1101 aa13.76□□□□□ -0.21
TGFBR3-201ENST00000212355 FAM198AQ9UFP1 575 aa13.76□□□□□ -0.21
TGFBR3-201ENST00000212355 SLC12A4Q9UP95 1085 aa13.76□□□□□ -0.21
TGFBR3-201ENST00000212355 RBMX2Q9Y388 322 aaKnown RBP13.76□□□□□ -0.21
TGFBR3-201ENST00000212355 CCL22O00626 93 aa13.76□□□□□ -0.21
TGFBR3-201ENST00000212355 SNPHO15079 494 aa13.76□□□□□ -0.21
TGFBR3-201ENST00000212355 CNPP09543 421 aaKnown RBP13.76□□□□□ -0.21
TGFBR3-201ENST00000212355 PTPRAP18433 802 aa13.76□□□□□ -0.21
TGFBR3-201ENST00000212355 ARF5P84085 180 aa13.76□□□□□ -0.21
TGFBR3-201ENST00000212355 VWA5B1Q5TIE3 1220 aa13.76□□□□□ -0.21
TGFBR3-201ENST00000212355 ATG14Q6ZNE5 492 aa13.76□□□□□ -0.21
TGFBR3-201ENST00000212355 RBM44Q6ZP01 1051 aaKnown RBP13.76□□□□□ -0.21
TGFBR3-201ENST00000212355 GK5Q6ZS86 529 aa13.76□□□□□ -0.21
TGFBR3-201ENST00000212355 FAM124AQ86V42 546 aa13.76□□□□□ -0.21
TGFBR3-201ENST00000212355 POMGNT2Q8NAT1 580 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms