RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 CYP2R1Q6VVX0 501 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 ZYG11AQ6WRX3 759 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 CEP97Q8IW35 865 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 TTC39CQ8N584 583 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 TMEM102Q8N9M5 508 aaPredicted RBP14.25□□□□□ -0.13
USH1C-201ENST00000005226 FAM110BQ8TC76 370 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 LRTOMTQ8WZ04 291 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 RBM38Q9H0Z9 239 aaKnown RBP14.25□□□□□ -0.13
USH1C-201ENST00000005226 Q9H521 79 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 CASS4Q9NQ75 786 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 SETD4Q9NVD3 440 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 RBPJLQ9UBG7 517 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 RAB26Q9ULW5 256 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 TLL2Q9Y6L7 1015 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 ACOT8O14734 319 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 JCHAINP01591 159 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 AHSGP02765 367 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 SLC5A2P31639 672 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 EPHX2P34913 555 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 SLC26A2P50443 739 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 ARHGAP1Q07960 439 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 MFSD6LQ8IWD5 586 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 CENPLQ8N0S6 344 aaPredicted RBP14.25□□□□□ -0.13
USH1C-201ENST00000005226 PGAM4Q8N0Y7 254 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 LINC01465Q8N7H1 131 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 SPATA22Q8NHS9 363 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 SREK1Q8WXA9 508 aaKnown RBP14.25□□□□□ -0.13
USH1C-201ENST00000005226 RNF39Q9H2S5 420 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 COQ10BQ9H8M1 238 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 PRDM16Q9HAZ2 1276 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 RHBDL2Q9NX52 303 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 PTTG2Q9NZH5 202 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 XPR1Q9UBH6 696 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 RNF11Q9Y3C5 154 aa14.25□□□□□ -0.13
USH1C-201ENST00000005226 PRSS51A0A1B0GVH4 220 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 XPO1O14980 1071 aaKnown RBP14.24□□□□□ -0.13
USH1C-201ENST00000005226 SLC35E2BP0CK96 405 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 CYP2B6P20813 491 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 NSUN2Q08J23 767 aaKnown RBP eCLIP14.24□□□□□ -0.13
USH1C-201ENST00000005226 TTLL4Q14679 1199 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 MGAT5BQ3V5L5 792 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 ZC3HC1Q86WB0 502 aaKnown RBP14.24□□□□□ -0.13
USH1C-201ENST00000005226 OSTM1Q86WC4 334 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 APOBEC3FQ8IUX4 373 aaKnown RBP14.24□□□□□ -0.13
USH1C-201ENST00000005226 EME1Q96AY2 570 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 DTNBP1Q96EV8 351 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 CNDP1Q96KN2 507 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 ZNF385DQ9H6B1 395 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 EFCAB1Q9HAE3 211 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 ZBTB26Q9HCK0 441 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 CYP4F12Q9HCS2 524 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 TNFRSF12AQ9NP84 129 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 LMCD1Q9NZU5 365 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 E7ENX8 843 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 PLOD2O00469 737 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 BCAS2O75934 225 aaPredicted RBP14.24□□□□□ -0.13
USH1C-201ENST00000005226 TNFAIP8O95379 198 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 PGK1P00558 417 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 SCNN1BP51168 640 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 PAFAH1B3Q15102 231 aaKnown RBP14.24□□□□□ -0.13
USH1C-201ENST00000005226 PITRM1Q5JRX3 1037 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 SH2D4BQ5SQS7 431 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 TSTD2Q5T7W7 516 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 NT5DC4Q86YG4 428 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 RNF135Q8IUD6 432 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 MYO1HQ8N1T3 1032 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 ADCY4Q8NFM4 1077 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 BEST2Q8NFU1 509 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 CEP70Q8NHQ1 597 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 SNX27Q96L92 541 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 NPY6RQ99463 290 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 SLC29A1Q99808 456 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 MRPS26Q9BYN8 205 aaKnown RBP14.24□□□□□ -0.13
USH1C-201ENST00000005226 EPB41L1Q9H4G0 881 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 GTSE1Q9NYZ3 720 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 NDUFA13Q9P0J0 144 aa14.24□□□□□ -0.13
USH1C-201ENST00000005226 C9IYK1 514 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 TIMM44O43615 452 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 RECQL4O94761 1208 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 FYNP06241 537 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 FAM200BP0CF97 657 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 GJA9P57773 515 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 SOX4Q06945 474 aaPredicted RBP14.23□□□□□ -0.13
USH1C-201ENST00000005226 PRKAA1Q13131 559 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 PTK2BQ14289 1009 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 POU6F1Q14863 301 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 ZBTB6Q15916 424 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 DGKDQ16760 1214 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 PPP1R3AQ16821 1122 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 ANO4Q32M45 955 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 FBXO47Q5MNV8 452 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 KCTD11Q693B1 232 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 CNSTQ6PJW8 725 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 UNC93AQ86WB7 457 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 CRYBG2Q8N1P7 616 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 KDM1BQ8NB78 822 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 CAMKK2Q96RR4 588 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 DDHD2O94830 711 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 CYP2C8P10632 490 aa14.23□□□□□ -0.13
USH1C-201ENST00000005226 CDK4P11802 303 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms