RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 SDHAF4Q5VUM1 108 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 ITPRIPL1Q6GPH6 555 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 EPGNQ6UW88 154 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 CYS1Q717R9 158 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 TMEM209Q96SK2 561 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 GBA3Q9H227 469 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 COPS7BQ9H9Q2 264 aaPredicted RBP8.42□□□□□ -1.06
CDC27-201ENST00000066544 CASS4Q9NQ75 786 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 TIMM44O43615 452 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 MAXP61244 160 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 MSLNQ13421 630 aaPredicted RBP8.42□□□□□ -1.06
CDC27-201ENST00000066544 CSHL1Q14406 222 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 ZNF470Q6ECI4 717 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 CEP97Q8IW35 865 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 FBXW8Q8N3Y1 598 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 PPP2R3CQ969Q6 453 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 PHF21BQ96EK2 531 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 TEKT5Q96M29 485 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 KLHL4Q9C0H6 718 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 C1orf21Q9H246 121 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 ADA2Q9NZK5 511 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 SORCS3Q9UPU3 1222 aa8.42□□□□□ -1.06
CDC27-201ENST00000066544 ATP6AP2A0A1C7CYW4 349 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 HDAC3O15379 428 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 CCNT2O60583 730 aaKnown RBP8.41□□□□□ -1.06
CDC27-201ENST00000066544 ATP6AP2O75787 350 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 TOMM70O94826 608 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 IRX1P78414 480 aaPredicted RBP8.41□□□□□ -1.06
CDC27-201ENST00000066544 CDH17Q12864 832 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 ART3Q13508 389 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 FLOT2Q14254 428 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 ANO4Q32M45 955 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 PLEKHH3Q7Z736 793 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 SPATA24Q86W54 205 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 ZC3HC1Q86WB0 502 aaKnown RBP8.41□□□□□ -1.06
CDC27-201ENST00000066544 ACTRT2Q8TDY3 377 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 ACOT9Q9Y305 439 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 TLL2Q9Y6L7 1015 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 SMIM35A0A1B0GVV1 85 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 F8W810 466 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 STRNO43815 780 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 DLX3O60479 287 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 F2P00734 622 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 ATP6V1B1P15313 513 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 CXCR3P49682 368 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 PGFP49763 221 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 RPL14P50914 215 aaKnown RBP8.41□□□□□ -1.06
CDC27-201ENST00000066544 SLC12A2P55011 1212 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 TAS2R39P59534 338 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 PRPSAP1Q14558 356 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 PGM2L1Q6PCE3 622 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 TFAP2DQ7Z6R9 452 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 NT5C3BQ969T7 300 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 MYLPFQ96A32 169 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 SLC2A13Q96QE2 648 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 DTNAQ9Y4J8 743 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 OR6B1O95007 311 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 PGK1P00558 417 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 OR4Q2P0C623 313 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 KCNE1P15382 129 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 VCLP18206 1134 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 WARSP23381 471 aaKnown RBP8.41□□□□□ -1.06
CDC27-201ENST00000066544 SCNN1AP37088 669 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 IQSEC1Q6DN90 963 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 ACAD11Q709F0 780 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 SCN4BQ8IWT1 228 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 DSELQ8IZU8 1212 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 RYBPQ8N488 228 aaPredicted RBP8.41□□□□□ -1.06
CDC27-201ENST00000066544 ATPAF2Q8N5M1 289 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 TOP6BLQ8N6T0 577 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 PIP4K2CQ8TBX8 421 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 DQX1Q8TE96 717 aaKnown RBP8.41□□□□□ -1.06
CDC27-201ENST00000066544 ZNF419Q96HQ0 510 aaPredicted RBP8.41□□□□□ -1.06
CDC27-201ENST00000066544 FSD1LQ9BXM9 530 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 GPAMQ9HCL2 828 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 RBM22Q9NW64 420 aaKnown RBP eCLIP8.41□□□□□ -1.064e-7■■■■□ 23.3
CDC27-201ENST00000066544 OXSMQ9NWU1 459 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 APPL1Q9UKG1 709 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 MTF2Q9Y483 593 aaPredicted RBP8.41□□□□□ -1.06
CDC27-201ENST00000066544 FAM95CA0A1B0GW59 222 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 TRPA1O75762 1119 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 SOX11P35716 441 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 NME5P56597 212 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 TIGD5Q53EQ6 642 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 CMPK2Q5EBM0 449 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 ZNF789Q5FWF6 425 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 NAPEPLDQ6IQ20 393 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 IYDQ6PHW0 289 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 IL22Q9GZX6 179 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 FLRT1Q9NZU1 646 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 PCDHGB4Q9UN71 923 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 PCDHGB5Q9Y5G0 923 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 RBM47A0AV96 593 aaKnown RBP8.41□□□□□ -1.06
CDC27-201ENST00000066544 SLC35E2BP0CK96 405 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 NELFEP18615 380 aaKnown RBP8.41□□□□□ -1.06
CDC27-201ENST00000066544 CRABP2P29373 138 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 CDK7P50613 346 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 SH2D4BQ5SQS7 431 aa8.41□□□□□ -1.06
CDC27-201ENST00000066544 RBM20Q5T481 1227 aaKnown RBP8.41□□□□□ -1.06
CDC27-201ENST00000066544 STXBP5Q5T5C0 1151 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms